RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.95
CTSA-212ENST00000606394 HDGFP51858 240 aaKnown RBP20.93■□□□□ 0.94
CTSA-212ENST00000606394 BCANQ96GW7 911 aa20.93■□□□□ 0.94
CTSA-212ENST00000606394 SPATA31A6Q5VVP1 1343 aa20.93■□□□□ 0.94
CTSA-212ENST00000606394 PLEKHG1Q9ULL1 1385 aa20.93■□□□□ 0.94
CTSA-212ENST00000606394 FGD6Q6ZV73 1430 aa20.93■□□□□ 0.94
CTSA-212ENST00000606394 RPRD2Q5VT52 1461 aaKnown RBP20.93■□□□□ 0.94
CTSA-212ENST00000606394 CHD2O14647 1828 aaKnown RBP20.92■□□□□ 0.94
CTSA-212ENST00000606394 SETD1AO15047 1707 aaKnown RBP20.91■□□□□ 0.94
CTSA-212ENST00000606394 ZFYVE9O95405 1425 aa20.91■□□□□ 0.94
CTSA-212ENST00000606394 COL16A1Q07092 1604 aaPredicted RBP20.9■□□□□ 0.94
CTSA-212ENST00000606394 ZNF772Q68DY9 489 aaPredicted RBP20.89■□□□□ 0.93
CTSA-212ENST00000606394 TBX22Q9Y458 520 aa20.88■□□□□ 0.93
CTSA-212ENST00000606394 PPP1R15AO75807 674 aaPredicted RBP20.86■□□□□ 0.93
CTSA-212ENST00000606394 CHIC2Q9UKJ5 165 aa20.86■□□□□ 0.93
CTSA-212ENST00000606394 RIMS2Q9UQ26 1411 aa20.86■□□□□ 0.93
CTSA-212ENST00000606394 APLP2Q06481 763 aa20.85■□□□□ 0.93
CTSA-212ENST00000606394 CADPS2Q86UW7 1296 aa20.85■□□□□ 0.93
CTSA-212ENST00000606394 ADGRL2O95490 1459 aa20.85■□□□□ 0.93
CTSA-212ENST00000606394 MEX3CQ5U5Q3 659 aaKnown RBP20.84■□□□□ 0.93
CTSA-212ENST00000606394 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.84■□□□□ 0.93
CTSA-212ENST00000606394 LRP6O75581 1613 aa20.84■□□□□ 0.93
CTSA-212ENST00000606394 AHDC1Q5TGY3 1603 aaPredicted RBP20.84■□□□□ 0.93
CTSA-212ENST00000606394 UPF1Q92900 1129 aaKnown RBP eCLIP20.83■□□□□ 0.93
CTSA-212ENST00000606394 C19orf44Q9H6X5 657 aa20.83■□□□□ 0.93
CTSA-212ENST00000606394 PIK3R4Q99570 1358 aa20.83■□□□□ 0.92
CTSA-212ENST00000606394 TMEM131LA2VDJ0 1609 aa20.82■□□□□ 0.92
CTSA-212ENST00000606394 SHPRHQ149N8 1683 aa20.82■□□□□ 0.92
CTSA-212ENST00000606394 DIP2AQ14689 1571 aa20.81■□□□□ 0.92
CTSA-212ENST00000606394 C14orf37Q86TY3 774 aa20.81■□□□□ 0.92
CTSA-212ENST00000606394 MYO5BQ9ULV0 1848 aa20.81■□□□□ 0.92
CTSA-212ENST00000606394 GCC2Q8IWJ2 1684 aa20.8■□□□□ 0.92
CTSA-212ENST00000606394 ATF3P18847 181 aa20.8■□□□□ 0.92
CTSA-212ENST00000606394 ANKRD50Q9ULJ7 1429 aa20.79■□□□□ 0.92
CTSA-212ENST00000606394 LOC105371045A0A1W2PR82 267 aa20.79■□□□□ 0.92
CTSA-212ENST00000606394 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.78■□□□□ 0.92
CTSA-212ENST00000606394 CDK12Q9NYV4 1490 aaPredicted RBP20.78■□□□□ 0.92
CTSA-212ENST00000606394 ADAMTS13Q76LX8 1427 aa20.78■□□□□ 0.92
CTSA-212ENST00000606394 RXRBP28702 533 aa20.77■□□□□ 0.92
CTSA-212ENST00000606394 TRIM52Q96A61 297 aa20.76■□□□□ 0.91
CTSA-212ENST00000606394 DCCP43146 1447 aa20.75■□□□□ 0.91
CTSA-212ENST00000606394 SRCAPQ6ZRS2 3230 aa20.73■□□□□ 0.91
CTSA-212ENST00000606394 BRINP3Q76B58 766 aa20.72■□□□□ 0.91
CTSA-212ENST00000606394 TRPM2O94759 1503 aa20.72■□□□□ 0.91
CTSA-212ENST00000606394 CHGAP10645 457 aaKnown RBP20.7■□□□□ 0.9
CTSA-212ENST00000606394 SETD5Q9C0A6 1442 aa20.7■□□□□ 0.9
CTSA-212ENST00000606394 UNC13BO14795 1591 aa20.69■□□□□ 0.9
CTSA-212ENST00000606394 AMOTL2Q9Y2J4 779 aa20.69■□□□□ 0.9
CTSA-212ENST00000606394 ASXL1Q8IXJ9 1541 aa20.67■□□□□ 0.9
CTSA-212ENST00000606394 E9PCH4 1651 aa20.66■□□□□ 0.9
CTSA-212ENST00000606394 PTPRUQ92729 1446 aa20.65■□□□□ 0.9
CTSA-212ENST00000606394 AFF2P51816 1311 aa20.65■□□□□ 0.9
CTSA-212ENST00000606394 NUTM2BA6NNL0 878 aaPredicted RBP20.65■□□□□ 0.9
CTSA-212ENST00000606394 NUTM2EB1AL46 878 aaPredicted RBP20.65■□□□□ 0.9
CTSA-212ENST00000606394 FAM50AQ14320 339 aaKnown RBP20.65■□□□□ 0.9
CTSA-212ENST00000606394 NUTM2DQ5VT03 806 aaPredicted RBP20.65■□□□□ 0.9
CTSA-212ENST00000606394 NUTM2AQ8IVF1 878 aaPredicted RBP20.65■□□□□ 0.9
CTSA-212ENST00000606394 LRRC59Q96AG4 307 aaKnown RBP20.65■□□□□ 0.9
CTSA-212ENST00000606394 NHSL1Q5SYE7 1610 aa20.63■□□□□ 0.89
CTSA-212ENST00000606394 MST1RQ04912 1400 aa20.62■□□□□ 0.89
CTSA-212ENST00000606394 XRN1Q8IZH2 1706 aaKnown RBP20.62■□□□□ 0.89
CTSA-212ENST00000606394 IQGAP3Q86VI3 1631 aa20.62■□□□□ 0.89
CTSA-212ENST00000606394 RBM6P78332 1123 aaKnown RBP20.61■□□□□ 0.89
CTSA-212ENST00000606394 SETBP1Q9Y6X0 1596 aa20.6■□□□□ 0.89
CTSA-212ENST00000606394 ROCK1Q13464 1354 aa20.59■□□□□ 0.89
CTSA-212ENST00000606394 QTRT2Q9H974 415 aaKnown RBP20.58■□□□□ 0.89
CTSA-212ENST00000606394 RGS12O14924 1447 aa20.58■□□□□ 0.88
CTSA-212ENST00000606394 NRXN3Q9Y4C0 1643 aa20.57■□□□□ 0.88
CTSA-212ENST00000606394 C8orf37Q96NL8 207 aa20.57■□□□□ 0.88
CTSA-212ENST00000606394 PNPLA6Q8IY17 1366 aa20.57■□□□□ 0.88
CTSA-212ENST00000606394 ADGRL3Q9HAR2 1447 aa20.55■□□□□ 0.88
CTSA-212ENST00000606394 NGLY1Q96IV0 654 aa20.55■□□□□ 0.88
CTSA-212ENST00000606394 NUP155O75694 1391 aa20.55■□□□□ 0.88
CTSA-212ENST00000606394 METP08581 1390 aa20.52■□□□□ 0.88
CTSA-212ENST00000606394 FOXD1Q16676 465 aa20.52■□□□□ 0.88
CTSA-212ENST00000606394 ATAD2Q6PL18 1390 aa20.51■□□□□ 0.87
CTSA-212ENST00000606394 LAMC1P11047 1609 aa20.49■□□□□ 0.87
CTSA-212ENST00000606394 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
CTSA-212ENST00000606394 C1orf167Q5SNV9 1468 aa20.48■□□□□ 0.87
CTSA-212ENST00000606394 SPHKAPQ2M3C7 1700 aa20.47■□□□□ 0.87
CTSA-212ENST00000606394 EP400Q96L91 3159 aa20.47■□□□□ 0.87
CTSA-212ENST00000606394 DDX17Q92841 729 aaKnown RBP20.47■□□□□ 0.87
CTSA-212ENST00000606394 NALCNQ8IZF0 1738 aa20.47■□□□□ 0.87
CTSA-212ENST00000606394 TRPC5Q9UL62 973 aaPredicted RBP20.46■□□□□ 0.87
CTSA-212ENST00000606394 SOS2Q07890 1332 aaPredicted RBP20.46■□□□□ 0.87
CTSA-212ENST00000606394 PTCH1Q13635 1447 aa20.45■□□□□ 0.86
CTSA-212ENST00000606394 ADAMTS2O95450 1211 aa20.45■□□□□ 0.86
CTSA-212ENST00000606394 FNBP4Q8N3X1 1017 aaPredicted RBP20.44■□□□□ 0.86
CTSA-212ENST00000606394 USP21Q9UK80 565 aa20.44■□□□□ 0.86
CTSA-212ENST00000606394 NEXMIFQ5QGS0 1516 aa20.43■□□□□ 0.86
CTSA-212ENST00000606394 CCDC125Q86Z20 511 aa20.41■□□□□ 0.86
CTSA-212ENST00000606394 ZRANB1Q9UGI0 708 aa20.41■□□□□ 0.86
CTSA-212ENST00000606394 PRAG1Q86YV5 1406 aa20.41■□□□□ 0.86
CTSA-212ENST00000606394 ATRNO75882 1429 aa20.39■□□□□ 0.85
CTSA-212ENST00000606394 COL22A1Q8NFW1 1626 aaPredicted RBP20.38■□□□□ 0.85
CTSA-212ENST00000606394 ORAI2Q96SN7 254 aa20.37■□□□□ 0.85
CTSA-212ENST00000606394 VGFO15240 615 aaPredicted RBP20.36■□□□□ 0.85
CTSA-212ENST00000606394 ROBO2Q9HCK4 1378 aa20.35■□□□□ 0.85
CTSA-212ENST00000606394 CLTCL1P53675 1640 aa20.35■□□□□ 0.85
CTSA-212ENST00000606394 HFM1A2PYH4 1435 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms