RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 IPO9Q96P70 1041 aaKnown RBP8.73□□□□□ -1.01
SRGAP2-211ENST00000604423 BCL2L12Q9HB09 334 aa8.73□□□□□ -1.01
SRGAP2-211ENST00000604423 GRXCR2A6NFK2 248 aa8.72□□□□□ -1.01
SRGAP2-211ENST00000604423 PTPREP23469 700 aa8.72□□□□□ -1.01
SRGAP2-211ENST00000604423 PHLDB1Q86UU1 1377 aa8.72□□□□□ -1.01
SRGAP2-211ENST00000604423 ADGRD1Q6QNK2 874 aa8.71□□□□□ -1.01
SRGAP2-211ENST00000604423 PHF14O94880 888 aa8.71□□□□□ -1.02
SRGAP2-211ENST00000604423 ZBED9Q6R2W3 1325 aa8.71□□□□□ -1.02
SRGAP2-211ENST00000604423 TYW1BQ6NUM6 668 aa8.7□□□□□ -1.02
SRGAP2-211ENST00000604423 IL27Q8NEV9 243 aa8.7□□□□□ -1.02
SRGAP2-211ENST00000604423 CCDC136Q96JN2 1154 aa8.7□□□□□ -1.02
SRGAP2-211ENST00000604423 CNTLNQ9NXG0 1405 aa8.69□□□□□ -1.02
SRGAP2-211ENST00000604423 CCDC18Q5T9S5 1454 aa8.69□□□□□ -1.02
SRGAP2-211ENST00000604423 FAM9BQ8IZU0 186 aa8.68□□□□□ -1.02
SRGAP2-211ENST00000604423 PCF11O94913 1555 aaKnown RBP8.68□□□□□ -1.02
SRGAP2-211ENST00000604423 SPDYE16A6NNV3 312 aaPredicted RBP8.68□□□□□ -1.02
SRGAP2-211ENST00000604423 RNF166Q96A37 237 aaPredicted RBP8.68□□□□□ -1.02
SRGAP2-211ENST00000604423 NCOA2Q15596 1464 aa8.68□□□□□ -1.02
SRGAP2-211ENST00000604423 ATAD2BQ9ULI0 1458 aa8.68□□□□□ -1.02
SRGAP2-211ENST00000604423 FBXW7Q969H0 707 aa8.67□□□□□ -1.02
SRGAP2-211ENST00000604423 MRS2Q9HD23 443 aa8.67□□□□□ -1.02
SRGAP2-211ENST00000604423 UACAQ9BZF9 1416 aa8.66□□□□□ -1.02
SRGAP2-211ENST00000604423 MAP3K7O43318 606 aa8.66□□□□□ -1.02
SRGAP2-211ENST00000604423 COL9A1P20849 921 aa8.66□□□□□ -1.02
SRGAP2-211ENST00000604423 KDM2AQ9Y2K7 1162 aa8.66□□□□□ -1.02
SRGAP2-211ENST00000604423 ARIH1Q9Y4X5 557 aaPredicted RBP8.66□□□□□ -1.02
SRGAP2-211ENST00000604423 PTGER2P43116 358 aa8.66□□□□□ -1.02
SRGAP2-211ENST00000604423 TSR1Q2NL82 804 aaKnown RBP8.66□□□□□ -1.02
SRGAP2-211ENST00000604423 UBE2Q2Q8WVN8 375 aa8.66□□□□□ -1.02
SRGAP2-211ENST00000604423 EPAS1Q99814 870 aa8.66□□□□□ -1.02
SRGAP2-211ENST00000604423 USP35Q9P2H5 1018 aa8.66□□□□□ -1.02
SRGAP2-211ENST00000604423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.65□□□□□ -1.02
SRGAP2-211ENST00000604423 WASHC2AQ641Q2 1341 aa8.65□□□□□ -1.02
SRGAP2-211ENST00000604423 C6orf132Q5T0Z8 1188 aa8.65□□□□□ -1.02
SRGAP2-211ENST00000604423 VPS9D1Q9Y2B5 631 aa8.65□□□□□ -1.02
SRGAP2-211ENST00000604423 CUX1P39880 1505 aa8.65□□□□□ -1.02
SRGAP2-211ENST00000604423 PTPN23Q9H3S7 1636 aa8.65□□□□□ -1.03
SRGAP2-211ENST00000604423 NEFMP07197 916 aa8.64□□□□□ -1.03
SRGAP2-211ENST00000604423 PROX2Q3B8N5 592 aa8.64□□□□□ -1.03
SRGAP2-211ENST00000604423 ARHGEF1Q92888 912 aaKnown RBP8.64□□□□□ -1.03
SRGAP2-211ENST00000604423 PRIM1P49642 420 aaKnown RBP8.64□□□□□ -1.03
SRGAP2-211ENST00000604423 ZBED2Q9BTP6 218 aa8.64□□□□□ -1.03
SRGAP2-211ENST00000604423 TK2O00142 265 aa8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 MLLT3P42568 568 aaPredicted RBP8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 EIF4G2P78344 907 aaKnown RBP eCLIP8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 EN1Q05925 392 aaPredicted RBP8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 NPM2Q86SE8 214 aaKnown RBP8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 P3H3Q8IVL6 736 aa8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 ATP1B4Q9UN42 357 aaPredicted RBP8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 SMG6Q86US8 1419 aaKnown RBP8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 PPP1R3GB7ZBB8 358 aa8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 HRO43593 1189 aa8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 HSPA5P11021 654 aaKnown RBP8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 STAC3Q96MF2 364 aa8.63□□□□□ -1.03
SRGAP2-211ENST00000604423 POLR1AO95602 1720 aaPredicted RBP8.62□□□□□ -1.03
SRGAP2-211ENST00000604423 NCAPD3P42695 1498 aa8.62□□□□□ -1.03
SRGAP2-211ENST00000604423 PPM1GO15355 546 aaPredicted RBP8.62□□□□□ -1.03
SRGAP2-211ENST00000604423 PRKRIP1Q9H875 184 aaPredicted RBP8.62□□□□□ -1.03
SRGAP2-211ENST00000604423 HFM1A2PYH4 1435 aa8.62□□□□□ -1.03
SRGAP2-211ENST00000604423 AKNAQ7Z591 1439 aa8.62□□□□□ -1.03
SRGAP2-211ENST00000604423 BICRAQ9NZM4 1560 aa8.62□□□□□ -1.03
SRGAP2-211ENST00000604423 FYCO1Q9BQS8 1478 aa8.62□□□□□ -1.03
SRGAP2-211ENST00000604423 NUDCQ9Y266 331 aa8.61□□□□□ -1.03
SRGAP2-211ENST00000604423 LAS1LQ9Y4W2 734 aaKnown RBP8.61□□□□□ -1.03
SRGAP2-211ENST00000604423 FGD6Q6ZV73 1430 aa8.6□□□□□ -1.03
SRGAP2-211ENST00000604423 KDM5BQ9UGL1 1544 aa8.6□□□□□ -1.03
SRGAP2-211ENST00000604423 HECW1Q76N89 1606 aa8.6□□□□□ -1.03
SRGAP2-211ENST00000604423 SEMA3EO15041 775 aa8.6□□□□□ -1.03
SRGAP2-211ENST00000604423 CCDC184Q52MB2 194 aa8.6□□□□□ -1.03
SRGAP2-211ENST00000604423 C11orf95C9JLR9 678 aaPredicted RBP8.59□□□□□ -1.03
SRGAP2-211ENST00000604423 EIF5BO60841 1220 aaKnown RBP8.59□□□□□ -1.03
SRGAP2-211ENST00000604423 OSBPP22059 807 aa8.59□□□□□ -1.03
SRGAP2-211ENST00000604423 CDHR5Q9HBB8 845 aa8.59□□□□□ -1.03
SRGAP2-211ENST00000604423 FMN1Q68DA7 1419 aa8.59□□□□□ -1.03
SRGAP2-211ENST00000604423 ABCA5Q8WWZ7 1642 aa8.59□□□□□ -1.03
SRGAP2-211ENST00000604423 KCTD12Q96CX2 325 aaKnown RBP8.59□□□□□ -1.03
SRGAP2-211ENST00000604423 CCDC7Q96M83 1385 aa8.58□□□□□ -1.04
SRGAP2-211ENST00000604423 NCOA1Q15788 1441 aa8.58□□□□□ -1.04
SRGAP2-211ENST00000604423 WASHC2CQ9Y4E1 1318 aa8.58□□□□□ -1.04
SRGAP2-211ENST00000604423 EFCAB5A4FU69 1503 aa8.57□□□□□ -1.04
SRGAP2-211ENST00000604423 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
SRGAP2-211ENST00000604423 TCERG1O14776 1098 aaKnown RBP8.56□□□□□ -1.04
SRGAP2-211ENST00000604423 PRDM2Q13029 1718 aa8.56□□□□□ -1.04
SRGAP2-211ENST00000604423 MRPL50Q8N5N7 158 aaKnown RBP8.56□□□□□ -1.04
SRGAP2-211ENST00000604423 SLC4A5Q9BY07 1137 aa8.56□□□□□ -1.04
SRGAP2-211ENST00000604423 GCC2Q8IWJ2 1684 aa8.56□□□□□ -1.04
SRGAP2-211ENST00000604423 SEPT9Q9UHD8 586 aaPredicted RBP8.56□□□□□ -1.04
SRGAP2-211ENST00000604423 RNF123Q5XPI4 1314 aa8.55□□□□□ -1.04
SRGAP2-211ENST00000604423 NAIPQ13075 1403 aa8.55□□□□□ -1.04
SRGAP2-211ENST00000604423 CASKIN1Q8WXD9 1431 aa8.55□□□□□ -1.04
SRGAP2-211ENST00000604423 BHMG1C9JSJ3 638 aaPredicted RBP8.55□□□□□ -1.04
SRGAP2-211ENST00000604423 KIAA1468Q9P260 1216 aa8.55□□□□□ -1.04
SRGAP2-211ENST00000604423 AQRO60306 1485 aaKnown RBP eCLIP8.55□□□□□ -1.04
SRGAP2-211ENST00000604423 CARMIL1Q5VZK9 1371 aa8.55□□□□□ -1.04
SRGAP2-211ENST00000604423 NBPF3Q9H094 633 aa8.54□□□□□ -1.04
SRGAP2-211ENST00000604423 FHOD3Q2V2M9 1422 aa8.54□□□□□ -1.04
SRGAP2-211ENST00000604423 FGD5Q6ZNL6 1462 aa8.54□□□□□ -1.04
SRGAP2-211ENST00000604423 GOLGA8CPA6NN73 597 aa8.54□□□□□ -1.04
SRGAP2-211ENST00000604423 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
SRGAP2-211ENST00000604423 RABGEF1Q9UJ41 708 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms