RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 RNF17Q9BXT8 1623 aaKnown RBP19.84■□□□□ 0.77
LYSMD4-211ENST00000604213 RGS3P49796 1198 aa19.84■□□□□ 0.77
LYSMD4-211ENST00000604213 FBLN2P98095 1184 aa19.84■□□□□ 0.77
LYSMD4-211ENST00000604213 PREX2Q70Z35 1606 aa19.83■□□□□ 0.77
LYSMD4-211ENST00000604213 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.76
LYSMD4-211ENST00000604213 ATP10AO60312 1499 aa19.82■□□□□ 0.76
LYSMD4-211ENST00000604213 MAST1Q9Y2H9 1570 aa19.82■□□□□ 0.76
LYSMD4-211ENST00000604213 EIF3AQ14152 1382 aaKnown RBP19.81■□□□□ 0.76
LYSMD4-211ENST00000604213 PIK3C2GO75747 1445 aa19.79■□□□□ 0.76
LYSMD4-211ENST00000604213 SYCP2Q9BX26 1530 aa19.79■□□□□ 0.76
LYSMD4-211ENST00000604213 SPINK5Q9NQ38 1064 aaPredicted RBP19.77■□□□□ 0.76
LYSMD4-211ENST00000604213 USP19O94966 1318 aa19.76■□□□□ 0.75
LYSMD4-211ENST00000604213 NKTRP30414 1462 aaKnown RBP19.76■□□□□ 0.75
LYSMD4-211ENST00000604213 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
LYSMD4-211ENST00000604213 SYNMO15061 1565 aa19.76■□□□□ 0.75
LYSMD4-211ENST00000604213 BCAR3O75815 825 aa19.75■□□□□ 0.75
LYSMD4-211ENST00000604213 CCDC146Q8IYE0 955 aa19.75■□□□□ 0.75
LYSMD4-211ENST00000604213 IQGAP1P46940 1657 aa19.75■□□□□ 0.75
LYSMD4-211ENST00000604213 PLXNC1O60486 1568 aa19.74■□□□□ 0.75
LYSMD4-211ENST00000604213 ABCC2Q92887 1545 aa19.74■□□□□ 0.75
LYSMD4-211ENST00000604213 IGHDP01880 384 aa19.74■□□□□ 0.75
LYSMD4-211ENST00000604213 NPC1L1Q9UHC9 1359 aa19.74■□□□□ 0.75
LYSMD4-211ENST00000604213 CDCA8Q53HL2 280 aa19.72■□□□□ 0.75
LYSMD4-211ENST00000604213 MADDQ8WXG6 1647 aa19.72■□□□□ 0.75
LYSMD4-211ENST00000604213 APAF1O14727 1248 aa19.72■□□□□ 0.75
LYSMD4-211ENST00000604213 VIRMAQ69YN4 1812 aaKnown RBP19.72■□□□□ 0.75
LYSMD4-211ENST00000604213 ARHGAP5Q13017 1502 aa19.7■□□□□ 0.74
LYSMD4-211ENST00000604213 E9PSI1 815 aa19.7■□□□□ 0.74
LYSMD4-211ENST00000604213 DUOX2Q9NRD8 1548 aa19.7■□□□□ 0.74
LYSMD4-211ENST00000604213 FAM43AQ8N2R8 423 aa19.69■□□□□ 0.74
LYSMD4-211ENST00000604213 SCAF11Q99590 1463 aaKnown RBP19.69■□□□□ 0.74
LYSMD4-211ENST00000604213 TTC37Q6PGP7 1564 aa19.68■□□□□ 0.74
LYSMD4-211ENST00000604213 CGNL1Q0VF96 1302 aa19.68■□□□□ 0.74
LYSMD4-211ENST00000604213 ERCC6Q03468 1493 aa19.68■□□□□ 0.74
LYSMD4-211ENST00000604213 SEC24BO95487 1268 aa19.68■□□□□ 0.74
LYSMD4-211ENST00000604213 PDE3AQ14432 1141 aa19.68■□□□□ 0.74
LYSMD4-211ENST00000604213 DMRT2Q9Y5R5 561 aa19.68■□□□□ 0.74
LYSMD4-211ENST00000604213 MYOM1P52179 1685 aa19.67■□□□□ 0.74
LYSMD4-211ENST00000604213 SCAPERQ9BY12 1400 aa19.66■□□□□ 0.74
LYSMD4-211ENST00000604213 MAPK8IP3Q9UPT6 1336 aa19.66■□□□□ 0.74
LYSMD4-211ENST00000604213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.65■□□□□ 0.74
LYSMD4-211ENST00000604213 NLRP1Q9C000 1473 aa19.64■□□□□ 0.74
LYSMD4-211ENST00000604213 CLUAP1Q96AJ1 413 aa19.64■□□□□ 0.74
LYSMD4-211ENST00000604213 POGKQ9P215 609 aa19.64■□□□□ 0.74
LYSMD4-211ENST00000604213 NINLQ9Y2I6 1382 aa19.64■□□□□ 0.73
LYSMD4-211ENST00000604213 NGEFQ8N5V2 710 aa19.64■□□□□ 0.73
LYSMD4-211ENST00000604213 BECN1Q14457 450 aa19.63■□□□□ 0.73
LYSMD4-211ENST00000604213 PANK1Q8TE04 598 aa19.62■□□□□ 0.73
LYSMD4-211ENST00000604213 CENPJQ9HC77 1338 aaPredicted RBP19.61■□□□□ 0.73
LYSMD4-211ENST00000604213 SPHKAPQ2M3C7 1700 aa19.61■□□□□ 0.73
LYSMD4-211ENST00000604213 COG6Q9Y2V7 657 aa19.61■□□□□ 0.73
LYSMD4-211ENST00000604213 STAC3Q96MF2 364 aa19.6■□□□□ 0.73
LYSMD4-211ENST00000604213 ANTXR1Q9H6X2 564 aa19.6■□□□□ 0.73
LYSMD4-211ENST00000604213 RSPH6AQ9H0K4 717 aa19.59■□□□□ 0.73
LYSMD4-211ENST00000604213 TRPM2O94759 1503 aa19.58■□□□□ 0.73
LYSMD4-211ENST00000604213 EIF5BO60841 1220 aaKnown RBP19.58■□□□□ 0.72
LYSMD4-211ENST00000604213 SLKQ9H2G2 1235 aaPredicted RBP19.58■□□□□ 0.72
LYSMD4-211ENST00000604213 KDM5AP29375 1690 aaKnown RBP19.58■□□□□ 0.72
LYSMD4-211ENST00000604213 WWC1Q8IX03 1113 aa19.57■□□□□ 0.72
LYSMD4-211ENST00000604213 UBE2Q2Q8WVN8 375 aa19.57■□□□□ 0.72
LYSMD4-211ENST00000604213 CANXP27824 592 aaKnown RBP19.57■□□□□ 0.72
LYSMD4-211ENST00000604213 CARD14Q9BXL6 1004 aa19.56■□□□□ 0.72
LYSMD4-211ENST00000604213 PTPRTO14522 1441 aa19.55■□□□□ 0.72
LYSMD4-211ENST00000604213 CEP152O94986 1710 aa19.55■□□□□ 0.72
LYSMD4-211ENST00000604213 TBC1D32Q96NH3 1257 aa19.54■□□□□ 0.72
LYSMD4-211ENST00000604213 ZMYM3Q14202 1370 aa19.54■□□□□ 0.72
LYSMD4-211ENST00000604213 CLTCL1P53675 1640 aa19.54■□□□□ 0.72
LYSMD4-211ENST00000604213 PMFBP1Q8TBY8 1022 aa19.54■□□□□ 0.72
LYSMD4-211ENST00000604213 ERVK-7P63135 1459 aa19.53■□□□□ 0.72
LYSMD4-211ENST00000604213 L1TD1Q5T7N2 865 aaKnown RBP19.53■□□□□ 0.72
LYSMD4-211ENST00000604213 POLR3AO14802 1390 aaPredicted RBP19.53■□□□□ 0.72
LYSMD4-211ENST00000604213 AAMPQ13685 434 aa19.52■□□□□ 0.72
LYSMD4-211ENST00000604213 PCDHB15Q9Y5E8 787 aa19.52■□□□□ 0.72
LYSMD4-211ENST00000604213 RARSP54136 660 aaKnown RBP19.52■□□□□ 0.72
LYSMD4-211ENST00000604213 KIAA1210Q9ULL0 1709 aa19.51■□□□□ 0.71
LYSMD4-211ENST00000604213 TBC1D2Q9BYX2 928 aa19.51■□□□□ 0.71
LYSMD4-211ENST00000604213 UPF2Q9HAU5 1272 aaKnown RBP19.5■□□□□ 0.71
LYSMD4-211ENST00000604213 RRAGDQ9NQL2 400 aaPredicted RBP19.5■□□□□ 0.71
LYSMD4-211ENST00000604213 PDZRN3Q9UPQ7 1066 aa19.5■□□□□ 0.71
LYSMD4-211ENST00000604213 SLC24A1O60721 1099 aa19.49■□□□□ 0.71
LYSMD4-211ENST00000604213 RLBP1P12271 317 aa19.49■□□□□ 0.71
LYSMD4-211ENST00000604213 PLCH2O75038 1416 aa19.49■□□□□ 0.71
LYSMD4-211ENST00000604213 TRAPPC8Q9Y2L5 1435 aa19.48■□□□□ 0.71
LYSMD4-211ENST00000604213 TNNQ9UQP3 1299 aa19.48■□□□□ 0.71
LYSMD4-211ENST00000604213 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
LYSMD4-211ENST00000604213 ABCC1P33527 1531 aa19.46■□□□□ 0.71
LYSMD4-211ENST00000604213 CFAP70Q5T0N1 1121 aa19.46■□□□□ 0.71
LYSMD4-211ENST00000604213 EFCAB2Q5VUJ9 269 aa19.46■□□□□ 0.71
LYSMD4-211ENST00000604213 SHPRHQ149N8 1683 aa19.45■□□□□ 0.7
LYSMD4-211ENST00000604213 RUNDC1Q96C34 613 aa19.45■□□□□ 0.7
LYSMD4-211ENST00000604213 IQSEC2Q5JU85 1478 aa19.45■□□□□ 0.7
LYSMD4-211ENST00000604213 RRP7AQ9Y3A4 280 aaKnown RBP19.44■□□□□ 0.7
LYSMD4-211ENST00000604213 NEUROD2Q15784 382 aa19.44■□□□□ 0.7
LYSMD4-211ENST00000604213 WDR63Q8IWG1 891 aa19.44■□□□□ 0.7
LYSMD4-211ENST00000604213 FSD2A1L4K1 749 aa19.43■□□□□ 0.7
LYSMD4-211ENST00000604213 TCP11L2Q8N4U5 519 aa19.43■□□□□ 0.7
LYSMD4-211ENST00000604213 RWDD1Q9H446 243 aaPredicted RBP19.43■□□□□ 0.7
LYSMD4-211ENST00000604213 XRCC6P12956 609 aaKnown RBP eCLIP19.42■□□□□ 0.7
LYSMD4-211ENST00000604213 NEURL4Q96JN8 1562 aa19.42■□□□□ 0.7
LYSMD4-211ENST00000604213 TET3O43151 1660 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms