RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 SENP3Q9H4L4 574 aaPredicted RBP24.79■■□□□ 1.56
TUBE1-206ENST00000603722 PPP1R15AO75807 674 aaPredicted RBP24.78■■□□□ 1.56
TUBE1-206ENST00000603722 PLEKHG1Q9ULL1 1385 aa24.76■■□□□ 1.55
TUBE1-206ENST00000603722 ALKQ9UM73 1620 aa24.75■■□□□ 1.55
TUBE1-206ENST00000603722 HFM1A2PYH4 1435 aa24.75■■□□□ 1.55
TUBE1-206ENST00000603722 HDGFP51858 240 aaKnown RBP24.74■■□□□ 1.55
TUBE1-206ENST00000603722 DISP3Q9P2K9 1392 aa24.73■■□□□ 1.55
TUBE1-206ENST00000603722 KCNA6P17658 529 aa24.73■■□□□ 1.55
TUBE1-206ENST00000603722 HSPA1LP34931 641 aa24.72■■□□□ 1.55
TUBE1-206ENST00000603722 NUTM2DQ5VT03 806 aaPredicted RBP24.72■■□□□ 1.55
TUBE1-206ENST00000603722 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.71■■□□□ 1.55
TUBE1-206ENST00000603722 TMEM94Q12767 1356 aa24.69■■□□□ 1.54
TUBE1-206ENST00000603722 TRIM52Q96A61 297 aa24.68■■□□□ 1.54
TUBE1-206ENST00000603722 MYO5BQ9ULV0 1848 aa24.68■■□□□ 1.54
TUBE1-206ENST00000603722 NWD1Q149M9 1564 aa24.67■■□□□ 1.54
TUBE1-206ENST00000603722 NKTRP30414 1462 aaKnown RBP24.66■■□□□ 1.54
TUBE1-206ENST00000603722 RBM33Q96EV2 1170 aaKnown RBP24.66■■□□□ 1.54
TUBE1-206ENST00000603722 SPHKAPQ2M3C7 1700 aa24.65■■□□□ 1.54
TUBE1-206ENST00000603722 PROSER2Q86WR7 435 aaPredicted RBP24.65■■□□□ 1.54
TUBE1-206ENST00000603722 ADAMTS13Q76LX8 1427 aa24.63■■□□□ 1.53
TUBE1-206ENST00000603722 TRPM2O94759 1503 aa24.63■■□□□ 1.53
TUBE1-206ENST00000603722 TBX22Q9Y458 520 aa24.62■■□□□ 1.53
TUBE1-206ENST00000603722 ZNF326Q5BKZ1 582 aaKnown RBP24.61■■□□□ 1.53
TUBE1-206ENST00000603722 SLC4A1APQ9BWU0 796 aaKnown RBP24.6■■□□□ 1.53
TUBE1-206ENST00000603722 CLTCL1P53675 1640 aa24.59■■□□□ 1.53
TUBE1-206ENST00000603722 DIP2AQ14689 1571 aa24.59■■□□□ 1.53
TUBE1-206ENST00000603722 XIRP1Q702N8 1843 aaKnown RBP24.58■■□□□ 1.53
TUBE1-206ENST00000603722 MSH6P52701 1360 aa24.54■■□□□ 1.52
TUBE1-206ENST00000603722 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
TUBE1-206ENST00000603722 ILDR2Q71H61 639 aa24.53■■□□□ 1.52
TUBE1-206ENST00000603722 FAM135BQ49AJ0 1406 aa24.51■■□□□ 1.51
TUBE1-206ENST00000603722 NEXMIFQ5QGS0 1516 aa24.51■■□□□ 1.51
TUBE1-206ENST00000603722 SETBP1Q9Y6X0 1596 aa24.5■■□□□ 1.51
TUBE1-206ENST00000603722 FOXD1Q16676 465 aa24.5■■□□□ 1.51
TUBE1-206ENST00000603722 PTPRUQ92729 1446 aa24.5■■□□□ 1.51
TUBE1-206ENST00000603722 CHD2O14647 1828 aaKnown RBP24.49■■□□□ 1.51
TUBE1-206ENST00000603722 MED1Q15648 1581 aaPredicted RBP24.49■■□□□ 1.51
TUBE1-206ENST00000603722 AMOTL2Q9Y2J4 779 aa24.48■■□□□ 1.51
TUBE1-206ENST00000603722 NRXN3Q9Y4C0 1643 aa24.48■■□□□ 1.51
TUBE1-206ENST00000603722 C14orf37Q86TY3 774 aa24.47■■□□□ 1.51
TUBE1-206ENST00000603722 NCOA3Q9Y6Q9 1424 aa24.46■■□□□ 1.51
TUBE1-206ENST00000603722 METP08581 1390 aa24.44■■□□□ 1.5
TUBE1-206ENST00000603722 MPHOSPH9Q99550 1183 aa24.43■■□□□ 1.5
TUBE1-206ENST00000603722 SLAIN2Q9P270 581 aa24.42■■□□□ 1.5
TUBE1-206ENST00000603722 ROBO1Q9Y6N7 1651 aa24.42■■□□□ 1.5
TUBE1-206ENST00000603722 CCDC144AA2RUR9 1427 aa24.4■■□□□ 1.5
TUBE1-206ENST00000603722 SETD5Q9C0A6 1442 aa24.4■■□□□ 1.5
TUBE1-206ENST00000603722 KIF1BO60333 1816 aa24.4■■□□□ 1.5
TUBE1-206ENST00000603722 XRN1Q8IZH2 1706 aaKnown RBP24.38■■□□□ 1.49
TUBE1-206ENST00000603722 VGFO15240 615 aaPredicted RBP24.38■■□□□ 1.49
TUBE1-206ENST00000603722 C19orf44Q9H6X5 657 aa24.38■■□□□ 1.49
TUBE1-206ENST00000603722 RPGRIP1LQ68CZ1 1315 aa24.37■■□□□ 1.49
TUBE1-206ENST00000603722 CADPS2Q86UW7 1296 aa24.37■■□□□ 1.49
TUBE1-206ENST00000603722 ATF3P18847 181 aa24.36■■□□□ 1.49
TUBE1-206ENST00000603722 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
TUBE1-206ENST00000603722 RAB3GAP2Q9H2M9 1393 aa24.33■■□□□ 1.49
TUBE1-206ENST00000603722 ACIN1Q9UKV3 1341 aaKnown RBP24.33■■□□□ 1.48
TUBE1-206ENST00000603722 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.32■■□□□ 1.48
TUBE1-206ENST00000603722 SOCS7O14512 581 aa24.31■■□□□ 1.48
TUBE1-206ENST00000603722 RGL3Q3MIN7 710 aa24.31■■□□□ 1.48
TUBE1-206ENST00000603722 SPATA31E1Q6ZUB1 1445 aa24.31■■□□□ 1.48
TUBE1-206ENST00000603722 DCCP43146 1447 aa24.3■■□□□ 1.48
TUBE1-206ENST00000603722 PTCH1Q13635 1447 aa24.27■■□□□ 1.48
TUBE1-206ENST00000603722 ADGRF5Q8IZF2 1346 aa24.27■■□□□ 1.48
TUBE1-206ENST00000603722 ADGRL3Q9HAR2 1447 aa24.27■■□□□ 1.48
TUBE1-206ENST00000603722 ROBO2Q9HCK4 1378 aa24.26■■□□□ 1.47
TUBE1-206ENST00000603722 PPLO60437 1756 aa24.26■■□□□ 1.47
TUBE1-206ENST00000603722 SETD1AO15047 1707 aaKnown RBP24.25■■□□□ 1.47
TUBE1-206ENST00000603722 PHLPP1O60346 1717 aa24.24■■□□□ 1.47
TUBE1-206ENST00000603722 BRINP3Q76B58 766 aa24.24■■□□□ 1.47
TUBE1-206ENST00000603722 ANKRD30BQ9BXX2 1392 aa24.24■■□□□ 1.47
TUBE1-206ENST00000603722 MST1RQ04912 1400 aa24.24■■□□□ 1.47
TUBE1-206ENST00000603722 JCADQ9P266 1359 aa24.23■■□□□ 1.47
TUBE1-206ENST00000603722 PRAG1Q86YV5 1406 aa24.22■■□□□ 1.47
TUBE1-206ENST00000603722 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
TUBE1-206ENST00000603722 AHDC1Q5TGY3 1603 aaPredicted RBP24.21■■□□□ 1.47
TUBE1-206ENST00000603722 ASXL1Q8IXJ9 1541 aa24.2■■□□□ 1.46
TUBE1-206ENST00000603722 NALCNQ8IZF0 1738 aa24.19■■□□□ 1.46
TUBE1-206ENST00000603722 PIK3C2GO75747 1445 aa24.18■■□□□ 1.46
TUBE1-206ENST00000603722 RGS17Q9UGC6 210 aaPredicted RBP24.16■■□□□ 1.46
TUBE1-206ENST00000603722 IFT172Q9UG01 1749 aa24.15■■□□□ 1.46
TUBE1-206ENST00000603722 STK26Q9P289 416 aa24.14■■□□□ 1.45
TUBE1-206ENST00000603722 C1orf167Q5SNV9 1468 aa24.13■■□□□ 1.45
TUBE1-206ENST00000603722 TMEM132EQ6IEE7 984 aa24.12■■□□□ 1.45
TUBE1-206ENST00000603722 LRPPRCP42704 1394 aaKnown RBP24.12■■□□□ 1.45
TUBE1-206ENST00000603722 SPATA31A6Q5VVP1 1343 aa24.1■■□□□ 1.45
TUBE1-206ENST00000603722 HRCP23327 699 aa24.1■■□□□ 1.45
TUBE1-206ENST00000603722 MYOM2P54296 1465 aa24.1■■□□□ 1.45
TUBE1-206ENST00000603722 TECPR2O15040 1411 aa24.1■■□□□ 1.45
TUBE1-206ENST00000603722 DDX17Q92841 729 aaKnown RBP24.09■■□□□ 1.45
TUBE1-206ENST00000603722 LRP6O75581 1613 aa24.09■■□□□ 1.45
TUBE1-206ENST00000603722 NRXN1Q9ULB1 1477 aa24.08■■□□□ 1.45
TUBE1-206ENST00000603722 WAPLQ7Z5K2 1190 aa24.07■■□□□ 1.44
TUBE1-206ENST00000603722 ABCC11Q96J66 1382 aa24.06■■□□□ 1.44
TUBE1-206ENST00000603722 C14orf93Q9H972 538 aaKnown RBP24.06■■□□□ 1.44
TUBE1-206ENST00000603722 YTHDC2Q9H6S0 1430 aaKnown RBP24.06■■□□□ 1.44
TUBE1-206ENST00000603722 NHSL1Q5SYE7 1610 aa24.06■■□□□ 1.44
TUBE1-206ENST00000603722 PLEKHH1Q9ULM0 1364 aa24.05■■□□□ 1.44
TUBE1-206ENST00000603722 CFAP70Q5T0N1 1121 aa24.05■■□□□ 1.44
TUBE1-206ENST00000603722 MEX3CQ5U5Q3 659 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms