RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 PLEKHG1Q9ULL1 1385 aa35.46■■■■□ 3.27
SSX2IP-209ENST00000603677 CHGAP10645 457 aaKnown RBP35.44■■■■□ 3.26
SSX2IP-209ENST00000603677 SETD5Q9C0A6 1442 aa35.43■■■■□ 3.26
SSX2IP-209ENST00000603677 PPP1R15AO75807 674 aaPredicted RBP35.41■■■■□ 3.26
SSX2IP-209ENST00000603677 STRCP1A6NGW2 1772 aa35.36■■■■□ 3.25
SSX2IP-209ENST00000603677 KCNA6P17658 529 aa35.35■■■■□ 3.25
SSX2IP-209ENST00000603677 LRRC7Q96NW7 1537 aa35.34■■■■□ 3.25
SSX2IP-209ENST00000603677 TBX22Q9Y458 520 aa35.34■■■■□ 3.25
SSX2IP-209ENST00000603677 KIF1BO60333 1816 aa35.34■■■■□ 3.25
SSX2IP-209ENST00000603677 CLTCL1P53675 1640 aa35.33■■■■□ 3.25
SSX2IP-209ENST00000603677 TOM1O60784 492 aa35.33■■■■□ 3.25
SSX2IP-209ENST00000603677 UBAP1LF5GYI3 381 aa35.32■■■■□ 3.24
SSX2IP-209ENST00000603677 HRCP23327 699 aa35.32■■■■□ 3.24
SSX2IP-209ENST00000603677 BCANQ96GW7 911 aa35.32■■■■□ 3.24
SSX2IP-209ENST00000603677 MPHOSPH9Q99550 1183 aa35.32■■■■□ 3.24
SSX2IP-209ENST00000603677 DIP2AQ14689 1571 aa35.32■■■■□ 3.24
SSX2IP-209ENST00000603677 SLC26A8Q96RN1 970 aa35.3■■■■□ 3.24
SSX2IP-209ENST00000603677 PIK3R4Q99570 1358 aa35.29■■■■□ 3.24
SSX2IP-209ENST00000603677 NKTRP30414 1462 aaKnown RBP35.26■■■■□ 3.23
SSX2IP-209ENST00000603677 NWD1Q149M9 1564 aa35.25■■■■□ 3.23
SSX2IP-209ENST00000603677 ZNF326Q5BKZ1 582 aaKnown RBP35.25■■■■□ 3.23
SSX2IP-209ENST00000603677 RPGRIP1LQ68CZ1 1315 aa35.25■■■■□ 3.23
SSX2IP-209ENST00000603677 RAB3GAP2Q9H2M9 1393 aa35.23■■■■□ 3.23
SSX2IP-209ENST00000603677 CHD2O14647 1828 aaKnown RBP35.22■■■■□ 3.23
SSX2IP-209ENST00000603677 ADAMTS13Q76LX8 1427 aa35.22■■■■□ 3.23
SSX2IP-209ENST00000603677 CCDC144AA2RUR9 1427 aa35.19■■■■□ 3.22
SSX2IP-209ENST00000603677 SETBP1Q9Y6X0 1596 aa35.19■■■■□ 3.22
SSX2IP-209ENST00000603677 NEXMIFQ5QGS0 1516 aa35.17■■■■□ 3.22
SSX2IP-209ENST00000603677 VGFO15240 615 aaPredicted RBP35.17■■■■□ 3.22
SSX2IP-209ENST00000603677 NCOA3Q9Y6Q9 1424 aa35.15■■■■□ 3.22
SSX2IP-209ENST00000603677 NUTM2DQ5VT03 806 aaPredicted RBP35.14■■■■□ 3.22
SSX2IP-209ENST00000603677 PROSER2Q86WR7 435 aaPredicted RBP35.14■■■■□ 3.22
SSX2IP-209ENST00000603677 XIRP1Q702N8 1843 aaKnown RBP35.12■■■■□ 3.21
SSX2IP-209ENST00000603677 TMEM94Q12767 1356 aa35.12■■■■□ 3.21
SSX2IP-209ENST00000603677 FOXD1Q16676 465 aa35.09■■■■□ 3.21
SSX2IP-209ENST00000603677 NRXN3Q9Y4C0 1643 aa35.07■■■■□ 3.21
SSX2IP-209ENST00000603677 ALKQ9UM73 1620 aa35.06■■■■□ 3.2
SSX2IP-209ENST00000603677 SPATA31E1Q6ZUB1 1445 aa35.03■■■■□ 3.2
SSX2IP-209ENST00000603677 PPLO60437 1756 aa35.02■■■■□ 3.2
SSX2IP-209ENST00000603677 ANKRD30BQ9BXX2 1392 aa35.01■■■■□ 3.2
SSX2IP-209ENST00000603677 MSH6P52701 1360 aa35■■■■□ 3.19
SSX2IP-209ENST00000603677 PIP4K2BP78356 416 aa35■■■■□ 3.19
SSX2IP-209ENST00000603677 AMOTL2Q9Y2J4 779 aa35■■■■□ 3.19
SSX2IP-209ENST00000603677 SCAF1Q9H7N4 1312 aaKnown RBP34.98■■■■□ 3.19
SSX2IP-209ENST00000603677 SENP3Q9H4L4 574 aaPredicted RBP34.97■■■■□ 3.19
SSX2IP-209ENST00000603677 FAM135BQ49AJ0 1406 aa34.94■■■■□ 3.18
SSX2IP-209ENST00000603677 PTPRUQ92729 1446 aa34.94■■■■□ 3.18
SSX2IP-209ENST00000603677 XRN1Q8IZH2 1706 aaKnown RBP34.94■■■■□ 3.18
SSX2IP-209ENST00000603677 METP08581 1390 aa34.91■■■■□ 3.18
SSX2IP-209ENST00000603677 IFT172Q9UG01 1749 aa34.9■■■■□ 3.18
SSX2IP-209ENST00000603677 C19orf44Q9H6X5 657 aa34.9■■■■□ 3.18
SSX2IP-209ENST00000603677 PRAG1Q86YV5 1406 aa34.89■■■■□ 3.18
SSX2IP-209ENST00000603677 RGL3Q3MIN7 710 aa34.88■■■■□ 3.17
SSX2IP-209ENST00000603677 HSPA1LP34931 641 aa34.87■■■■□ 3.17
SSX2IP-209ENST00000603677 CADPS2Q86UW7 1296 aa34.86■■■■□ 3.17
SSX2IP-209ENST00000603677 STAC3Q96MF2 364 aa34.86■■■■□ 3.17
SSX2IP-209ENST00000603677 SETD1AO15047 1707 aaKnown RBP34.86■■■■□ 3.17
SSX2IP-209ENST00000603677 DCCP43146 1447 aa34.85■■■■□ 3.17
SSX2IP-209ENST00000603677 C14orf37Q86TY3 774 aa34.83■■■■□ 3.17
SSX2IP-209ENST00000603677 RBM33Q96EV2 1170 aaKnown RBP34.83■■■■□ 3.17
SSX2IP-209ENST00000603677 SLAIN2Q9P270 581 aa34.82■■■■□ 3.16
SSX2IP-209ENST00000603677 PTCH1Q13635 1447 aa34.81■■■■□ 3.16
SSX2IP-209ENST00000603677 ADGRF5Q8IZF2 1346 aa34.8■■■■□ 3.16
SSX2IP-209ENST00000603677 MYOM2P54296 1465 aa34.79■■■■□ 3.16
SSX2IP-209ENST00000603677 ATF3P18847 181 aa34.79■■■■□ 3.16
SSX2IP-209ENST00000603677 PIK3C2GO75747 1445 aa34.78■■■■□ 3.16
SSX2IP-209ENST00000603677 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.78■■■■□ 3.16
SSX2IP-209ENST00000603677 NRXN1Q9ULB1 1477 aa34.75■■■■□ 3.15
SSX2IP-209ENST00000603677 ROBO1Q9Y6N7 1651 aa34.73■■■■□ 3.15
SSX2IP-209ENST00000603677 ADGRL3Q9HAR2 1447 aa34.71■■■■□ 3.15
SSX2IP-209ENST00000603677 LAMC1P11047 1609 aa34.7■■■■□ 3.15
SSX2IP-209ENST00000603677 C14orf93Q9H972 538 aaKnown RBP34.68■■■■□ 3.14
SSX2IP-209ENST00000603677 TECPR2O15040 1411 aa34.67■■■■□ 3.14
SSX2IP-209ENST00000603677 ABCC11Q96J66 1382 aa34.66■■■■□ 3.14
SSX2IP-209ENST00000603677 LRPPRCP42704 1394 aaKnown RBP34.65■■■■□ 3.14
SSX2IP-209ENST00000603677 ROBO2Q9HCK4 1378 aa34.64■■■■□ 3.14
SSX2IP-209ENST00000603677 SIRT1Q96EB6 747 aa34.64■■■■□ 3.14
SSX2IP-209ENST00000603677 KNDC1Q76NI1 1749 aa34.61■■■■□ 3.13
SSX2IP-209ENST00000603677 DISP3Q9P2K9 1392 aa34.59■■■■□ 3.13
SSX2IP-209ENST00000603677 NALCNQ8IZF0 1738 aa34.58■■■■□ 3.13
SSX2IP-209ENST00000603677 DHX57Q6P158 1386 aaKnown RBP34.58■■■■□ 3.13
SSX2IP-209ENST00000603677 TRIM26Q12899 539 aaPredicted RBP34.57■■■■□ 3.12
SSX2IP-209ENST00000603677 MST1RQ04912 1400 aa34.56■■■■□ 3.12
SSX2IP-209ENST00000603677 YTHDC2Q9H6S0 1430 aaKnown RBP34.56■■■■□ 3.12
SSX2IP-209ENST00000603677 DCAF11Q8TEB1 546 aa34.56■■■■□ 3.12
SSX2IP-209ENST00000603677 ASXL1Q8IXJ9 1541 aa34.54■■■■□ 3.12
SSX2IP-209ENST00000603677 AHDC1Q5TGY3 1603 aaPredicted RBP34.53■■■■□ 3.12
SSX2IP-209ENST00000603677 CFAP70Q5T0N1 1121 aa34.52■■■■□ 3.12
SSX2IP-209ENST00000603677 PHLPP1O60346 1717 aa34.52■■■■□ 3.12
SSX2IP-209ENST00000603677 TMEM132EQ6IEE7 984 aa34.51■■■■□ 3.12
SSX2IP-209ENST00000603677 BRINP3Q76B58 766 aa34.51■■■■□ 3.12
SSX2IP-209ENST00000603677 MED1Q15648 1581 aaPredicted RBP34.49■■■■□ 3.11
SSX2IP-209ENST00000603677 STK26Q9P289 416 aa34.48■■■■□ 3.11
SSX2IP-209ENST00000603677 CDC42BPGQ6DT37 1551 aa34.48■■■■□ 3.11
SSX2IP-209ENST00000603677 KDM2AQ9Y2K7 1162 aa34.46■■■■□ 3.11
SSX2IP-209ENST00000603677 JCADQ9P266 1359 aa34.46■■■■□ 3.11
SSX2IP-209ENST00000603677 DLC1Q96QB1 1528 aa34.45■■■■□ 3.1
SSX2IP-209ENST00000603677 COL16A1Q07092 1604 aaPredicted RBP34.44■■■■□ 3.1
SSX2IP-209ENST00000603677 C1orf167Q5SNV9 1468 aa34.44■■■■□ 3.1
SSX2IP-209ENST00000603677 ADGRB1O14514 1584 aa34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms