RNA–Protein interactions for RNA: ENST00000602632.1

UBE2E3-208, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2 BASIC

Gene UBE2E3, Length 446 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-208ENST00000602632 TSKSQ9UJT2 592 aa11.14□□□□□ -0.63
UBE2E3-208ENST00000602632 PKD2Q13563 968 aa11.13□□□□□ -0.63
UBE2E3-208ENST00000602632 MFSD10Q14728 455 aa11.13□□□□□ -0.63
UBE2E3-208ENST00000602632 AAASQ9NRG9 546 aa11.13□□□□□ -0.63
UBE2E3-208ENST00000602632 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
UBE2E3-208ENST00000602632 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
UBE2E3-208ENST00000602632 PRDM2Q13029 1718 aa11.11□□□□□ -0.63
UBE2E3-208ENST00000602632 FAM181BA6NEQ2 426 aa11.1□□□□□ -0.63
UBE2E3-208ENST00000602632 APLP1P51693 650 aa11.1□□□□□ -0.63
UBE2E3-208ENST00000602632 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
UBE2E3-208ENST00000602632 CRIPAKQ8N1N5 446 aa11.09□□□□□ -0.63
UBE2E3-208ENST00000602632 NFX1Q12986 1120 aaKnown RBP11.08□□□□□ -0.64
UBE2E3-208ENST00000602632 URB2Q14146 1524 aaKnown RBP11.08□□□□□ -0.64
UBE2E3-208ENST00000602632 NBPF26B4DH59 902 aa11.07□□□□□ -0.64
UBE2E3-208ENST00000602632 RSF1Q96T23 1441 aaPredicted RBP11.07□□□□□ -0.64
UBE2E3-208ENST00000602632 RNF223E7ERA6 249 aa11.06□□□□□ -0.64
UBE2E3-208ENST00000602632 ST8SIA5O15466 376 aa11.06□□□□□ -0.64
UBE2E3-208ENST00000602632 ZPR1O75312 459 aa11.06□□□□□ -0.64
UBE2E3-208ENST00000602632 ZNF697Q5TEC3 545 aa11.06□□□□□ -0.64
UBE2E3-208ENST00000602632 RBM33Q96EV2 1170 aaKnown RBP11.06□□□□□ -0.64
UBE2E3-208ENST00000602632 GDF9O60383 454 aa11.05□□□□□ -0.64
UBE2E3-208ENST00000602632 RNF40O75150 1001 aa11.05□□□□□ -0.64
UBE2E3-208ENST00000602632 COPS2P61201 443 aa11.04□□□□□ -0.64
UBE2E3-208ENST00000602632 ANKLE1Q8NAG6 615 aa11.04□□□□□ -0.64
UBE2E3-208ENST00000602632 CERKQ8TCT0 537 aa11.03□□□□□ -0.64
UBE2E3-208ENST00000602632 PRR14Q9BWN1 585 aa11.03□□□□□ -0.64
UBE2E3-208ENST00000602632 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
UBE2E3-208ENST00000602632 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
UBE2E3-208ENST00000602632 EMID1Q96A84 441 aaPredicted RBP11.02□□□□□ -0.65
UBE2E3-208ENST00000602632 CDCA7LQ96GN5 454 aa11.02□□□□□ -0.65
UBE2E3-208ENST00000602632 RIMBP3CA6NJZ7 1639 aa11.02□□□□□ -0.65
UBE2E3-208ENST00000602632 RIMBP3BA6NNM3 1639 aa11.02□□□□□ -0.65
UBE2E3-208ENST00000602632 RIMBP3Q9UFD9 1639 aa11.02□□□□□ -0.65
UBE2E3-208ENST00000602632 C11orf95C9JLR9 678 aaPredicted RBP11.01□□□□□ -0.65
UBE2E3-208ENST00000602632 SMAPO00193 183 aa11.01□□□□□ -0.65
UBE2E3-208ENST00000602632 IFT140Q96RY7 1462 aa11□□□□□ -0.65
UBE2E3-208ENST00000602632 PRSS12P56730 875 aa11□□□□□ -0.65
UBE2E3-208ENST00000602632 TATDN2Q93075 761 aa11□□□□□ -0.65
UBE2E3-208ENST00000602632 TNFRSF10AO00220 468 aa10.99□□□□□ -0.65
UBE2E3-208ENST00000602632 SLC4A3P48751 1232 aa10.99□□□□□ -0.65
UBE2E3-208ENST00000602632 MAP3K7O43318 606 aa10.98□□□□□ -0.65
UBE2E3-208ENST00000602632 SLF2Q8IX21 1173 aa10.98□□□□□ -0.65
UBE2E3-208ENST00000602632 CTC1Q2NKJ3 1217 aa10.97□□□□□ -0.65
UBE2E3-208ENST00000602632 PNMA3Q9UL41 463 aa10.97□□□□□ -0.65
UBE2E3-208ENST00000602632 ZNF608Q9ULD9 1512 aaPredicted RBP10.97□□□□□ -0.65
UBE2E3-208ENST00000602632 ABCC8Q09428 1581 aa10.96□□□□□ -0.65
UBE2E3-208ENST00000602632 CCDC88BA6NC98 1476 aa10.96□□□□□ -0.65
UBE2E3-208ENST00000602632 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
UBE2E3-208ENST00000602632 AVPP01185 164 aa10.95□□□□□ -0.66
UBE2E3-208ENST00000602632 NKX1-1Q15270 411 aaPredicted RBP10.95□□□□□ -0.66
UBE2E3-208ENST00000602632 ARHGEF11O15085 1522 aa10.94□□□□□ -0.66
UBE2E3-208ENST00000602632 CHGAP10645 457 aaKnown RBP10.94□□□□□ -0.66
UBE2E3-208ENST00000602632 TSR1Q2NL82 804 aaKnown RBP10.94□□□□□ -0.66
UBE2E3-208ENST00000602632 NBR1Q14596 966 aa10.93□□□□□ -0.66
UBE2E3-208ENST00000602632 LIAT1Q6ZQX7 453 aa10.93□□□□□ -0.66
UBE2E3-208ENST00000602632 GMPR2Q9P2T1 348 aaKnown RBP10.93□□□□□ -0.66
UBE2E3-208ENST00000602632 EIF4G3O43432 1585 aaKnown RBP10.93□□□□□ -0.66
UBE2E3-208ENST00000602632 AXIN1O15169 862 aa10.92□□□□□ -0.66
UBE2E3-208ENST00000602632 SUZ12Q15022 739 aaKnown RBP10.92□□□□□ -0.66
UBE2E3-208ENST00000602632 DDX12PQ92771 950 aa10.92□□□□□ -0.66
UBE2E3-208ENST00000602632 PCDHB3Q9Y5E6 796 aa10.92□□□□□ -0.66
UBE2E3-208ENST00000602632 CHD1O14646 1710 aa10.92□□□□□ -0.66
UBE2E3-208ENST00000602632 DNMBPQ6XZF7 1577 aa10.91□□□□□ -0.66
UBE2E3-208ENST00000602632 CYB5RLQ6IPT4 315 aa10.9□□□□□ -0.66
UBE2E3-208ENST00000602632 RBM27Q9P2N5 1060 aaKnown RBP10.9□□□□□ -0.66
UBE2E3-208ENST00000602632 TERTO14746 1132 aaKnown RBP10.89□□□□□ -0.67
UBE2E3-208ENST00000602632 SMCPP49901 116 aaPredicted RBP10.89□□□□□ -0.67
UBE2E3-208ENST00000602632 FAM198AQ9UFP1 575 aa10.89□□□□□ -0.67
UBE2E3-208ENST00000602632 CAMK2BQ13554 666 aa10.88□□□□□ -0.67
UBE2E3-208ENST00000602632 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
UBE2E3-208ENST00000602632 DPYSL4O14531 572 aa10.87□□□□□ -0.67
UBE2E3-208ENST00000602632 NUDT18Q6ZVK8 323 aa10.86□□□□□ -0.67
UBE2E3-208ENST00000602632 DACH1Q9UI36 760 aa10.86□□□□□ -0.67
UBE2E3-208ENST00000602632 AQRO60306 1485 aaKnown RBP eCLIP10.86□□□□□ -0.67
UBE2E3-208ENST00000602632 SWT1Q5T5J6 900 aaKnown RBP10.84□□□□□ -0.67
UBE2E3-208ENST00000602632 C3orf80F5H4A9 247 aa10.83□□□□□ -0.68
UBE2E3-208ENST00000602632 S1PR4O95977 384 aa10.83□□□□□ -0.68
UBE2E3-208ENST00000602632 BLOC1S3Q6QNY0 202 aa10.83□□□□□ -0.68
UBE2E3-208ENST00000602632 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
UBE2E3-208ENST00000602632 PKD2L1Q9P0L9 805 aa10.82□□□□□ -0.68
UBE2E3-208ENST00000602632 ARAP1Q96P48 1450 aa10.81□□□□□ -0.68
UBE2E3-208ENST00000602632 SENP2Q9HC62 589 aa10.81□□□□□ -0.68
UBE2E3-208ENST00000602632 PPEF1O14829 653 aaPredicted RBP10.8□□□□□ -0.68
UBE2E3-208ENST00000602632 LCE2CQ5TA81 110 aa10.8□□□□□ -0.68
UBE2E3-208ENST00000602632 SOGA1O94964 1423 aa10.79□□□□□ -0.68
UBE2E3-208ENST00000602632 TLL1O43897 1013 aa10.79□□□□□ -0.68
UBE2E3-208ENST00000602632 FOXC1Q12948 553 aa10.79□□□□□ -0.68
UBE2E3-208ENST00000602632 ZSCAN1Q8NBB4 408 aa10.79□□□□□ -0.68
UBE2E3-208ENST00000602632 TOR4AQ9NXH8 423 aa10.79□□□□□ -0.68
UBE2E3-208ENST00000602632 WDR97A6NE52 1622 aa10.79□□□□□ -0.68
UBE2E3-208ENST00000602632 RAD54L2Q9Y4B4 1467 aa10.79□□□□□ -0.68
UBE2E3-208ENST00000602632 TDRD9Q8NDG6 1382 aaKnown RBP10.77□□□□□ -0.68
UBE2E3-208ENST00000602632 ADH1BP00325 375 aa10.77□□□□□ -0.69
UBE2E3-208ENST00000602632 CYP4X1Q8N118 509 aa10.77□□□□□ -0.69
UBE2E3-208ENST00000602632 SLC16A10Q8TF71 515 aa10.77□□□□□ -0.69
UBE2E3-208ENST00000602632 CHMP7Q8WUX9 453 aaPredicted RBP10.76□□□□□ -0.69
UBE2E3-208ENST00000602632 TRIM47Q96LD4 638 aa10.76□□□□□ -0.69
UBE2E3-208ENST00000602632 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
UBE2E3-208ENST00000602632 SNAPC4Q5SXM2 1469 aa10.75□□□□□ -0.69
UBE2E3-208ENST00000602632 PDIA6Q15084 440 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms