RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 SULF1Q8IWU6 871 aa15.36■□□□□ 0.05
SGMS1-206ENST00000602565 BEGAINQ9BUH8 593 aa15.36■□□□□ 0.05
SGMS1-206ENST00000602565 HDGFP51858 240 aaKnown RBP15.35■□□□□ 0.05
SGMS1-206ENST00000602565 LSM11P83369 360 aaKnown RBP eCLIP15.35■□□□□ 0.05
SGMS1-206ENST00000602565 TK2O00142 265 aa15.34■□□□□ 0.05
SGMS1-206ENST00000602565 DDX11L8A8MPP1 907 aa15.33■□□□□ 0.04
SGMS1-206ENST00000602565 FAM98CQ17RN3 349 aaKnown RBP15.33■□□□□ 0.04
SGMS1-206ENST00000602565 SLC4A3P48751 1232 aa15.31■□□□□ 0.04
SGMS1-206ENST00000602565 ADGRD1Q6QNK2 874 aa15.31■□□□□ 0.04
SGMS1-206ENST00000602565 LAPTM4BQ86VI4 370 aa15.3■□□□□ 0.04
SGMS1-206ENST00000602565 STAC3Q96MF2 364 aa15.3■□□□□ 0.04
SGMS1-206ENST00000602565 ANKRD13DQ6ZTN6 518 aa15.29■□□□□ 0.04
SGMS1-206ENST00000602565 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
SGMS1-206ENST00000602565 SWT1Q5T5J6 900 aaKnown RBP15.28■□□□□ 0.04
SGMS1-206ENST00000602565 RSPH4AQ5TD94 716 aa15.28■□□□□ 0.04
SGMS1-206ENST00000602565 RDH13Q8NBN7 331 aa15.28■□□□□ 0.04
SGMS1-206ENST00000602565 RSPH6AQ9H0K4 717 aa15.28■□□□□ 0.04
SGMS1-206ENST00000602565 CD46P15529 392 aa15.25■□□□□ 0.03
SGMS1-206ENST00000602565 BHMG1C9JSJ3 638 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-206ENST00000602565 DIXDC1Q155Q3 683 aa15.24■□□□□ 0.03
SGMS1-206ENST00000602565 GOPCQ9HD26 462 aa15.24■□□□□ 0.03
SGMS1-206ENST00000602565 ATP1B4Q9UN42 357 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-206ENST00000602565 PCMTD1Q96MG8 357 aaPredicted RBP15.23■□□□□ 0.03
SGMS1-206ENST00000602565 RNF40O75150 1001 aa15.22■□□□□ 0.03
SGMS1-206ENST00000602565 SH3D19Q5HYK7 790 aa15.22■□□□□ 0.03
SGMS1-206ENST00000602565 SAMD7Q7Z3H4 446 aa15.22■□□□□ 0.03
SGMS1-206ENST00000602565 GOLGA8CPA6NN73 597 aa15.21■□□□□ 0.03
SGMS1-206ENST00000602565 NUTM1Q86Y26 1132 aa15.21■□□□□ 0.03
SGMS1-206ENST00000602565 SLF2Q8IX21 1173 aa15.21■□□□□ 0.03
SGMS1-206ENST00000602565 ZFRQ96KR1 1074 aaKnown RBP15.21■□□□□ 0.03
SGMS1-206ENST00000602565 ERICH6Q7L0X2 663 aa15.19■□□□□ 0.02
SGMS1-206ENST00000602565 TBC1D2Q9BYX2 928 aa15.19■□□□□ 0.02
SGMS1-206ENST00000602565 HRO43593 1189 aa15.17■□□□□ 0.02
SGMS1-206ENST00000602565 SKIV2LQ15477 1246 aaKnown RBP15.17■□□□□ 0.02
SGMS1-206ENST00000602565 MYSM1Q5VVJ2 828 aa15.16■□□□□ 0.02
SGMS1-206ENST00000602565 LRCH3Q96II8 777 aa15.16■□□□□ 0.02
SGMS1-206ENST00000602565 POLR3EQ9NVU0 708 aa15.16■□□□□ 0.02
SGMS1-206ENST00000602565 SPIRE2Q8WWL2 714 aa15.15■□□□□ 0.02
SGMS1-206ENST00000602565 ANKK1Q8NFD2 765 aa15.14■□□□□ 0.01
SGMS1-206ENST00000602565 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.14■□□□□ 0.01
SGMS1-206ENST00000602565 TIMELESSQ9UNS1 1208 aa15.14■□□□□ 0.01
SGMS1-206ENST00000602565 SLC10A3P09131 477 aa15.13■□□□□ 0.01
SGMS1-206ENST00000602565 SPNS2Q8IVW8 549 aa15.13■□□□□ 0.01
SGMS1-206ENST00000602565 NECTIN2Q92692 538 aa15.13■□□□□ 0.01
SGMS1-206ENST00000602565 KDM4AO75164 1064 aa15.12■□□□□ 0.01
SGMS1-206ENST00000602565 GCGRP47871 477 aa15.12■□□□□ 0.01
SGMS1-206ENST00000602565 CLK2P49760 499 aaKnown RBP15.12■□□□□ 0.01
SGMS1-206ENST00000602565 KRTAP3-3Q9BYR6 98 aa15.11■□□□□ 0.01
SGMS1-206ENST00000602565 KRTAP3-2Q9BYR7 98 aa15.11■□□□□ 0.01
SGMS1-206ENST00000602565 CFHP08603 1231 aa15.09■□□□□ 0.01
SGMS1-206ENST00000602565 USP46P62068 366 aa15.08■□□□□ 0
SGMS1-206ENST00000602565 MMRN1Q13201 1228 aa15.08■□□□□ 0
SGMS1-206ENST00000602565 KMT5BQ4FZB7 885 aa15.07■□□□□ 0
SGMS1-206ENST00000602565 RIC3Q7Z5B4 369 aa15.07■□□□□ 0
SGMS1-206ENST00000602565 WNT2BQ93097 391 aa15.07■□□□□ 0
SGMS1-206ENST00000602565 PROCA1Q8NCQ7 364 aaPredicted RBP15.06■□□□□ 0
SGMS1-206ENST00000602565 MOXD2PA6NHM9 499 aa15.04■□□□□ -0
SGMS1-206ENST00000602565 C14orf37Q86TY3 774 aa15.04■□□□□ -0
SGMS1-206ENST00000602565 SOWAHBA6NEL2 793 aa15.03■□□□□ -0
SGMS1-206ENST00000602565 GRIPAP1Q4V328 841 aa15.03■□□□□ -0
SGMS1-206ENST00000602565 RSBN1LQ6PCB5 846 aaPredicted RBP15.03■□□□□ -0
SGMS1-206ENST00000602565 LIMD1Q9UGP4 676 aa15.03■□□□□ -0
SGMS1-206ENST00000602565 SPTLC1O15269 473 aa15.02■□□□□ -0
SGMS1-206ENST00000602565 HOXA2O43364 376 aa15.02■□□□□ -0
SGMS1-206ENST00000602565 NDUFV2P19404 249 aa15.02■□□□□ -0
SGMS1-206ENST00000602565 PPP4CP60510 307 aa15.02■□□□□ -0
SGMS1-206ENST00000602565 HPS5Q9UPZ3 1129 aa15.02■□□□□ -0
SGMS1-206ENST00000602565 BCAMP50895 628 aa15.01□□□□□ -0.01
SGMS1-206ENST00000602565 CSPP1Q1MSJ5 1256 aa15.01□□□□□ -0.01
SGMS1-206ENST00000602565 GNL3Q9BVP2 549 aaKnown RBP eCLIP15□□□□□ -0.01
SGMS1-206ENST00000602565 PRR14Q9BWN1 585 aa15□□□□□ -0.01
SGMS1-206ENST00000602565 FUT2Q10981 343 aa14.99□□□□□ -0.01
SGMS1-206ENST00000602565 TSR3Q9UJK0 312 aaKnown RBP14.99□□□□□ -0.01
SGMS1-206ENST00000602565 GJA5P36382 358 aa14.98□□□□□ -0.01
SGMS1-206ENST00000602565 FDX1P10109 184 aa14.97□□□□□ -0.01
SGMS1-206ENST00000602565 TUSC1Q2TAM9 212 aa14.96□□□□□ -0.01
SGMS1-206ENST00000602565 ATP6V1AP38606 617 aa14.95□□□□□ -0.02
SGMS1-206ENST00000602565 KCTD12Q96CX2 325 aaKnown RBP14.95□□□□□ -0.02
SGMS1-206ENST00000602565 ARXQ96QS3 562 aa14.95□□□□□ -0.02
SGMS1-206ENST00000602565 NUTM2BA6NNL0 878 aaPredicted RBP14.93□□□□□ -0.02
SGMS1-206ENST00000602565 NUTM2EB1AL46 878 aaPredicted RBP14.93□□□□□ -0.02
SGMS1-206ENST00000602565 ACTN4O43707 911 aaKnown RBP14.93□□□□□ -0.02
SGMS1-206ENST00000602565 NUTM2DQ5VT03 806 aaPredicted RBP14.93□□□□□ -0.02
SGMS1-206ENST00000602565 NUTM2AQ8IVF1 878 aaPredicted RBP14.93□□□□□ -0.02
SGMS1-206ENST00000602565 GUCA2AQ02747 115 aa14.92□□□□□ -0.02
SGMS1-206ENST00000602565 HLA-CQ95604 372 aa14.92□□□□□ -0.02
SGMS1-206ENST00000602565 PCDHB15Q9Y5E8 787 aa14.92□□□□□ -0.02
SGMS1-206ENST00000602565 FLIIQ13045 1269 aa14.92□□□□□ -0.02
SGMS1-206ENST00000602565 THSD4Q6ZMP0 1018 aa14.92□□□□□ -0.02
SGMS1-206ENST00000602565 ZBTB3Q9H5J0 574 aa14.91□□□□□ -0.02
SGMS1-206ENST00000602565 RFC5P40937 340 aa14.9□□□□□ -0.02
SGMS1-206ENST00000602565 QPCTQ16769 361 aa14.9□□□□□ -0.02
SGMS1-206ENST00000602565 PRPF38BQ5VTL8 546 aaKnown RBP14.9□□□□□ -0.02
SGMS1-206ENST00000602565 PUS10Q3MIT2 529 aaKnown RBP14.89□□□□□ -0.03
SGMS1-206ENST00000602565 PPP2R2DQ66LE6 453 aa14.89□□□□□ -0.03
SGMS1-206ENST00000602565 WBP1LQ9NX94 342 aa14.89□□□□□ -0.03
SGMS1-206ENST00000602565 LILRB3O75022 631 aa14.88□□□□□ -0.03
SGMS1-206ENST00000602565 APLP1P51693 650 aa14.88□□□□□ -0.03
SGMS1-206ENST00000602565 PCDHGC3Q9UN70 934 aa14.88□□□□□ -0.03
SGMS1-206ENST00000602565 CABLES1Q8TDN4 633 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms