RNA–Protein interactions for RNA: ENST00000602509.5

PPFIA3-205, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-205ENST00000602509 TMEM131LA2VDJ0 1609 aa39.62■■■■□ 3.93
PPFIA3-205ENST00000602509 ZFYVE9O95405 1425 aa39.61■■■■□ 3.93
PPFIA3-205ENST00000602509 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.61■■■■□ 3.93
PPFIA3-205ENST00000602509 SENP3Q9H4L4 574 aaPredicted RBP39.59■■■■□ 3.93
PPFIA3-205ENST00000602509 HFM1A2PYH4 1435 aa39.58■■■■□ 3.93
PPFIA3-205ENST00000602509 KCNA6P17658 529 aa39.57■■■■□ 3.93
PPFIA3-205ENST00000602509 TRIM52Q96A61 297 aa39.57■■■■□ 3.93
PPFIA3-205ENST00000602509 PLEKHG1Q9ULL1 1385 aa39.57■■■■□ 3.92
PPFIA3-205ENST00000602509 NUTM2DQ5VT03 806 aaPredicted RBP39.51■■■■□ 3.92
PPFIA3-205ENST00000602509 MYO5BQ9ULV0 1848 aa39.51■■■■□ 3.92
PPFIA3-205ENST00000602509 HSPA1LP34931 641 aa39.47■■■■□ 3.91
PPFIA3-205ENST00000602509 PROSER2Q86WR7 435 aaPredicted RBP39.47■■■■□ 3.91
PPFIA3-205ENST00000602509 DISP3Q9P2K9 1392 aa39.46■■■■□ 3.91
PPFIA3-205ENST00000602509 TMEM94Q12767 1356 aa39.44■■■■□ 3.9
PPFIA3-205ENST00000602509 TBX22Q9Y458 520 aa39.43■■■■□ 3.9
PPFIA3-205ENST00000602509 ZNF326Q5BKZ1 582 aaKnown RBP39.42■■■■□ 3.9
PPFIA3-205ENST00000602509 SPHKAPQ2M3C7 1700 aa39.42■■■■□ 3.9
PPFIA3-205ENST00000602509 ALKQ9UM73 1620 aa39.41■■■■□ 3.9
PPFIA3-205ENST00000602509 SLC4A1APQ9BWU0 796 aaKnown RBP39.41■■■■□ 3.9
PPFIA3-205ENST00000602509 RBM33Q96EV2 1170 aaKnown RBP39.37■■■■□ 3.89
PPFIA3-205ENST00000602509 NKTRP30414 1462 aaKnown RBP39.37■■■■□ 3.89
PPFIA3-205ENST00000602509 TRPM2O94759 1503 aa39.34■■■■□ 3.89
PPFIA3-205ENST00000602509 NWD1Q149M9 1564 aa39.33■■■■□ 3.89
PPFIA3-205ENST00000602509 ADAMTS13Q76LX8 1427 aa39.31■■■■□ 3.88
PPFIA3-205ENST00000602509 XIRP1Q702N8 1843 aaKnown RBP39.28■■■■□ 3.88
PPFIA3-205ENST00000602509 CLTCL1P53675 1640 aa39.27■■■■□ 3.88
PPFIA3-205ENST00000602509 DIP2AQ14689 1571 aa39.27■■■■□ 3.88
PPFIA3-205ENST00000602509 PIK3R4Q99570 1358 aa39.26■■■■□ 3.88
PPFIA3-205ENST00000602509 MSH6P52701 1360 aa39.24■■■■□ 3.87
PPFIA3-205ENST00000602509 CHD2O14647 1828 aaKnown RBP39.21■■■■□ 3.87
PPFIA3-205ENST00000602509 C14orf37Q86TY3 774 aa39.19■■■■□ 3.86
PPFIA3-205ENST00000602509 FOXD1Q16676 465 aa39.18■■■■□ 3.86
PPFIA3-205ENST00000602509 AMOTL2Q9Y2J4 779 aa39.17■■■■□ 3.86
PPFIA3-205ENST00000602509 FAM135BQ49AJ0 1406 aa39.16■■■■□ 3.86
PPFIA3-205ENST00000602509 MPHOSPH9Q99550 1183 aa39.16■■■■□ 3.86
PPFIA3-205ENST00000602509 ACIN1Q9UKV3 1341 aaKnown RBP39.14■■■■□ 3.86
PPFIA3-205ENST00000602509 NCOA3Q9Y6Q9 1424 aa39.14■■■■□ 3.86
PPFIA3-205ENST00000602509 SETBP1Q9Y6X0 1596 aa39.13■■■■□ 3.85
PPFIA3-205ENST00000602509 NEXMIFQ5QGS0 1516 aa39.13■■■■□ 3.85
PPFIA3-205ENST00000602509 KIF1BO60333 1816 aa39.12■■■■□ 3.85
PPFIA3-205ENST00000602509 VGFO15240 615 aaPredicted RBP39.11■■■■□ 3.85
PPFIA3-205ENST00000602509 SETD5Q9C0A6 1442 aa39.1■■■■□ 3.85
PPFIA3-205ENST00000602509 SLAIN2Q9P270 581 aa39.1■■■■□ 3.85
PPFIA3-205ENST00000602509 PTPRUQ92729 1446 aa39.09■■■■□ 3.85
PPFIA3-205ENST00000602509 RPGRIP1LQ68CZ1 1315 aa39.09■■■■□ 3.85
PPFIA3-205ENST00000602509 ILDR2Q71H61 639 aa39.08■■■■□ 3.85
PPFIA3-205ENST00000602509 NRXN3Q9Y4C0 1643 aa39.07■■■■□ 3.84
PPFIA3-205ENST00000602509 C19orf44Q9H6X5 657 aa39.05■■■■□ 3.84
PPFIA3-205ENST00000602509 METP08581 1390 aa39.05■■■■□ 3.84
PPFIA3-205ENST00000602509 CCDC144AA2RUR9 1427 aa39.04■■■■□ 3.84
PPFIA3-205ENST00000602509 ATF3P18847 181 aa39.02■■■■□ 3.84
PPFIA3-205ENST00000602509 MED1Q15648 1581 aaPredicted RBP39.01■■■■□ 3.84
PPFIA3-205ENST00000602509 CADPS2Q86UW7 1296 aa39.01■■■■□ 3.84
PPFIA3-205ENST00000602509 ROBO1Q9Y6N7 1651 aa38.97■■■■□ 3.83
PPFIA3-205ENST00000602509 RAB3GAP2Q9H2M9 1393 aa38.95■■■■□ 3.83
PPFIA3-205ENST00000602509 RGL3Q3MIN7 710 aa38.94■■■■□ 3.82
PPFIA3-205ENST00000602509 PHF23Q9BUL5 403 aaPredicted RBP38.93■■■■□ 3.82
PPFIA3-205ENST00000602509 XRN1Q8IZH2 1706 aaKnown RBP38.92■■■■□ 3.82
PPFIA3-205ENST00000602509 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.87■■■■□ 3.81
PPFIA3-205ENST00000602509 SPATA31E1Q6ZUB1 1445 aa38.85■■■■□ 3.81
PPFIA3-205ENST00000602509 DCCP43146 1447 aa38.83■■■■□ 3.81
PPFIA3-205ENST00000602509 PPLO60437 1756 aa38.82■■■■□ 3.8
PPFIA3-205ENST00000602509 ANKRD30BQ9BXX2 1392 aa38.82■■■■□ 3.8
PPFIA3-205ENST00000602509 ADGRF5Q8IZF2 1346 aa38.81■■■■□ 3.8
PPFIA3-205ENST00000602509 SOCS7O14512 581 aa38.79■■■■□ 3.8
PPFIA3-205ENST00000602509 ADGRL3Q9HAR2 1447 aa38.76■■■■□ 3.8
PPFIA3-205ENST00000602509 PTCH1Q13635 1447 aa38.75■■■■□ 3.79
PPFIA3-205ENST00000602509 PHLPP1O60346 1717 aa38.74■■■■□ 3.79
PPFIA3-205ENST00000602509 BRINP3Q76B58 766 aa38.73■■■■□ 3.79
PPFIA3-205ENST00000602509 ROBO2Q9HCK4 1378 aa38.72■■■■□ 3.79
PPFIA3-205ENST00000602509 SETD1AO15047 1707 aaKnown RBP38.72■■■■□ 3.79
PPFIA3-205ENST00000602509 JCADQ9P266 1359 aa38.71■■■■□ 3.79
PPFIA3-205ENST00000602509 HRCP23327 699 aa38.71■■■■□ 3.79
PPFIA3-205ENST00000602509 MST1RQ04912 1400 aa38.69■■■■□ 3.78
PPFIA3-205ENST00000602509 PRAG1Q86YV5 1406 aa38.67■■■■□ 3.78
PPFIA3-205ENST00000602509 STK26Q9P289 416 aa38.64■■■■□ 3.78
PPFIA3-205ENST00000602509 AHDC1Q5TGY3 1603 aaPredicted RBP38.63■■■■□ 3.77
PPFIA3-205ENST00000602509 COL16A1Q07092 1604 aaPredicted RBP38.62■■■■□ 3.77
PPFIA3-205ENST00000602509 PIK3C2GO75747 1445 aa38.62■■■■□ 3.77
PPFIA3-205ENST00000602509 NALCNQ8IZF0 1738 aa38.6■■■■□ 3.77
PPFIA3-205ENST00000602509 IFT172Q9UG01 1749 aa38.6■■■■□ 3.77
PPFIA3-205ENST00000602509 ASXL1Q8IXJ9 1541 aa38.6■■■■□ 3.77
PPFIA3-205ENST00000602509 TMEM132EQ6IEE7 984 aa38.59■■■■□ 3.77
PPFIA3-205ENST00000602509 LRPPRCP42704 1394 aaKnown RBP38.57■■■■□ 3.77
PPFIA3-205ENST00000602509 RGS17Q9UGC6 210 aaPredicted RBP38.55■■■■□ 3.76
PPFIA3-205ENST00000602509 SPATA31A6Q5VVP1 1343 aa38.54■■■■□ 3.76
PPFIA3-205ENST00000602509 C1orf167Q5SNV9 1468 aa38.54■■■■□ 3.76
PPFIA3-205ENST00000602509 C14orf93Q9H972 538 aaKnown RBP38.53■■■■□ 3.76
PPFIA3-205ENST00000602509 ABCC11Q96J66 1382 aa38.52■■■■□ 3.76
PPFIA3-205ENST00000602509 MYOM2P54296 1465 aa38.51■■■■□ 3.76
PPFIA3-205ENST00000602509 TECPR2O15040 1411 aa38.5■■■■□ 3.75
PPFIA3-205ENST00000602509 WAPLQ7Z5K2 1190 aa38.5■■■■□ 3.75
PPFIA3-205ENST00000602509 NRXN1Q9ULB1 1477 aa38.48■■■■□ 3.75
PPFIA3-205ENST00000602509 CFAP70Q5T0N1 1121 aa38.48■■■■□ 3.75
PPFIA3-205ENST00000602509 YTHDC2Q9H6S0 1430 aaKnown RBP38.47■■■■□ 3.75
PPFIA3-205ENST00000602509 MEX3CQ5U5Q3 659 aaKnown RBP38.47■■■■□ 3.75
PPFIA3-205ENST00000602509 DDX17Q92841 729 aaKnown RBP38.47■■■■□ 3.75
PPFIA3-205ENST00000602509 LRRC59Q96AG4 307 aaKnown RBP38.47■■■■□ 3.75
PPFIA3-205ENST00000602509 ORAI2Q96SN7 254 aa38.45■■■■□ 3.75
PPFIA3-205ENST00000602509 DHX57Q6P158 1386 aaKnown RBP38.44■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms