RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	POTEA	Q6S8J7	498 aa		28.78	■■■□□ 2.2
IRF3-231	ENST00000602190	TMEM131L	A2VDJ0	1609 aa		28.78	■■■□□ 2.2
IRF3-231	ENST00000602190	GCC2	Q8IWJ2	1684 aa		28.77	■■■□□ 2.2
IRF3-231	ENST00000602190	PLEKHG1	Q9ULL1	1385 aa		28.76	■■■□□ 2.2
IRF3-231	ENST00000602190	PROSER2	Q86WR7	435 aa	Predicted RBP	28.76	■■■□□ 2.19
IRF3-231	ENST00000602190	PHLPP1	O60346	1717 aa		28.74	■■■□□ 2.19
IRF3-231	ENST00000602190	COL16A1	Q07092	1604 aa	Predicted RBP	28.73	■■■□□ 2.19
IRF3-231	ENST00000602190	NCOA3	Q9Y6Q9	1424 aa		28.73	■■■□□ 2.19
IRF3-231	ENST00000602190	CHIC2	Q9UKJ5	165 aa		28.72	■■■□□ 2.19
IRF3-231	ENST00000602190	MSH6	P52701	1360 aa		28.72	■■■□□ 2.19
IRF3-231	ENST00000602190	UNC13B	O14795	1591 aa		28.71	■■■□□ 2.19
IRF3-231	ENST00000602190	ANKRD50	Q9ULJ7	1429 aa		28.71	■■■□□ 2.19
IRF3-231	ENST00000602190	RBM33	Q96EV2	1170 aa	Known RBP	28.69	■■■□□ 2.18
IRF3-231	ENST00000602190	RIMS2	Q9UQ26	1411 aa		28.68	■■■□□ 2.18
IRF3-231	ENST00000602190	SLAIN2	Q9P270	581 aa		28.67	■■■□□ 2.18
IRF3-231	ENST00000602190	DIP2A	Q14689	1571 aa		28.67	■■■□□ 2.18
IRF3-231	ENST00000602190	JCAD	Q9P266	1359 aa		28.66	■■■□□ 2.18
IRF3-231	ENST00000602190	ADAMTS13	Q76LX8	1427 aa		28.65	■■■□□ 2.18
IRF3-231	ENST00000602190	TBX22	Q9Y458	520 aa		28.64	■■■□□ 2.18
IRF3-231	ENST00000602190		E9PCH4	1651 aa		28.64	■■■□□ 2.17
IRF3-231	ENST00000602190	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.63	■■■□□ 2.17
IRF3-231	ENST00000602190	APLP2	Q06481	763 aa		28.63	■■■□□ 2.17
IRF3-231	ENST00000602190	SETD1A	O15047	1707 aa	Known RBP	28.63	■■■□□ 2.17
IRF3-231	ENST00000602190	PIK3R4	Q99570	1358 aa		28.61	■■■□□ 2.17
IRF3-231	ENST00000602190	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.6	■■■□□ 2.17
IRF3-231	ENST00000602190	SHPRH	Q149N8	1683 aa		28.6	■■■□□ 2.17
IRF3-231	ENST00000602190	LRP6	O75581	1613 aa		28.59	■■■□□ 2.17
IRF3-231	ENST00000602190	IQGAP3	Q86VI3	1631 aa		28.58	■■■□□ 2.17
IRF3-231	ENST00000602190	HDGF	P51858	240 aa	Known RBP	28.56	■■■□□ 2.16
IRF3-231	ENST00000602190	SPATA31A6	Q5VVP1	1343 aa		28.53	■■■□□ 2.16
IRF3-231	ENST00000602190	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.52	■■■□□ 2.16
IRF3-231	ENST00000602190	ROCK1	Q13464	1354 aa		28.5	■■■□□ 2.15
IRF3-231	ENST00000602190	TRPM2	O94759	1503 aa		28.5	■■■□□ 2.15
IRF3-231	ENST00000602190	NRXN3	Q9Y4C0	1643 aa		28.5	■■■□□ 2.15
IRF3-231	ENST00000602190	XRN1	Q8IZH2	1706 aa	Known RBP	28.49	■■■□□ 2.15
IRF3-231	ENST00000602190	PPP1R15A	O75807	674 aa	Predicted RBP	28.48	■■■□□ 2.15
IRF3-231	ENST00000602190	BCAN	Q96GW7	911 aa		28.48	■■■□□ 2.15
IRF3-231	ENST00000602190	DCC	P43146	1447 aa		28.48	■■■□□ 2.15
IRF3-231	ENST00000602190	PTPRU	Q92729	1446 aa		28.48	■■■□□ 2.15
IRF3-231	ENST00000602190	C19orf44	Q9H6X5	657 aa		28.47	■■■□□ 2.15
IRF3-231	ENST00000602190	CADPS2	Q86UW7	1296 aa		28.46	■■■□□ 2.15
IRF3-231	ENST00000602190	SETBP1	Q9Y6X0	1596 aa		28.45	■■■□□ 2.14
IRF3-231	ENST00000602190	FAM50A	Q14320	339 aa	Known RBP	28.44	■■■□□ 2.14
IRF3-231	ENST00000602190	NHSL1	Q5SYE7	1610 aa		28.42	■■■□□ 2.14
IRF3-231	ENST00000602190	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.4	■■■□□ 2.14
IRF3-231	ENST00000602190	ZNF772	Q68DY9	489 aa	Predicted RBP	28.38	■■■□□ 2.13
IRF3-231	ENST00000602190	BRINP3	Q76B58	766 aa		28.38	■■■□□ 2.13
IRF3-231	ENST00000602190	ASXL1	Q8IXJ9	1541 aa		28.38	■■■□□ 2.13
IRF3-231	ENST00000602190	SETD5	Q9C0A6	1442 aa		28.37	■■■□□ 2.13
IRF3-231	ENST00000602190	SPHKAP	Q2M3C7	1700 aa		28.37	■■■□□ 2.13
IRF3-231	ENST00000602190	MST1R	Q04912	1400 aa		28.35	■■■□□ 2.13
IRF3-231	ENST00000602190	ATF3	P18847	181 aa		28.35	■■■□□ 2.13
IRF3-231	ENST00000602190	AMOTL2	Q9Y2J4	779 aa		28.35	■■■□□ 2.13
IRF3-231	ENST00000602190	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.34	■■■□□ 2.13
IRF3-231	ENST00000602190	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.34	■■■□□ 2.13
IRF3-231	ENST00000602190	CHGA	P10645	457 aa	Known RBP	28.32	■■■□□ 2.12
IRF3-231	ENST00000602190	C14orf37	Q86TY3	774 aa		28.31	■■■□□ 2.12
IRF3-231	ENST00000602190	NUP155	O75694	1391 aa		28.3	■■■□□ 2.12
IRF3-231	ENST00000602190	LAMC1	P11047	1609 aa		28.29	■■■□□ 2.12
IRF3-231	ENST00000602190	NALCN	Q8IZF0	1738 aa		28.27	■■■□□ 2.12
IRF3-231	ENST00000602190	NEXMIF	Q5QGS0	1516 aa		28.26	■■■□□ 2.11
IRF3-231	ENST00000602190	ADGRL3	Q9HAR2	1447 aa		28.26	■■■□□ 2.11
IRF3-231	ENST00000602190	MET	P08581	1390 aa		28.25	■■■□□ 2.11
IRF3-231	ENST00000602190	MEX3C	Q5U5Q3	659 aa	Known RBP	28.25	■■■□□ 2.11
IRF3-231	ENST00000602190	PRAG1	Q86YV5	1406 aa		28.22	■■■□□ 2.11
IRF3-231	ENST00000602190	CLTCL1	P53675	1640 aa		28.21	■■■□□ 2.11
IRF3-231	ENST00000602190	RXRB	P28702	533 aa		28.21	■■■□□ 2.11
IRF3-231	ENST00000602190	TRIM52	Q96A61	297 aa		28.2	■■■□□ 2.1
IRF3-231	ENST00000602190	PNPLA6	Q8IY17	1366 aa		28.19	■■■□□ 2.1
IRF3-231	ENST00000602190	AFF2	P51816	1311 aa		28.18	■■■□□ 2.1
IRF3-231	ENST00000602190	LRRC59	Q96AG4	307 aa	Known RBP	28.16	■■■□□ 2.1
IRF3-231	ENST00000602190	RGS12	O14924	1447 aa		28.15	■■■□□ 2.1
IRF3-231	ENST00000602190	PTCH1	Q13635	1447 aa		28.15	■■■□□ 2.1
IRF3-231	ENST00000602190	KIF1B	O60333	1816 aa		28.13	■■■□□ 2.09
IRF3-231	ENST00000602190	C1orf167	Q5SNV9	1468 aa		28.12	■■■□□ 2.09
IRF3-231	ENST00000602190	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.11	■■■□□ 2.09
IRF3-231	ENST00000602190	NUTM2E	B1AL46	878 aa	Predicted RBP	28.11	■■■□□ 2.09
IRF3-231	ENST00000602190	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.11	■■■□□ 2.09
IRF3-231	ENST00000602190	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.07	■■■□□ 2.08
IRF3-231	ENST00000602190	RBM6	P78332	1123 aa	Known RBP	28.06	■■■□□ 2.08
IRF3-231	ENST00000602190	DDX17	Q92841	729 aa	Known RBP	28.06	■■■□□ 2.08
IRF3-231	ENST00000602190	SOS2	Q07890	1332 aa	Predicted RBP	28.06	■■■□□ 2.08
IRF3-231	ENST00000602190	ZNF326	Q5BKZ1	582 aa	Known RBP	28.04	■■■□□ 2.08
IRF3-231	ENST00000602190	ROBO2	Q9HCK4	1378 aa		28.02	■■■□□ 2.08
IRF3-231	ENST00000602190	C8orf37	Q96NL8	207 aa		28.01	■■■□□ 2.07
IRF3-231	ENST00000602190	QTRT2	Q9H974	415 aa	Known RBP	28.01	■■■□□ 2.07
IRF3-231	ENST00000602190	NAIP	Q13075	1403 aa		28.01	■■■□□ 2.07
IRF3-231	ENST00000602190	PPL	O60437	1756 aa		28	■■■□□ 2.07
IRF3-231	ENST00000602190	RRBP1	Q9P2E9	1410 aa	Known RBP	27.99	■■■□□ 2.07
IRF3-231	ENST00000602190	CDC42BPG	Q6DT37	1551 aa		27.96	■■■□□ 2.07
IRF3-231	ENST00000602190	ITGAE	P38570	1179 aa		27.96	■■■□□ 2.07
IRF3-231	ENST00000602190	MYOM2	P54296	1465 aa		27.95	■■■□□ 2.07
IRF3-231	ENST00000602190	HFM1	A2PYH4	1435 aa		27.95	■■■□□ 2.07
IRF3-231	ENST00000602190	ATRN	O75882	1429 aa		27.94	■■■□□ 2.06
IRF3-231	ENST00000602190	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.94	■■■□□ 2.06
IRF3-231	ENST00000602190	MARF1	Q9Y4F3	1742 aa	Known RBP	27.94	■■■□□ 2.06
IRF3-231	ENST00000602190	ORAI2	Q96SN7	254 aa		27.93	■■■□□ 2.06
IRF3-231	ENST00000602190	VGF	O15240	615 aa	Predicted RBP	27.92	■■■□□ 2.06
IRF3-231	ENST00000602190	RPGRIP1L	Q68CZ1	1315 aa		27.92	■■■□□ 2.06
IRF3-231	ENST00000602190	SRCAP	Q6ZRS2	3230 aa		27.9	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms