RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 RBM33Q96EV2 1170 aaKnown RBP35.7■■■■□ 3.31
GTPBP3-227ENST00000602056 RIMS2Q9UQ26 1411 aa35.67■■■■□ 3.3
GTPBP3-227ENST00000602056 PROSER2Q86WR7 435 aaPredicted RBP35.66■■■■□ 3.3
GTPBP3-227ENST00000602056 PLEKHG1Q9ULL1 1385 aa35.65■■■■□ 3.3
GTPBP3-227ENST00000602056 BCANQ96GW7 911 aa35.65■■■■□ 3.3
GTPBP3-227ENST00000602056 TMEM131LA2VDJ0 1609 aa35.65■■■■□ 3.3
GTPBP3-227ENST00000602056 GCC2Q8IWJ2 1684 aa35.64■■■■□ 3.3
GTPBP3-227ENST00000602056 NUP155O75694 1391 aa35.64■■■■□ 3.3
GTPBP3-227ENST00000602056 E9PCH4 1651 aa35.62■■■■□ 3.29
GTPBP3-227ENST00000602056 CHGAP10645 457 aaKnown RBP35.61■■■■□ 3.29
GTPBP3-227ENST00000602056 IQGAP3Q86VI3 1631 aa35.61■■■■□ 3.29
GTPBP3-227ENST00000602056 NWD1Q149M9 1564 aa35.6■■■■□ 3.29
GTPBP3-227ENST00000602056 FAM135BQ49AJ0 1406 aa35.6■■■■□ 3.29
GTPBP3-227ENST00000602056 PPP1R15AO75807 674 aaPredicted RBP35.6■■■■□ 3.29
GTPBP3-227ENST00000602056 NKTRP30414 1462 aaKnown RBP35.59■■■■□ 3.29
GTPBP3-227ENST00000602056 HDGFP51858 240 aaKnown RBP35.58■■■■□ 3.29
GTPBP3-227ENST00000602056 MYO5BQ9ULV0 1848 aa35.56■■■■□ 3.28
GTPBP3-227ENST00000602056 NUTM2DQ5VT03 806 aaPredicted RBP35.56■■■■□ 3.28
GTPBP3-227ENST00000602056 TBX22Q9Y458 520 aa35.54■■■■□ 3.28
GTPBP3-227ENST00000602056 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.53■■■■□ 3.28
GTPBP3-227ENST00000602056 ADAMTS13Q76LX8 1427 aa35.51■■■■□ 3.28
GTPBP3-227ENST00000602056 PHF23Q9BUL5 403 aaPredicted RBP35.5■■■■□ 3.27
GTPBP3-227ENST00000602056 MSH6P52701 1360 aa35.46■■■■□ 3.27
GTPBP3-227ENST00000602056 RRBP1Q9P2E9 1410 aaKnown RBP35.45■■■■□ 3.27
GTPBP3-227ENST00000602056 SLAIN2Q9P270 581 aa35.41■■■■□ 3.26
GTPBP3-227ENST00000602056 CHD2O14647 1828 aaKnown RBP35.41■■■■□ 3.26
GTPBP3-227ENST00000602056 RGS17Q9UGC6 210 aaPredicted RBP35.4■■■■□ 3.26
GTPBP3-227ENST00000602056 ROBO1Q9Y6N7 1651 aa35.39■■■■□ 3.26
GTPBP3-227ENST00000602056 PIK3R4Q99570 1358 aa35.36■■■■□ 3.25
GTPBP3-227ENST00000602056 NAIPQ13075 1403 aa35.35■■■■□ 3.25
GTPBP3-227ENST00000602056 NCOA3Q9Y6Q9 1424 aa35.35■■■■□ 3.25
GTPBP3-227ENST00000602056 DIP2AQ14689 1571 aa35.34■■■■□ 3.25
GTPBP3-227ENST00000602056 PTPRUQ92729 1446 aa35.33■■■■□ 3.25
GTPBP3-227ENST00000602056 AMOTL2Q9Y2J4 779 aa35.3■■■■□ 3.24
GTPBP3-227ENST00000602056 C14orf37Q86TY3 774 aa35.27■■■■□ 3.24
GTPBP3-227ENST00000602056 ZNF326Q5BKZ1 582 aaKnown RBP35.26■■■■□ 3.24
GTPBP3-227ENST00000602056 TRPM2O94759 1503 aa35.26■■■■□ 3.23
GTPBP3-227ENST00000602056 SPHKAPQ2M3C7 1700 aa35.26■■■■□ 3.23
GTPBP3-227ENST00000602056 C19orf44Q9H6X5 657 aa35.25■■■■□ 3.23
GTPBP3-227ENST00000602056 NRXN3Q9Y4C0 1643 aa35.23■■■■□ 3.23
GTPBP3-227ENST00000602056 SETBP1Q9Y6X0 1596 aa35.21■■■■□ 3.23
GTPBP3-227ENST00000602056 CADPS2Q86UW7 1296 aa35.21■■■■□ 3.23
GTPBP3-227ENST00000602056 METP08581 1390 aa35.2■■■■□ 3.23
GTPBP3-227ENST00000602056 CLTCL1P53675 1640 aa35.2■■■■□ 3.23
GTPBP3-227ENST00000602056 HFM1A2PYH4 1435 aa35.18■■■■□ 3.22
GTPBP3-227ENST00000602056 ATF3P18847 181 aa35.17■■■■□ 3.22
GTPBP3-227ENST00000602056 JCADQ9P266 1359 aa35.16■■■■□ 3.22
GTPBP3-227ENST00000602056 POTEAQ6S8J7 498 aa35.16■■■■□ 3.22
GTPBP3-227ENST00000602056 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.15■■■■□ 3.22
GTPBP3-227ENST00000602056 NEXMIFQ5QGS0 1516 aa35.15■■■■□ 3.22
GTPBP3-227ENST00000602056 TRIM52Q96A61 297 aa35.14■■■■□ 3.22
GTPBP3-227ENST00000602056 PHLPP1O60346 1717 aa35.14■■■■□ 3.22
GTPBP3-227ENST00000602056 XRN1Q8IZH2 1706 aaKnown RBP35.12■■■■□ 3.21
GTPBP3-227ENST00000602056 COL16A1Q07092 1604 aaPredicted RBP35.11■■■■□ 3.21
GTPBP3-227ENST00000602056 BRINP3Q76B58 766 aa35.09■■■■□ 3.21
GTPBP3-227ENST00000602056 SLC4A1APQ9BWU0 796 aaKnown RBP35.06■■■■□ 3.2
GTPBP3-227ENST00000602056 DCCP43146 1447 aa35.06■■■■□ 3.2
GTPBP3-227ENST00000602056 AHDC1Q5TGY3 1603 aaPredicted RBP35.04■■■■□ 3.2
GTPBP3-227ENST00000602056 MST1RQ04912 1400 aa35■■■■□ 3.19
GTPBP3-227ENST00000602056 LRP6O75581 1613 aa35■■■■□ 3.19
GTPBP3-227ENST00000602056 FOXD1Q16676 465 aa34.98■■■■□ 3.19
GTPBP3-227ENST00000602056 SPATA31A6Q5VVP1 1343 aa34.98■■■■□ 3.19
GTPBP3-227ENST00000602056 VGFO15240 615 aaPredicted RBP34.97■■■■□ 3.19
GTPBP3-227ENST00000602056 ADGRL3Q9HAR2 1447 aa34.97■■■■□ 3.19
GTPBP3-227ENST00000602056 RPGRIP1LQ68CZ1 1315 aa34.95■■■■□ 3.19
GTPBP3-227ENST00000602056 ASXL1Q8IXJ9 1541 aa34.94■■■■□ 3.18
GTPBP3-227ENST00000602056 KIF1BO60333 1816 aa34.94■■■■□ 3.18
GTPBP3-227ENST00000602056 ROBO2Q9HCK4 1378 aa34.9■■■■□ 3.18
GTPBP3-227ENST00000602056 PTCH1Q13635 1447 aa34.88■■■■□ 3.17
GTPBP3-227ENST00000602056 DDX17Q92841 729 aaKnown RBP34.87■■■■□ 3.17
GTPBP3-227ENST00000602056 SETD5Q9C0A6 1442 aa34.86■■■■□ 3.17
GTPBP3-227ENST00000602056 SETD1AO15047 1707 aaKnown RBP34.86■■■■□ 3.17
GTPBP3-227ENST00000602056 MEX3CQ5U5Q3 659 aaKnown RBP34.85■■■■□ 3.17
GTPBP3-227ENST00000602056 SHPRHQ149N8 1683 aa34.85■■■■□ 3.17
GTPBP3-227ENST00000602056 NALCNQ8IZF0 1738 aa34.84■■■■□ 3.17
GTPBP3-227ENST00000602056 PRAG1Q86YV5 1406 aa34.83■■■■□ 3.17
GTPBP3-227ENST00000602056 MPHOSPH9Q99550 1183 aa34.82■■■■□ 3.16
GTPBP3-227ENST00000602056 C1orf167Q5SNV9 1468 aa34.81■■■■□ 3.16
GTPBP3-227ENST00000602056 NUTM2BA6NNL0 878 aaPredicted RBP34.8■■■■□ 3.16
GTPBP3-227ENST00000602056 NUTM2EB1AL46 878 aaPredicted RBP34.8■■■■□ 3.16
GTPBP3-227ENST00000602056 NUTM2AQ8IVF1 878 aaPredicted RBP34.8■■■■□ 3.16
GTPBP3-227ENST00000602056 ADGRF5Q8IZF2 1346 aa34.8■■■■□ 3.16
GTPBP3-227ENST00000602056 NHSL1Q5SYE7 1610 aa34.78■■■■□ 3.16
GTPBP3-227ENST00000602056 LRRC59Q96AG4 307 aaKnown RBP34.78■■■■□ 3.16
GTPBP3-227ENST00000602056 SPATA31E1Q6ZUB1 1445 aa34.78■■■■□ 3.16
GTPBP3-227ENST00000602056 ZNF772Q68DY9 489 aaPredicted RBP34.77■■■■□ 3.16
GTPBP3-227ENST00000602056 CCDC144AA2RUR9 1427 aa34.77■■■■□ 3.16
GTPBP3-227ENST00000602056 PPLO60437 1756 aa34.77■■■■□ 3.16
GTPBP3-227ENST00000602056 RGL3Q3MIN7 710 aa34.76■■■■□ 3.16
GTPBP3-227ENST00000602056 ORAI2Q96SN7 254 aa34.74■■■■□ 3.15
GTPBP3-227ENST00000602056 PNPLA6Q8IY17 1366 aa34.73■■■■□ 3.15
GTPBP3-227ENST00000602056 ANKRD30BQ9BXX2 1392 aa34.67■■■■□ 3.14
GTPBP3-227ENST00000602056 AFF2P51816 1311 aa34.66■■■■□ 3.14
GTPBP3-227ENST00000602056 SOS2Q07890 1332 aaPredicted RBP34.65■■■■□ 3.14
GTPBP3-227ENST00000602056 STK26Q9P289 416 aa34.63■■■■□ 3.13
GTPBP3-227ENST00000602056 LAMC1P11047 1609 aa34.62■■■■□ 3.13
GTPBP3-227ENST00000602056 LRPPRCP42704 1394 aaKnown RBP34.62■■■■□ 3.13
GTPBP3-227ENST00000602056 RXRBP28702 533 aa34.61■■■■□ 3.13
GTPBP3-227ENST00000602056 TMEM132EQ6IEE7 984 aa34.61■■■■□ 3.13
GTPBP3-227ENST00000602056 WAPLQ7Z5K2 1190 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms