RNA–Protein interactions for RNA: ENST00000601708.1

LINC01233-203, Transcript of long intergenic non-protein coding RNA 1233, humanhuman

TSL 3 BASIC

Gene LINC01233, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01233-203ENST00000601708 JCADQ9P266 1359 aa22.71■■□□□ 1.23
LINC01233-203ENST00000601708 ANKRD30AQ9BXX3 1397 aa22.67■■□□□ 1.22
LINC01233-203ENST00000601708 COL16A1Q07092 1604 aaPredicted RBP22.67■■□□□ 1.22
LINC01233-203ENST00000601708 MYO5BQ9ULV0 1848 aa22.66■■□□□ 1.22
LINC01233-203ENST00000601708 ZFYVE9O95405 1425 aa22.65■■□□□ 1.22
LINC01233-203ENST00000601708 PLEKHG1Q9ULL1 1385 aa22.64■■□□□ 1.22
LINC01233-203ENST00000601708 NCOA3Q9Y6Q9 1424 aa22.64■■□□□ 1.21
LINC01233-203ENST00000601708 RPRD2Q5VT52 1461 aaKnown RBP22.63■■□□□ 1.21
LINC01233-203ENST00000601708 LOC105371045A0A1W2PR82 267 aa22.63■■□□□ 1.21
LINC01233-203ENST00000601708 FGD6Q6ZV73 1430 aa22.63■■□□□ 1.21
LINC01233-203ENST00000601708 CHIC2Q9UKJ5 165 aa22.62■■□□□ 1.21
LINC01233-203ENST00000601708 BCANQ96GW7 911 aa22.61■■□□□ 1.21
LINC01233-203ENST00000601708 TBX22Q9Y458 520 aa22.61■■□□□ 1.21
LINC01233-203ENST00000601708 SPATA31A6Q5VVP1 1343 aa22.6■■□□□ 1.21
LINC01233-203ENST00000601708 TMEM131LA2VDJ0 1609 aa22.6■■□□□ 1.21
LINC01233-203ENST00000601708 LRP6O75581 1613 aa22.6■■□□□ 1.21
LINC01233-203ENST00000601708 GCC2Q8IWJ2 1684 aa22.59■■□□□ 1.21
LINC01233-203ENST00000601708 HDGFP51858 240 aaKnown RBP22.59■■□□□ 1.21
LINC01233-203ENST00000601708 ADGRL2O95490 1459 aa22.58■■□□□ 1.2
LINC01233-203ENST00000601708 RIMS2Q9UQ26 1411 aa22.57■■□□□ 1.2
LINC01233-203ENST00000601708 UPF1Q92900 1129 aaKnown RBP eCLIP22.57■■□□□ 1.2
LINC01233-203ENST00000601708 SHPRHQ149N8 1683 aa22.57■■□□□ 1.2
LINC01233-203ENST00000601708 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.57■■□□□ 1.2
LINC01233-203ENST00000601708 AHDC1Q5TGY3 1603 aaPredicted RBP22.57■■□□□ 1.2
LINC01233-203ENST00000601708 ZNF772Q68DY9 489 aaPredicted RBP22.56■■□□□ 1.2
LINC01233-203ENST00000601708 C19orf44Q9H6X5 657 aa22.53■■□□□ 1.2
LINC01233-203ENST00000601708 ADAMTS13Q76LX8 1427 aa22.53■■□□□ 1.2
LINC01233-203ENST00000601708 PPP1R15AO75807 674 aaPredicted RBP22.52■■□□□ 1.2
LINC01233-203ENST00000601708 CADPS2Q86UW7 1296 aa22.52■■□□□ 1.2
LINC01233-203ENST00000601708 PIK3R4Q99570 1358 aa22.51■■□□□ 1.19
LINC01233-203ENST00000601708 ANKRD50Q9ULJ7 1429 aa22.51■■□□□ 1.19
LINC01233-203ENST00000601708 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.51■■□□□ 1.19
LINC01233-203ENST00000601708 APLP2Q06481 763 aa22.5■■□□□ 1.19
LINC01233-203ENST00000601708 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
LINC01233-203ENST00000601708 MEX3CQ5U5Q3 659 aaKnown RBP22.49■■□□□ 1.19
LINC01233-203ENST00000601708 ATF3P18847 181 aa22.47■■□□□ 1.19
LINC01233-203ENST00000601708 C14orf37Q86TY3 774 aa22.47■■□□□ 1.19
LINC01233-203ENST00000601708 TRIM52Q96A61 297 aa22.47■■□□□ 1.19
LINC01233-203ENST00000601708 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
LINC01233-203ENST00000601708 RXRBP28702 533 aa22.45■■□□□ 1.18
LINC01233-203ENST00000601708 E9PCH4 1651 aa22.45■■□□□ 1.18
LINC01233-203ENST00000601708 UNC13BO14795 1591 aa22.44■■□□□ 1.18
LINC01233-203ENST00000601708 BRINP3Q76B58 766 aa22.44■■□□□ 1.18
LINC01233-203ENST00000601708 TRPM2O94759 1503 aa22.41■■□□□ 1.18
LINC01233-203ENST00000601708 PTPRUQ92729 1446 aa22.41■■□□□ 1.18
LINC01233-203ENST00000601708 NUTM2DQ5VT03 806 aaPredicted RBP22.41■■□□□ 1.18
LINC01233-203ENST00000601708 AMOTL2Q9Y2J4 779 aa22.41■■□□□ 1.18
LINC01233-203ENST00000601708 DCCP43146 1447 aa22.4■■□□□ 1.18
LINC01233-203ENST00000601708 CHGAP10645 457 aaKnown RBP22.4■■□□□ 1.18
LINC01233-203ENST00000601708 SETD5Q9C0A6 1442 aa22.4■■□□□ 1.18
LINC01233-203ENST00000601708 NHSL1Q5SYE7 1610 aa22.39■■□□□ 1.17
LINC01233-203ENST00000601708 ASXL1Q8IXJ9 1541 aa22.36■■□□□ 1.17
LINC01233-203ENST00000601708 IQGAP3Q86VI3 1631 aa22.36■■□□□ 1.17
LINC01233-203ENST00000601708 NUTM2BA6NNL0 878 aaPredicted RBP22.36■■□□□ 1.17
LINC01233-203ENST00000601708 NUTM2EB1AL46 878 aaPredicted RBP22.36■■□□□ 1.17
LINC01233-203ENST00000601708 FAM50AQ14320 339 aaKnown RBP22.36■■□□□ 1.17
LINC01233-203ENST00000601708 NUTM2AQ8IVF1 878 aaPredicted RBP22.36■■□□□ 1.17
LINC01233-203ENST00000601708 XRN1Q8IZH2 1706 aaKnown RBP22.36■■□□□ 1.17
LINC01233-203ENST00000601708 AFF2P51816 1311 aa22.35■■□□□ 1.17
LINC01233-203ENST00000601708 NRXN3Q9Y4C0 1643 aa22.35■■□□□ 1.17
LINC01233-203ENST00000601708 MST1RQ04912 1400 aa22.34■■□□□ 1.17
LINC01233-203ENST00000601708 LRRC59Q96AG4 307 aaKnown RBP22.33■■□□□ 1.17
LINC01233-203ENST00000601708 SETBP1Q9Y6X0 1596 aa22.32■■□□□ 1.16
LINC01233-203ENST00000601708 RBM6P78332 1123 aaKnown RBP22.29■■□□□ 1.16
LINC01233-203ENST00000601708 ROCK1Q13464 1354 aa22.28■■□□□ 1.16
LINC01233-203ENST00000601708 QTRT2Q9H974 415 aaKnown RBP22.28■■□□□ 1.16
LINC01233-203ENST00000601708 RGS12O14924 1447 aa22.28■■□□□ 1.16
LINC01233-203ENST00000601708 PNPLA6Q8IY17 1366 aa22.26■■□□□ 1.15
LINC01233-203ENST00000601708 SRCAPQ6ZRS2 3230 aa22.25■■□□□ 1.15
LINC01233-203ENST00000601708 METP08581 1390 aa22.25■■□□□ 1.15
LINC01233-203ENST00000601708 NUP155O75694 1391 aa22.24■■□□□ 1.15
LINC01233-203ENST00000601708 LAMC1P11047 1609 aa22.24■■□□□ 1.15
LINC01233-203ENST00000601708 ADGRL3Q9HAR2 1447 aa22.23■■□□□ 1.15
LINC01233-203ENST00000601708 DDX17Q92841 729 aaKnown RBP22.23■■□□□ 1.15
LINC01233-203ENST00000601708 C8orf37Q96NL8 207 aa22.23■■□□□ 1.15
LINC01233-203ENST00000601708 NALCNQ8IZF0 1738 aa22.23■■□□□ 1.15
LINC01233-203ENST00000601708 SPHKAPQ2M3C7 1700 aa22.22■■□□□ 1.15
LINC01233-203ENST00000601708 NGLY1Q96IV0 654 aa22.18■■□□□ 1.14
LINC01233-203ENST00000601708 C1orf167Q5SNV9 1468 aa22.16■■□□□ 1.14
LINC01233-203ENST00000601708 SOS2Q07890 1332 aaPredicted RBP22.15■■□□□ 1.14
LINC01233-203ENST00000601708 NEXMIFQ5QGS0 1516 aa22.15■■□□□ 1.14
LINC01233-203ENST00000601708 ATAD2Q6PL18 1390 aa22.14■■□□□ 1.14
LINC01233-203ENST00000601708 ADAMTS2O95450 1211 aa22.14■■□□□ 1.13
LINC01233-203ENST00000601708 ZNF326Q5BKZ1 582 aaKnown RBP22.14■■□□□ 1.13
LINC01233-203ENST00000601708 FNBP4Q8N3X1 1017 aaPredicted RBP22.13■■□□□ 1.13
LINC01233-203ENST00000601708 USP21Q9UK80 565 aa22.11■■□□□ 1.13
LINC01233-203ENST00000601708 PTCH1Q13635 1447 aa22.11■■□□□ 1.13
LINC01233-203ENST00000601708 TRPC5Q9UL62 973 aaPredicted RBP22.1■■□□□ 1.13
LINC01233-203ENST00000601708 CLTCL1P53675 1640 aa22.09■■□□□ 1.13
LINC01233-203ENST00000601708 COL22A1Q8NFW1 1626 aaPredicted RBP22.09■■□□□ 1.13
LINC01233-203ENST00000601708 KIF1BO60333 1816 aa22.09■■□□□ 1.13
LINC01233-203ENST00000601708 EP400Q96L91 3159 aa22.09■■□□□ 1.13
LINC01233-203ENST00000601708 ORAI2Q96SN7 254 aa22.09■■□□□ 1.13
LINC01233-203ENST00000601708 ATRNO75882 1429 aa22.07■■□□□ 1.12
LINC01233-203ENST00000601708 PRAG1Q86YV5 1406 aa22.07■■□□□ 1.12
LINC01233-203ENST00000601708 ROBO2Q9HCK4 1378 aa22.06■■□□□ 1.12
LINC01233-203ENST00000601708 MARF1Q9Y4F3 1742 aaKnown RBP22.04■■□□□ 1.12
LINC01233-203ENST00000601708 FOXD1Q16676 465 aa22.04■■□□□ 1.12
LINC01233-203ENST00000601708 CCDC125Q86Z20 511 aa22.04■■□□□ 1.12
LINC01233-203ENST00000601708 ZRANB1Q9UGI0 708 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms