RNA–Protein interactions for RNA: ENST00000601549.1

KCNN4-208, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 3

Gene KCNN4, Length 1,093 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-208ENST00000601549 A2ML1A8K2U0 1454 aa25.94■■□□□ 1.74
KCNN4-208ENST00000601549 CHGAP10645 457 aaKnown RBP25.94■■□□□ 1.74
KCNN4-208ENST00000601549 DCAF11Q8TEB1 546 aa25.94■■□□□ 1.74
KCNN4-208ENST00000601549 ZNF326Q5BKZ1 582 aaKnown RBP25.92■■□□□ 1.74
KCNN4-208ENST00000601549 ZNF142P52746 1687 aaPredicted RBP25.92■■□□□ 1.74
KCNN4-208ENST00000601549 CEP170BQ9Y4F5 1589 aaPredicted RBP25.91■■□□□ 1.74
KCNN4-208ENST00000601549 VGFO15240 615 aaPredicted RBP25.91■■□□□ 1.74
KCNN4-208ENST00000601549 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.91■■□□□ 1.74
KCNN4-208ENST00000601549 THEMISQ8N1K5 641 aaPredicted RBP25.9■■□□□ 1.74
KCNN4-208ENST00000601549 PRAG1Q86YV5 1406 aa25.87■■□□□ 1.73
KCNN4-208ENST00000601549 NRXN1Q9ULB1 1477 aa25.86■■□□□ 1.73
KCNN4-208ENST00000601549 UBR1Q8IWV7 1749 aa25.85■■□□□ 1.73
KCNN4-208ENST00000601549 IFT172Q9UG01 1749 aa25.85■■□□□ 1.73
KCNN4-208ENST00000601549 NEXMIFQ5QGS0 1516 aa25.85■■□□□ 1.73
KCNN4-208ENST00000601549 TMEM2Q9UHN6 1383 aa25.84■■□□□ 1.73
KCNN4-208ENST00000601549 HSPA2P54652 639 aa25.84■■□□□ 1.73
KCNN4-208ENST00000601549 PPLO60437 1756 aa25.83■■□□□ 1.73
KCNN4-208ENST00000601549 SLIT1O75093 1534 aa25.83■■□□□ 1.72
KCNN4-208ENST00000601549 KDM2AQ9Y2K7 1162 aa25.82■■□□□ 1.72
KCNN4-208ENST00000601549 RIMS2Q9UQ26 1411 aa25.81■■□□□ 1.72
KCNN4-208ENST00000601549 ARHGAP23Q9P227 1491 aa25.81■■□□□ 1.72
KCNN4-208ENST00000601549 RALGAPBQ86X10 1494 aa25.79■■□□□ 1.72
KCNN4-208ENST00000601549 EID1Q9Y6B2 187 aa25.78■■□□□ 1.72
KCNN4-208ENST00000601549 PIK3C2GO75747 1445 aa25.78■■□□□ 1.72
KCNN4-208ENST00000601549 NBPF8Q3BBV2 869 aa25.77■■□□□ 1.72
KCNN4-208ENST00000601549 KIAA1210Q9ULL0 1709 aa25.77■■□□□ 1.72
KCNN4-208ENST00000601549 MYO5BQ9ULV0 1848 aa25.74■■□□□ 1.71
KCNN4-208ENST00000601549 GPRASP1Q5JY77 1395 aa25.74■■□□□ 1.71
KCNN4-208ENST00000601549 ADGRF5Q8IZF2 1346 aa25.74■■□□□ 1.71
KCNN4-208ENST00000601549 LAMC1P11047 1609 aa25.73■■□□□ 1.71
KCNN4-208ENST00000601549 CERKQ8TCT0 537 aa25.71■■□□□ 1.71
KCNN4-208ENST00000601549 C14orf93Q9H972 538 aaKnown RBP25.71■■□□□ 1.71
KCNN4-208ENST00000601549 DMRT2Q9Y5R5 561 aa25.71■■□□□ 1.71
KCNN4-208ENST00000601549 TRPM1Q7Z4N2 1603 aa25.7■■□□□ 1.71
KCNN4-208ENST00000601549 PLEKHG1Q9ULL1 1385 aa25.7■■□□□ 1.71
KCNN4-208ENST00000601549 ROCK2O75116 1388 aaKnown RBP25.69■■□□□ 1.7
KCNN4-208ENST00000601549 SCAF11Q99590 1463 aaKnown RBP25.68■■□□□ 1.7
KCNN4-208ENST00000601549 TXNDC2Q86VQ3 553 aa25.68■■□□□ 1.7
KCNN4-208ENST00000601549 ANKLE2Q86XL3 938 aa25.68■■□□□ 1.7
KCNN4-208ENST00000601549 SETBP1Q9Y6X0 1596 aa25.68■■□□□ 1.7
KCNN4-208ENST00000601549 STRCQ7RTU9 1775 aa25.64■■□□□ 1.69
KCNN4-208ENST00000601549 CARD11Q9BXL7 1154 aa25.63■■□□□ 1.69
KCNN4-208ENST00000601549 LTKP29376 864 aa25.62■■□□□ 1.69
KCNN4-208ENST00000601549 EIF4G2P78344 907 aaKnown RBP eCLIP25.62■■□□□ 1.69
KCNN4-208ENST00000601549 POLR1AO95602 1720 aaPredicted RBP25.62■■□□□ 1.69
KCNN4-208ENST00000601549 NCKAP5LQ9HCH0 1330 aa25.62■■□□□ 1.69
KCNN4-208ENST00000601549 DIP2AQ14689 1571 aa25.61■■□□□ 1.69
KCNN4-208ENST00000601549 MED14O60244 1454 aa25.6■■□□□ 1.69
KCNN4-208ENST00000601549 CFAP70Q5T0N1 1121 aa25.6■■□□□ 1.69
KCNN4-208ENST00000601549 SLC24A1O60721 1099 aa25.59■■□□□ 1.69
KCNN4-208ENST00000601549 ALKQ9UM73 1620 aa25.59■■□□□ 1.69
KCNN4-208ENST00000601549 NUTM2DQ5VT03 806 aaPredicted RBP25.58■■□□□ 1.69
KCNN4-208ENST00000601549 TBX22Q9Y458 520 aa25.58■■□□□ 1.69
KCNN4-208ENST00000601549 EIF3AQ14152 1382 aaKnown RBP25.57■■□□□ 1.68
KCNN4-208ENST00000601549 NBPF1Q3BBV0 1214 aa25.57■■□□□ 1.68
KCNN4-208ENST00000601549 ADGRB1O14514 1584 aa25.56■■□□□ 1.68
KCNN4-208ENST00000601549 PIK3R4Q99570 1358 aa25.56■■□□□ 1.68
KCNN4-208ENST00000601549 USP47Q96K76 1375 aa25.55■■□□□ 1.68
KCNN4-208ENST00000601549 NPHP4O75161 1426 aaPredicted RBP25.54■■□□□ 1.68
KCNN4-208ENST00000601549 ADAMTS13Q76LX8 1427 aa25.54■■□□□ 1.68
KCNN4-208ENST00000601549 NRXN3Q9Y4C0 1643 aa25.53■■□□□ 1.68
KCNN4-208ENST00000601549 BCANQ96GW7 911 aa25.52■■□□□ 1.68
KCNN4-208ENST00000601549 IQGAP1P46940 1657 aa25.5■■□□□ 1.67
KCNN4-208ENST00000601549 LRPPRCP42704 1394 aaKnown RBP25.49■■□□□ 1.67
KCNN4-208ENST00000601549 SIRT1Q96EB6 747 aa25.49■■□□□ 1.67
KCNN4-208ENST00000601549 ABCC11Q96J66 1382 aa25.48■■□□□ 1.67
KCNN4-208ENST00000601549 SETD1AO15047 1707 aaKnown RBP25.48■■□□□ 1.67
KCNN4-208ENST00000601549 YTHDC2Q9H6S0 1430 aaKnown RBP25.47■■□□□ 1.67
KCNN4-208ENST00000601549 ZNF316A6NFI3 1004 aaPredicted RBP25.47■■□□□ 1.67
KCNN4-208ENST00000601549 HSPA5P11021 654 aaKnown RBP25.47■■□□□ 1.67
KCNN4-208ENST00000601549 DLC1Q96QB1 1528 aa25.46■■□□□ 1.67
KCNN4-208ENST00000601549 TECPR2O15040 1411 aa25.46■■□□□ 1.67
KCNN4-208ENST00000601549 ASXL1Q8IXJ9 1541 aa25.45■■□□□ 1.66
KCNN4-208ENST00000601549 SBNO2Q9Y2G9 1366 aa25.44■■□□□ 1.66
KCNN4-208ENST00000601549 TMEM132EQ6IEE7 984 aa25.43■■□□□ 1.66
KCNN4-208ENST00000601549 METP08581 1390 aa25.43■■□□□ 1.66
KCNN4-208ENST00000601549 FAM135BQ49AJ0 1406 aa25.41■■□□□ 1.66
KCNN4-208ENST00000601549 SLC26A8Q96RN1 970 aa25.4■■□□□ 1.66
KCNN4-208ENST00000601549 ST20-MTHFSA0A0A6YYL1 179 aa25.39■■□□□ 1.66
KCNN4-208ENST00000601549 CENPJQ9HC77 1338 aaPredicted RBP25.38■■□□□ 1.65
KCNN4-208ENST00000601549 KNDC1Q76NI1 1749 aa25.38■■□□□ 1.65
KCNN4-208ENST00000601549 TRAK1Q9UPV9 953 aa25.37■■□□□ 1.65
KCNN4-208ENST00000601549 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
KCNN4-208ENST00000601549 CPS1P31327 1500 aa25.36■■□□□ 1.65
KCNN4-208ENST00000601549 CDCA8Q53HL2 280 aa25.35■■□□□ 1.65
KCNN4-208ENST00000601549 TESK2Q96S53 571 aa25.33■■□□□ 1.65
KCNN4-208ENST00000601549 TMF1P82094 1093 aa25.32■■□□□ 1.64
KCNN4-208ENST00000601549 STK26Q9P289 416 aa25.32■■□□□ 1.64
KCNN4-208ENST00000601549 AMOTL2Q9Y2J4 779 aa25.32■■□□□ 1.64
KCNN4-208ENST00000601549 ZNF335Q9H4Z2 1342 aaPredicted RBP25.32■■□□□ 1.64
KCNN4-208ENST00000601549 ARHGEF28Q8N1W1 1705 aaKnown RBP25.32■■□□□ 1.64
KCNN4-208ENST00000601549 KCNA6P17658 529 aa25.31■■□□□ 1.64
KCNN4-208ENST00000601549 PUS7Q96PZ0 661 aaKnown RBP25.31■■□□□ 1.64
KCNN4-208ENST00000601549 POGKQ9P215 609 aa25.3■■□□□ 1.64
KCNN4-208ENST00000601549 PTPRUQ92729 1446 aa25.29■■□□□ 1.64
KCNN4-208ENST00000601549 XRN1Q8IZH2 1706 aaKnown RBP25.29■■□□□ 1.64
KCNN4-208ENST00000601549 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
KCNN4-208ENST00000601549 NWD1Q149M9 1564 aa25.28■■□□□ 1.64
KCNN4-208ENST00000601549 PRAM1Q96QH2 718 aa25.28■■□□□ 1.64
KCNN4-208ENST00000601549 NKTRP30414 1462 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms