RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 HSPA5P11021 654 aaKnown RBP19.31■□□□□ 0.68
IRF3-229ENST00000601373 PIK3C2BO00750 1634 aa19.29■□□□□ 0.68
IRF3-229ENST00000601373 SYNMO15061 1565 aa19.29■□□□□ 0.68
IRF3-229ENST00000601373 ADGRB3O60242 1522 aa19.29■□□□□ 0.68
IRF3-229ENST00000601373 ERVK-7P63135 1459 aa19.28■□□□□ 0.68
IRF3-229ENST00000601373 CHGAP10645 457 aaKnown RBP19.28■□□□□ 0.68
IRF3-229ENST00000601373 ZMYM3Q14202 1370 aa19.28■□□□□ 0.68
IRF3-229ENST00000601373 CARD11Q9BXL7 1154 aa19.27■□□□□ 0.68
IRF3-229ENST00000601373 IDI1Q13907 227 aa19.26■□□□□ 0.67
IRF3-229ENST00000601373 ROCK2O75116 1388 aaKnown RBP19.26■□□□□ 0.67
IRF3-229ENST00000601373 MYOM2P54296 1465 aa19.26■□□□□ 0.67
IRF3-229ENST00000601373 TRPM1Q7Z4N2 1603 aa19.25■□□□□ 0.67
IRF3-229ENST00000601373 GPRASP1Q5JY77 1395 aa19.25■□□□□ 0.67
IRF3-229ENST00000601373 FBXO31Q5XUX0 539 aaPredicted RBP19.25■□□□□ 0.67
IRF3-229ENST00000601373 HIRIP3Q9BW71 556 aaPredicted RBP19.24■□□□□ 0.67
IRF3-229ENST00000601373 MROH2AA6NES4 1674 aa19.24■□□□□ 0.67
IRF3-229ENST00000601373 USP47Q96K76 1375 aa19.23■□□□□ 0.67
IRF3-229ENST00000601373 LAMC1P11047 1609 aa19.22■□□□□ 0.67
IRF3-229ENST00000601373 IFT172Q9UG01 1749 aa19.21■□□□□ 0.67
IRF3-229ENST00000601373 VGFO15240 615 aaPredicted RBP19.19■□□□□ 0.66
IRF3-229ENST00000601373 NBPF1Q3BBV0 1214 aa19.19■□□□□ 0.66
IRF3-229ENST00000601373 KIAA1210Q9ULL0 1709 aa19.19■□□□□ 0.66
IRF3-229ENST00000601373 NRXN1Q9ULB1 1477 aa19.18■□□□□ 0.66
IRF3-229ENST00000601373 PPLO60437 1756 aa19.17■□□□□ 0.66
IRF3-229ENST00000601373 STAG3Q9UJ98 1225 aa19.17■□□□□ 0.66
IRF3-229ENST00000601373 ADGRF5Q8IZF2 1346 aa19.17■□□□□ 0.66
IRF3-229ENST00000601373 ZFYVE9O95405 1425 aa19.17■□□□□ 0.66
IRF3-229ENST00000601373 TMEM131LA2VDJ0 1609 aa19.16■□□□□ 0.66
IRF3-229ENST00000601373 UBAP1LF5GYI3 381 aa19.16■□□□□ 0.66
IRF3-229ENST00000601373 NCKAP5LQ9HCH0 1330 aa19.15■□□□□ 0.66
IRF3-229ENST00000601373 TNRQ92752 1358 aa19.15■□□□□ 0.66
IRF3-229ENST00000601373 ZNF335Q9H4Z2 1342 aaPredicted RBP19.14■□□□□ 0.65
IRF3-229ENST00000601373 DDX10Q13206 875 aaKnown RBP19.13■□□□□ 0.65
IRF3-229ENST00000601373 NEXMIFQ5QGS0 1516 aa19.13■□□□□ 0.65
IRF3-229ENST00000601373 ZNF142P52746 1687 aaPredicted RBP19.12■□□□□ 0.65
IRF3-229ENST00000601373 PIK3C2GO75747 1445 aa19.11■□□□□ 0.65
IRF3-229ENST00000601373 CCDC7Q96M83 1385 aa19.11■□□□□ 0.65
IRF3-229ENST00000601373 WASHC2AQ641Q2 1341 aa19.11■□□□□ 0.65
IRF3-229ENST00000601373 ST20-MTHFSA0A0A6YYL1 179 aa19.11■□□□□ 0.65
IRF3-229ENST00000601373 C14orf93Q9H972 538 aaKnown RBP19.11■□□□□ 0.65
IRF3-229ENST00000601373 HDGFP51858 240 aaKnown RBP19.1■□□□□ 0.65
IRF3-229ENST00000601373 CFAP70Q5T0N1 1121 aa19.1■□□□□ 0.65
IRF3-229ENST00000601373 CEP170BQ9Y4F5 1589 aaPredicted RBP19.1■□□□□ 0.65
IRF3-229ENST00000601373 A2ML1A8K2U0 1454 aa19.09■□□□□ 0.65
IRF3-229ENST00000601373 SCAF11Q99590 1463 aaKnown RBP19.09■□□□□ 0.65
IRF3-229ENST00000601373 NLRP1Q9C000 1473 aa19.09■□□□□ 0.65
IRF3-229ENST00000601373 POLR1AO95602 1720 aaPredicted RBP19.08■□□□□ 0.65
IRF3-229ENST00000601373 MYO3AQ8NEV4 1616 aa19.08■□□□□ 0.65
IRF3-229ENST00000601373 MYO5BQ9ULV0 1848 aa19.08■□□□□ 0.64
IRF3-229ENST00000601373 KDM5AP29375 1690 aaKnown RBP19.08■□□□□ 0.64
IRF3-229ENST00000601373 SETBP1Q9Y6X0 1596 aa19.07■□□□□ 0.64
IRF3-229ENST00000601373 C11orf95C9JLR9 678 aaPredicted RBP19.07■□□□□ 0.64
IRF3-229ENST00000601373 SLC24A1O60721 1099 aa19.07■□□□□ 0.64
IRF3-229ENST00000601373 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.07■□□□□ 0.64
IRF3-229ENST00000601373 EIF3AQ14152 1382 aaKnown RBP19.06■□□□□ 0.64
IRF3-229ENST00000601373 KIF7Q2M1P5 1343 aa19.05■□□□□ 0.64
IRF3-229ENST00000601373 IQGAP1P46940 1657 aa19.05■□□□□ 0.64
IRF3-229ENST00000601373 TOM1O60784 492 aa19.04■□□□□ 0.64
IRF3-229ENST00000601373 RIMS2Q9UQ26 1411 aa19.04■□□□□ 0.64
IRF3-229ENST00000601373 MIER1Q8N108 512 aa19.03■□□□□ 0.64
IRF3-229ENST00000601373 NUTM2DQ5VT03 806 aaPredicted RBP19.02■□□□□ 0.64
IRF3-229ENST00000601373 CPS1P31327 1500 aa19.01■□□□□ 0.63
IRF3-229ENST00000601373 TMF1P82094 1093 aa19.01■□□□□ 0.63
IRF3-229ENST00000601373 TESK2Q96S53 571 aa19.01■□□□□ 0.63
IRF3-229ENST00000601373 ADGRB1O14514 1584 aa18.98■□□□□ 0.63
IRF3-229ENST00000601373 UBR1Q8IWV7 1749 aa18.98■□□□□ 0.63
IRF3-229ENST00000601373 CDCA8Q53HL2 280 aa18.98■□□□□ 0.63
IRF3-229ENST00000601373 TMEM2Q9UHN6 1383 aa18.97■□□□□ 0.63
IRF3-229ENST00000601373 ANP32CO43423 234 aa18.96■□□□□ 0.63
IRF3-229ENST00000601373 HSPA1LP34931 641 aa18.96■□□□□ 0.63
IRF3-229ENST00000601373 THEMISQ8N1K5 641 aaPredicted RBP18.96■□□□□ 0.63
IRF3-229ENST00000601373 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
IRF3-229ENST00000601373 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
IRF3-229ENST00000601373 TMEM132EQ6IEE7 984 aa18.94■□□□□ 0.62
IRF3-229ENST00000601373 POLR3GLQ9BT43 218 aa18.94■□□□□ 0.62
IRF3-229ENST00000601373 SBNO2Q9Y2G9 1366 aa18.93■□□□□ 0.62
IRF3-229ENST00000601373 ALKQ9UM73 1620 aa18.93■□□□□ 0.62
IRF3-229ENST00000601373 PIP4K2BP78356 416 aa18.93■□□□□ 0.62
IRF3-229ENST00000601373 EID1Q9Y6B2 187 aa18.93■□□□□ 0.62
IRF3-229ENST00000601373 CENPJQ9HC77 1338 aaPredicted RBP18.93■□□□□ 0.62
IRF3-229ENST00000601373 TRAK1Q9UPV9 953 aa18.92■□□□□ 0.62
IRF3-229ENST00000601373 MED1Q15648 1581 aaPredicted RBP18.92■□□□□ 0.62
IRF3-229ENST00000601373 SLIT1O75093 1534 aa18.9■□□□□ 0.62
IRF3-229ENST00000601373 ARHGAP23Q9P227 1491 aa18.9■□□□□ 0.62
IRF3-229ENST00000601373 TXNDC2Q86VQ3 553 aa18.89■□□□□ 0.61
IRF3-229ENST00000601373 PLEKHG1Q9ULL1 1385 aa18.88■□□□□ 0.61
IRF3-229ENST00000601373 YTHDC2Q9H6S0 1430 aaKnown RBP18.88■□□□□ 0.61
IRF3-229ENST00000601373 MED14O60244 1454 aa18.88■□□□□ 0.61
IRF3-229ENST00000601373 ASXL1Q8IXJ9 1541 aa18.87■□□□□ 0.61
IRF3-229ENST00000601373 CCER2I3L3R5 266 aa18.86■□□□□ 0.61
IRF3-229ENST00000601373 BCANQ96GW7 911 aa18.86■□□□□ 0.61
IRF3-229ENST00000601373 LRPPRCP42704 1394 aaKnown RBP18.85■□□□□ 0.61
IRF3-229ENST00000601373 LTKP29376 864 aa18.85■□□□□ 0.61
IRF3-229ENST00000601373 PUS7Q96PZ0 661 aaKnown RBP18.85■□□□□ 0.61
IRF3-229ENST00000601373 NPHP4O75161 1426 aaPredicted RBP18.84■□□□□ 0.61
IRF3-229ENST00000601373 STK26Q9P289 416 aa18.84■□□□□ 0.61
IRF3-229ENST00000601373 NRXN3Q9Y4C0 1643 aa18.84■□□□□ 0.61
IRF3-229ENST00000601373 ARHGEF28Q8N1W1 1705 aaKnown RBP18.83■□□□□ 0.61
IRF3-229ENST00000601373 ABCC11Q96J66 1382 aa18.83■□□□□ 0.61
IRF3-229ENST00000601373 DLC1Q96QB1 1528 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms