RNA–Protein interactions for RNA: ENST00000600995.5

GTPBP3-223, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-223	ENST00000600995	FBXO41	Q8TF61	875 aa		30.17	■■■□□ 2.42
GTPBP3-223	ENST00000600995	RIMS2	Q9UQ26	1411 aa		30.16	■■■□□ 2.42
GTPBP3-223	ENST00000600995	IQSEC2	Q5JU85	1478 aa		30.16	■■■□□ 2.42
GTPBP3-223	ENST00000600995	KIF1B	O60333	1816 aa		30.15	■■■□□ 2.42
GTPBP3-223	ENST00000600995	CLTCL1	P53675	1640 aa		30.14	■■■□□ 2.42
GTPBP3-223	ENST00000600995	CPS1	P31327	1500 aa		30.12	■■■□□ 2.41
GTPBP3-223	ENST00000600995	ILDR1	Q86SU0	546 aa	Predicted RBP	30.12	■■■□□ 2.41
GTPBP3-223	ENST00000600995	PPP1R15A	O75807	674 aa	Predicted RBP	30.09	■■■□□ 2.41
GTPBP3-223	ENST00000600995	PLEKHG1	Q9ULL1	1385 aa		30.09	■■■□□ 2.41
GTPBP3-223	ENST00000600995	FOXD1	Q16676	465 aa		30.06	■■■□□ 2.4
GTPBP3-223	ENST00000600995	ZNF326	Q5BKZ1	582 aa	Known RBP	30.04	■■■□□ 2.4
GTPBP3-223	ENST00000600995	BCAN	Q96GW7	911 aa		30.03	■■■□□ 2.4
GTPBP3-223	ENST00000600995	STRCP1	A6NGW2	1772 aa		30.02	■■■□□ 2.4
GTPBP3-223	ENST00000600995	SLC26A8	Q96RN1	970 aa		30.01	■■■□□ 2.39
GTPBP3-223	ENST00000600995	CCDC144A	A2RUR9	1427 aa		30	■■■□□ 2.39
GTPBP3-223	ENST00000600995	TBX22	Q9Y458	520 aa		29.99	■■■□□ 2.39
GTPBP3-223	ENST00000600995	RPGRIP1L	Q68CZ1	1315 aa		29.97	■■■□□ 2.39
GTPBP3-223	ENST00000600995	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.97	■■■□□ 2.39
GTPBP3-223	ENST00000600995	KCNA6	P17658	529 aa		29.96	■■■□□ 2.39
GTPBP3-223	ENST00000600995	NEXMIF	Q5QGS0	1516 aa		29.96	■■■□□ 2.39
GTPBP3-223	ENST00000600995	DIP2A	Q14689	1571 aa		29.95	■■■□□ 2.39
GTPBP3-223	ENST00000600995	LRRC7	Q96NW7	1537 aa		29.92	■■■□□ 2.38
GTPBP3-223	ENST00000600995	ADAMTS13	Q76LX8	1427 aa		29.92	■■■□□ 2.38
GTPBP3-223	ENST00000600995	CHD2	O14647	1828 aa	Known RBP	29.92	■■■□□ 2.38
GTPBP3-223	ENST00000600995	VGF	O15240	615 aa	Predicted RBP	29.91	■■■□□ 2.38
GTPBP3-223	ENST00000600995	SETBP1	Q9Y6X0	1596 aa		29.9	■■■□□ 2.38
GTPBP3-223	ENST00000600995	PIK3R4	Q99570	1358 aa		29.9	■■■□□ 2.38
GTPBP3-223	ENST00000600995	NWD1	Q149M9	1564 aa		29.89	■■■□□ 2.38
GTPBP3-223	ENST00000600995	SPATA31E1	Q6ZUB1	1445 aa		29.88	■■■□□ 2.37
GTPBP3-223	ENST00000600995	PPL	O60437	1756 aa		29.87	■■■□□ 2.37
GTPBP3-223	ENST00000600995	SENP3	Q9H4L4	574 aa	Predicted RBP	29.87	■■■□□ 2.37
GTPBP3-223	ENST00000600995	NRXN3	Q9Y4C0	1643 aa		29.85	■■■□□ 2.37
GTPBP3-223	ENST00000600995	ANKRD30B	Q9BXX2	1392 aa		29.85	■■■□□ 2.37
GTPBP3-223	ENST00000600995	NKTR	P30414	1462 aa	Known RBP	29.85	■■■□□ 2.37
GTPBP3-223	ENST00000600995	UBAP1L	F5GYI3	381 aa		29.84	■■■□□ 2.37
GTPBP3-223	ENST00000600995	TOM1	O60784	492 aa		29.82	■■■□□ 2.36
GTPBP3-223	ENST00000600995	XIRP1	Q702N8	1843 aa	Known RBP	29.82	■■■□□ 2.36
GTPBP3-223	ENST00000600995	TRIM26	Q12899	539 aa	Predicted RBP	29.81	■■■□□ 2.36
GTPBP3-223	ENST00000600995	RGL3	Q3MIN7	710 aa		29.8	■■■□□ 2.36
GTPBP3-223	ENST00000600995	PROSER2	Q86WR7	435 aa	Predicted RBP	29.8	■■■□□ 2.36
GTPBP3-223	ENST00000600995	IFT172	Q9UG01	1749 aa		29.78	■■■□□ 2.36
GTPBP3-223	ENST00000600995	TMEM94	Q12767	1356 aa		29.76	■■■□□ 2.35
GTPBP3-223	ENST00000600995	NCOA3	Q9Y6Q9	1424 aa		29.73	■■■□□ 2.35
GTPBP3-223	ENST00000600995	AMOTL2	Q9Y2J4	779 aa		29.73	■■■□□ 2.35
GTPBP3-223	ENST00000600995	PTPRU	Q92729	1446 aa		29.71	■■■□□ 2.35
GTPBP3-223	ENST00000600995	MET	P08581	1390 aa		29.71	■■■□□ 2.35
GTPBP3-223	ENST00000600995	ALK	Q9UM73	1620 aa		29.71	■■■□□ 2.35
GTPBP3-223	ENST00000600995	SETD1A	O15047	1707 aa	Known RBP	29.7	■■■□□ 2.34
GTPBP3-223	ENST00000600995	ADGRF5	Q8IZF2	1346 aa		29.69	■■■□□ 2.34
GTPBP3-223	ENST00000600995	XRN1	Q8IZH2	1706 aa	Known RBP	29.68	■■■□□ 2.34
GTPBP3-223	ENST00000600995	STAC3	Q96MF2	364 aa		29.64	■■■□□ 2.34
GTPBP3-223	ENST00000600995	MSH6	P52701	1360 aa		29.64	■■■□□ 2.33
GTPBP3-223	ENST00000600995	MYOM2	P54296	1465 aa		29.63	■■■□□ 2.33
GTPBP3-223	ENST00000600995	PIP4K2B	P78356	416 aa		29.63	■■■□□ 2.33
GTPBP3-223	ENST00000600995	RBM33	Q96EV2	1170 aa	Known RBP	29.63	■■■□□ 2.33
GTPBP3-223	ENST00000600995	PIK3C2G	O75747	1445 aa		29.62	■■■□□ 2.33
GTPBP3-223	ENST00000600995	NRXN1	Q9ULB1	1477 aa		29.61	■■■□□ 2.33
GTPBP3-223	ENST00000600995	SCAF1	Q9H7N4	1312 aa	Known RBP	29.6	■■■□□ 2.33
GTPBP3-223	ENST00000600995	PRAG1	Q86YV5	1406 aa		29.58	■■■□□ 2.33
GTPBP3-223	ENST00000600995	C19orf44	Q9H6X5	657 aa		29.58	■■■□□ 2.33
GTPBP3-223	ENST00000600995	C14orf37	Q86TY3	774 aa		29.56	■■■□□ 2.32
GTPBP3-223	ENST00000600995	C14orf93	Q9H972	538 aa	Known RBP	29.55	■■■□□ 2.32
GTPBP3-223	ENST00000600995	PTCH1	Q13635	1447 aa		29.54	■■■□□ 2.32
GTPBP3-223	ENST00000600995	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.54	■■■□□ 2.32
GTPBP3-223	ENST00000600995	LAMC1	P11047	1609 aa		29.53	■■■□□ 2.32
GTPBP3-223	ENST00000600995	DCAF11	Q8TEB1	546 aa		29.53	■■■□□ 2.32
GTPBP3-223	ENST00000600995	CADPS2	Q86UW7	1296 aa		29.52	■■■□□ 2.32
GTPBP3-223	ENST00000600995	FAM135B	Q49AJ0	1406 aa		29.52	■■■□□ 2.32
GTPBP3-223	ENST00000600995	DHX57	Q6P158	1386 aa	Known RBP	29.5	■■■□□ 2.31
GTPBP3-223	ENST00000600995	DCC	P43146	1447 aa		29.49	■■■□□ 2.31
GTPBP3-223	ENST00000600995	ATF3	P18847	181 aa		29.49	■■■□□ 2.31
GTPBP3-223	ENST00000600995	SLAIN2	Q9P270	581 aa		29.49	■■■□□ 2.31
GTPBP3-223	ENST00000600995	KDM2A	Q9Y2K7	1162 aa		29.48	■■■□□ 2.31
GTPBP3-223	ENST00000600995	LRPPRC	P42704	1394 aa	Known RBP	29.48	■■■□□ 2.31
GTPBP3-223	ENST00000600995	ABCC11	Q96J66	1382 aa		29.47	■■■□□ 2.31
GTPBP3-223	ENST00000600995	ROBO2	Q9HCK4	1378 aa		29.47	■■■□□ 2.31
GTPBP3-223	ENST00000600995	TECPR2	O15040	1411 aa		29.46	■■■□□ 2.31
GTPBP3-223	ENST00000600995	HSPA1L	P34931	641 aa		29.46	■■■□□ 2.31
GTPBP3-223	ENST00000600995	CFAP70	Q5T0N1	1121 aa		29.46	■■■□□ 2.31
GTPBP3-223	ENST00000600995	TMEM132E	Q6IEE7	984 aa		29.45	■■■□□ 2.31
GTPBP3-223	ENST00000600995	KNDC1	Q76NI1	1749 aa		29.45	■■■□□ 2.3
GTPBP3-223	ENST00000600995	ASXL1	Q8IXJ9	1541 aa		29.45	■■■□□ 2.3
GTPBP3-223	ENST00000600995	ADGRL3	Q9HAR2	1447 aa		29.45	■■■□□ 2.3
GTPBP3-223	ENST00000600995	YTHDC2	Q9H6S0	1430 aa	Known RBP	29.43	■■■□□ 2.3
GTPBP3-223	ENST00000600995	ROBO1	Q9Y6N7	1651 aa		29.42	■■■□□ 2.3
GTPBP3-223	ENST00000600995	SIRT1	Q96EB6	747 aa		29.42	■■■□□ 2.3
GTPBP3-223	ENST00000600995	NALCN	Q8IZF0	1738 aa		29.41	■■■□□ 2.3
GTPBP3-223	ENST00000600995	STK26	Q9P289	416 aa		29.4	■■■□□ 2.3
GTPBP3-223	ENST00000600995	SIN3A	Q96ST3	1273 aa		29.37	■■■□□ 2.29
GTPBP3-223	ENST00000600995	ADGRB1	O14514	1584 aa		29.35	■■■□□ 2.29
GTPBP3-223	ENST00000600995	KIAA1210	Q9ULL0	1709 aa		29.32	■■■□□ 2.28
GTPBP3-223	ENST00000600995	MST1R	Q04912	1400 aa		29.32	■■■□□ 2.28
GTPBP3-223	ENST00000600995	DLC1	Q96QB1	1528 aa		29.31	■■■□□ 2.28
GTPBP3-223	ENST00000600995	NEUROD1	Q13562	356 aa		29.31	■■■□□ 2.28
GTPBP3-223	ENST00000600995	WAPL	Q7Z5K2	1190 aa		29.31	■■■□□ 2.28
GTPBP3-223	ENST00000600995	L3MBTL2	Q969R5	705 aa		29.3	■■■□□ 2.28
GTPBP3-223	ENST00000600995	CDC42BPG	Q6DT37	1551 aa		29.26	■■■□□ 2.28
GTPBP3-223	ENST00000600995	BRINP3	Q76B58	766 aa		29.26	■■■□□ 2.27
GTPBP3-223	ENST00000600995	PLEKHH1	Q9ULM0	1364 aa		29.26	■■■□□ 2.27
GTPBP3-223	ENST00000600995	PCGF6	Q9BYE7	350 aa		29.25	■■■□□ 2.27

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms