RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 HDGFP51858 240 aaKnown RBP17.54■□□□□ 0.4
SOX2-OT-233ENST00000600778 PPP1R15AO75807 674 aaPredicted RBP17.53■□□□□ 0.4
SOX2-OT-233ENST00000600778 HSPA1LP34931 641 aa17.53■□□□□ 0.4
SOX2-OT-233ENST00000600778 TMEM131LA2VDJ0 1609 aa17.53■□□□□ 0.4
SOX2-OT-233ENST00000600778 RIMS2Q9UQ26 1411 aa17.53■□□□□ 0.4
SOX2-OT-233ENST00000600778 ZFYVE9O95405 1425 aa17.52■□□□□ 0.4
SOX2-OT-233ENST00000600778 KCNA6P17658 529 aa17.51■□□□□ 0.39
SOX2-OT-233ENST00000600778 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
SOX2-OT-233ENST00000600778 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
SOX2-OT-233ENST00000600778 NAIPQ13075 1403 aa17.5■□□□□ 0.39
SOX2-OT-233ENST00000600778 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.5■□□□□ 0.39
SOX2-OT-233ENST00000600778 PLEKHG1Q9ULL1 1385 aa17.49■□□□□ 0.39
SOX2-OT-233ENST00000600778 PROSER2Q86WR7 435 aaPredicted RBP17.48■□□□□ 0.39
SOX2-OT-233ENST00000600778 RBM33Q96EV2 1170 aaKnown RBP17.48■□□□□ 0.39
SOX2-OT-233ENST00000600778 XIRP1Q702N8 1843 aaKnown RBP17.47■□□□□ 0.39
SOX2-OT-233ENST00000600778 TMEM94Q12767 1356 aa17.46■□□□□ 0.39
SOX2-OT-233ENST00000600778 TRIM52Q96A61 297 aa17.46■□□□□ 0.39
SOX2-OT-233ENST00000600778 SPHKAPQ2M3C7 1700 aa17.44■□□□□ 0.38
SOX2-OT-233ENST00000600778 ILDR2Q71H61 639 aa17.44■□□□□ 0.38
SOX2-OT-233ENST00000600778 TBX22Q9Y458 520 aa17.44■□□□□ 0.38
SOX2-OT-233ENST00000600778 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
SOX2-OT-233ENST00000600778 ZNF326Q5BKZ1 582 aaKnown RBP17.42■□□□□ 0.38
SOX2-OT-233ENST00000600778 NWD1Q149M9 1564 aa17.41■□□□□ 0.38
SOX2-OT-233ENST00000600778 NKTRP30414 1462 aaKnown RBP17.4■□□□□ 0.38
SOX2-OT-233ENST00000600778 CHD2O14647 1828 aaKnown RBP17.4■□□□□ 0.38
SOX2-OT-233ENST00000600778 ADAMTS13Q76LX8 1427 aa17.39■□□□□ 0.38
SOX2-OT-233ENST00000600778 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.37
SOX2-OT-233ENST00000600778 CLTCL1P53675 1640 aa17.37■□□□□ 0.37
SOX2-OT-233ENST00000600778 TRPM2O94759 1503 aa17.37■□□□□ 0.37
SOX2-OT-233ENST00000600778 MSH6P52701 1360 aa17.36■□□□□ 0.37
SOX2-OT-233ENST00000600778 DIP2AQ14689 1571 aa17.36■□□□□ 0.37
SOX2-OT-233ENST00000600778 FAM135BQ49AJ0 1406 aa17.35■□□□□ 0.37
SOX2-OT-233ENST00000600778 PIK3R4Q99570 1358 aa17.34■□□□□ 0.37
SOX2-OT-233ENST00000600778 AMOTL2Q9Y2J4 779 aa17.34■□□□□ 0.37
SOX2-OT-233ENST00000600778 MED1Q15648 1581 aaPredicted RBP17.33■□□□□ 0.37
SOX2-OT-233ENST00000600778 C14orf37Q86TY3 774 aa17.33■□□□□ 0.36
SOX2-OT-233ENST00000600778 PTPRUQ92729 1446 aa17.32■□□□□ 0.36
SOX2-OT-233ENST00000600778 FOXD1Q16676 465 aa17.32■□□□□ 0.36
SOX2-OT-233ENST00000600778 KIF1BO60333 1816 aa17.32■□□□□ 0.36
SOX2-OT-233ENST00000600778 SLAIN2Q9P270 581 aa17.31■□□□□ 0.36
SOX2-OT-233ENST00000600778 NCOA3Q9Y6Q9 1424 aa17.3■□□□□ 0.36
SOX2-OT-233ENST00000600778 ROBO1Q9Y6N7 1651 aa17.3■□□□□ 0.36
SOX2-OT-233ENST00000600778 NRXN3Q9Y4C0 1643 aa17.3■□□□□ 0.36
SOX2-OT-233ENST00000600778 SETBP1Q9Y6X0 1596 aa17.3■□□□□ 0.36
SOX2-OT-233ENST00000600778 NEXMIFQ5QGS0 1516 aa17.3■□□□□ 0.36
SOX2-OT-233ENST00000600778 METP08581 1390 aa17.28■□□□□ 0.36
SOX2-OT-233ENST00000600778 SOCS7O14512 581 aa17.27■□□□□ 0.36
SOX2-OT-233ENST00000600778 MPHOSPH9Q99550 1183 aa17.27■□□□□ 0.36
SOX2-OT-233ENST00000600778 C19orf44Q9H6X5 657 aa17.27■□□□□ 0.36
SOX2-OT-233ENST00000600778 VGFO15240 615 aaPredicted RBP17.26■□□□□ 0.35
SOX2-OT-233ENST00000600778 ATF3P18847 181 aa17.26■□□□□ 0.35
SOX2-OT-233ENST00000600778 CADPS2Q86UW7 1296 aa17.25■□□□□ 0.35
SOX2-OT-233ENST00000600778 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.24■□□□□ 0.35
SOX2-OT-233ENST00000600778 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
SOX2-OT-233ENST00000600778 SETD5Q9C0A6 1442 aa17.22■□□□□ 0.35
SOX2-OT-233ENST00000600778 XRN1Q8IZH2 1706 aaKnown RBP17.22■□□□□ 0.35
SOX2-OT-233ENST00000600778 CCDC144AA2RUR9 1427 aa17.21■□□□□ 0.35
SOX2-OT-233ENST00000600778 RGL3Q3MIN7 710 aa17.21■□□□□ 0.35
SOX2-OT-233ENST00000600778 PHLPP1O60346 1717 aa17.2■□□□□ 0.34
SOX2-OT-233ENST00000600778 ACIN1Q9UKV3 1341 aaKnown RBP17.19■□□□□ 0.34
SOX2-OT-233ENST00000600778 PPLO60437 1756 aa17.18■□□□□ 0.34
SOX2-OT-233ENST00000600778 RAB3GAP2Q9H2M9 1393 aa17.16■□□□□ 0.34
SOX2-OT-233ENST00000600778 DCCP43146 1447 aa17.16■□□□□ 0.34
SOX2-OT-233ENST00000600778 BRINP3Q76B58 766 aa17.16■□□□□ 0.34
SOX2-OT-233ENST00000600778 ADGRF5Q8IZF2 1346 aa17.16■□□□□ 0.34
SOX2-OT-233ENST00000600778 RGS17Q9UGC6 210 aaPredicted RBP17.15■□□□□ 0.34
SOX2-OT-233ENST00000600778 SETD1AO15047 1707 aaKnown RBP17.15■□□□□ 0.34
SOX2-OT-233ENST00000600778 JCADQ9P266 1359 aa17.15■□□□□ 0.34
SOX2-OT-233ENST00000600778 SPATA31E1Q6ZUB1 1445 aa17.14■□□□□ 0.33
SOX2-OT-233ENST00000600778 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
SOX2-OT-233ENST00000600778 COL16A1Q07092 1604 aaPredicted RBP17.13■□□□□ 0.33
SOX2-OT-233ENST00000600778 ROBO2Q9HCK4 1378 aa17.13■□□□□ 0.33
SOX2-OT-233ENST00000600778 MST1RQ04912 1400 aa17.13■□□□□ 0.33
SOX2-OT-233ENST00000600778 PTCH1Q13635 1447 aa17.12■□□□□ 0.33
SOX2-OT-233ENST00000600778 AHDC1Q5TGY3 1603 aaPredicted RBP17.11■□□□□ 0.33
SOX2-OT-233ENST00000600778 NALCNQ8IZF0 1738 aa17.11■□□□□ 0.33
SOX2-OT-233ENST00000600778 ANKRD30BQ9BXX2 1392 aa17.11■□□□□ 0.33
SOX2-OT-233ENST00000600778 STK26Q9P289 416 aa17.09■□□□□ 0.33
SOX2-OT-233ENST00000600778 ASXL1Q8IXJ9 1541 aa17.09■□□□□ 0.33
SOX2-OT-233ENST00000600778 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
SOX2-OT-233ENST00000600778 DDX17Q92841 729 aaKnown RBP17.08■□□□□ 0.32
SOX2-OT-233ENST00000600778 TMEM132EQ6IEE7 984 aa17.07■□□□□ 0.32
SOX2-OT-233ENST00000600778 POTEAQ6S8J7 498 aa17.07■□□□□ 0.32
SOX2-OT-233ENST00000600778 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
SOX2-OT-233ENST00000600778 SPATA31A6Q5VVP1 1343 aa17.06■□□□□ 0.32
SOX2-OT-233ENST00000600778 C1orf167Q5SNV9 1468 aa17.05■□□□□ 0.32
SOX2-OT-233ENST00000600778 MEX3CQ5U5Q3 659 aaKnown RBP17.05■□□□□ 0.32
SOX2-OT-233ENST00000600778 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
SOX2-OT-233ENST00000600778 WAPLQ7Z5K2 1190 aa17.04■□□□□ 0.32
SOX2-OT-233ENST00000600778 SHPRHQ149N8 1683 aa17.04■□□□□ 0.32
SOX2-OT-233ENST00000600778 LRPPRCP42704 1394 aaKnown RBP17.03■□□□□ 0.32
SOX2-OT-233ENST00000600778 NHSL1Q5SYE7 1610 aa17.03■□□□□ 0.32
SOX2-OT-233ENST00000600778 NUTM2BA6NNL0 878 aaPredicted RBP17.03■□□□□ 0.32
SOX2-OT-233ENST00000600778 NUTM2EB1AL46 878 aaPredicted RBP17.03■□□□□ 0.32
SOX2-OT-233ENST00000600778 HRCP23327 699 aa17.03■□□□□ 0.32
SOX2-OT-233ENST00000600778 NUTM2AQ8IVF1 878 aaPredicted RBP17.03■□□□□ 0.32
SOX2-OT-233ENST00000600778 LRRC59Q96AG4 307 aaKnown RBP17.03■□□□□ 0.32
SOX2-OT-233ENST00000600778 ORAI2Q96SN7 254 aa17.03■□□□□ 0.32
SOX2-OT-233ENST00000600778 LRP6O75581 1613 aa17.03■□□□□ 0.32
SOX2-OT-233ENST00000600778 CFAP70Q5T0N1 1121 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms