RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 HDGFP51858 240 aaKnown RBP26.57■■□□□ 1.84
SMG9-210ENST00000600097 NWD1Q149M9 1564 aa26.53■■□□□ 1.84
SMG9-210ENST00000600097 ZFYVE9O95405 1425 aa26.52■■□□□ 1.84
SMG9-210ENST00000600097 PLEKHG1Q9ULL1 1385 aa26.52■■□□□ 1.84
SMG9-210ENST00000600097 PPP1R15AO75807 674 aaPredicted RBP26.51■■□□□ 1.83
SMG9-210ENST00000600097 RBM33Q96EV2 1170 aaKnown RBP26.51■■□□□ 1.83
SMG9-210ENST00000600097 MSH6P52701 1360 aa26.5■■□□□ 1.83
SMG9-210ENST00000600097 RIMS2Q9UQ26 1411 aa26.49■■□□□ 1.83
SMG9-210ENST00000600097 RGS17Q9UGC6 210 aaPredicted RBP26.48■■□□□ 1.83
SMG9-210ENST00000600097 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.47■■□□□ 1.83
SMG9-210ENST00000600097 ROCK1Q13464 1354 aa26.46■■□□□ 1.83
SMG9-210ENST00000600097 TBX22Q9Y458 520 aa26.46■■□□□ 1.83
SMG9-210ENST00000600097 ROBO1Q9Y6N7 1651 aa26.46■■□□□ 1.83
SMG9-210ENST00000600097 UNC13BO14795 1591 aa26.46■■□□□ 1.83
SMG9-210ENST00000600097 TMEM131LA2VDJ0 1609 aa26.45■■□□□ 1.82
SMG9-210ENST00000600097 GCC2Q8IWJ2 1684 aa26.44■■□□□ 1.82
SMG9-210ENST00000600097 SLAIN2Q9P270 581 aa26.44■■□□□ 1.82
SMG9-210ENST00000600097 CHGAP10645 457 aaKnown RBP26.43■■□□□ 1.82
SMG9-210ENST00000600097 NCOA3Q9Y6Q9 1424 aa26.41■■□□□ 1.82
SMG9-210ENST00000600097 MYO5BQ9ULV0 1848 aa26.39■■□□□ 1.82
SMG9-210ENST00000600097 CHD2O14647 1828 aaKnown RBP26.39■■□□□ 1.81
SMG9-210ENST00000600097 E9PCH4 1651 aa26.37■■□□□ 1.81
SMG9-210ENST00000600097 IQGAP3Q86VI3 1631 aa26.36■■□□□ 1.81
SMG9-210ENST00000600097 PIK3R4Q99570 1358 aa26.36■■□□□ 1.81
SMG9-210ENST00000600097 NUP155O75694 1391 aa26.35■■□□□ 1.81
SMG9-210ENST00000600097 ADAMTS13Q76LX8 1427 aa26.35■■□□□ 1.81
SMG9-210ENST00000600097 DIP2AQ14689 1571 aa26.34■■□□□ 1.81
SMG9-210ENST00000600097 C14orf37Q86TY3 774 aa26.34■■□□□ 1.81
SMG9-210ENST00000600097 JCADQ9P266 1359 aa26.33■■□□□ 1.81
SMG9-210ENST00000600097 NUTM2DQ5VT03 806 aaPredicted RBP26.33■■□□□ 1.81
SMG9-210ENST00000600097 POTEAQ6S8J7 498 aa26.33■■□□□ 1.81
SMG9-210ENST00000600097 CADPS2Q86UW7 1296 aa26.31■■□□□ 1.8
SMG9-210ENST00000600097 C19orf44Q9H6X5 657 aa26.31■■□□□ 1.8
SMG9-210ENST00000600097 PHLPP1O60346 1717 aa26.3■■□□□ 1.8
SMG9-210ENST00000600097 ITGAEP38570 1179 aa26.29■■□□□ 1.8
SMG9-210ENST00000600097 ATF3P18847 181 aa26.27■■□□□ 1.8
SMG9-210ENST00000600097 TRPM2O94759 1503 aa26.26■■□□□ 1.79
SMG9-210ENST00000600097 AMOTL2Q9Y2J4 779 aa26.25■■□□□ 1.79
SMG9-210ENST00000600097 COL16A1Q07092 1604 aaPredicted RBP26.22■■□□□ 1.79
SMG9-210ENST00000600097 SPATA31A6Q5VVP1 1343 aa26.22■■□□□ 1.79
SMG9-210ENST00000600097 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.2■■□□□ 1.79
SMG9-210ENST00000600097 PTPRUQ92729 1446 aa26.2■■□□□ 1.78
SMG9-210ENST00000600097 AHDC1Q5TGY3 1603 aaPredicted RBP26.17■■□□□ 1.78
SMG9-210ENST00000600097 DCCP43146 1447 aa26.17■■□□□ 1.78
SMG9-210ENST00000600097 ZNF326Q5BKZ1 582 aaKnown RBP26.17■■□□□ 1.78
SMG9-210ENST00000600097 PPARGC1BQ86YN6 1023 aaKnown RBP26.15■■□□□ 1.78
SMG9-210ENST00000600097 SETBP1Q9Y6X0 1596 aa26.15■■□□□ 1.78
SMG9-210ENST00000600097 MEX3CQ5U5Q3 659 aaKnown RBP26.14■■□□□ 1.78
SMG9-210ENST00000600097 BRINP3Q76B58 766 aa26.14■■□□□ 1.78
SMG9-210ENST00000600097 SPHKAPQ2M3C7 1700 aa26.14■■□□□ 1.77
SMG9-210ENST00000600097 ZNF772Q68DY9 489 aaPredicted RBP26.12■■□□□ 1.77
SMG9-210ENST00000600097 LRP6O75581 1613 aa26.11■■□□□ 1.77
SMG9-210ENST00000600097 NRXN3Q9Y4C0 1643 aa26.11■■□□□ 1.77
SMG9-210ENST00000600097 XRN1Q8IZH2 1706 aaKnown RBP26.1■■□□□ 1.77
SMG9-210ENST00000600097 METP08581 1390 aa26.09■■□□□ 1.77
SMG9-210ENST00000600097 SHPRHQ149N8 1683 aa26.08■■□□□ 1.77
SMG9-210ENST00000600097 MST1RQ04912 1400 aa26.05■■□□□ 1.76
SMG9-210ENST00000600097 RRBP1Q9P2E9 1410 aaKnown RBP26.05■■□□□ 1.76
SMG9-210ENST00000600097 ASXL1Q8IXJ9 1541 aa26.04■■□□□ 1.76
SMG9-210ENST00000600097 NAIPQ13075 1403 aa26.03■■□□□ 1.76
SMG9-210ENST00000600097 SETD5Q9C0A6 1442 aa26.03■■□□□ 1.76
SMG9-210ENST00000600097 ADGRL3Q9HAR2 1447 aa26.03■■□□□ 1.76
SMG9-210ENST00000600097 NEXMIFQ5QGS0 1516 aa26.03■■□□□ 1.76
SMG9-210ENST00000600097 CLTCL1P53675 1640 aa26.03■■□□□ 1.76
SMG9-210ENST00000600097 LRRC59Q96AG4 307 aaKnown RBP26.01■■□□□ 1.75
SMG9-210ENST00000600097 NUTM2BA6NNL0 878 aaPredicted RBP26■■□□□ 1.75
SMG9-210ENST00000600097 NUTM2EB1AL46 878 aaPredicted RBP26■■□□□ 1.75
SMG9-210ENST00000600097 NUTM2AQ8IVF1 878 aaPredicted RBP26■■□□□ 1.75
SMG9-210ENST00000600097 SETD1AO15047 1707 aaKnown RBP26■■□□□ 1.75
SMG9-210ENST00000600097 VGFO15240 615 aaPredicted RBP25.99■■□□□ 1.75
SMG9-210ENST00000600097 RXRBP28702 533 aa25.97■■□□□ 1.75
SMG9-210ENST00000600097 TRIM52Q96A61 297 aa25.96■■□□□ 1.75
SMG9-210ENST00000600097 NHSL1Q5SYE7 1610 aa25.96■■□□□ 1.75
SMG9-210ENST00000600097 KIF1BO60333 1816 aa25.95■■□□□ 1.74
SMG9-210ENST00000600097 RPGRIP1LQ68CZ1 1315 aa25.93■■□□□ 1.74
SMG9-210ENST00000600097 PTCH1Q13635 1447 aa25.93■■□□□ 1.74
SMG9-210ENST00000600097 AFF2P51816 1311 aa25.92■■□□□ 1.74
SMG9-210ENST00000600097 HFM1A2PYH4 1435 aa25.92■■□□□ 1.74
SMG9-210ENST00000600097 UPF1Q92900 1129 aaKnown RBP eCLIP25.91■■□□□ 1.743e-10■■■■■ 32.2
SMG9-210ENST00000600097 NALCNQ8IZF0 1738 aa25.91■■□□□ 1.74
SMG9-210ENST00000600097 CDK12Q9NYV4 1490 aaPredicted RBP25.91■■□□□ 1.74
SMG9-210ENST00000600097 SLC4A1APQ9BWU0 796 aaKnown RBP25.9■■□□□ 1.74
SMG9-210ENST00000600097 PNPLA6Q8IY17 1366 aa25.9■■□□□ 1.74
SMG9-210ENST00000600097 C1orf167Q5SNV9 1468 aa25.9■■□□□ 1.74
SMG9-210ENST00000600097 DDX17Q92841 729 aaKnown RBP25.89■■□□□ 1.74
SMG9-210ENST00000600097 PRAG1Q86YV5 1406 aa25.88■■□□□ 1.73
SMG9-210ENST00000600097 ROBO2Q9HCK4 1378 aa25.87■■□□□ 1.73
SMG9-210ENST00000600097 C8orf37Q96NL8 207 aa25.86■■□□□ 1.73
SMG9-210ENST00000600097 ORAI2Q96SN7 254 aa25.82■■□□□ 1.72
SMG9-210ENST00000600097 QTRT2Q9H974 415 aaKnown RBP25.82■■□□□ 1.72
SMG9-210ENST00000600097 SOS2Q07890 1332 aaPredicted RBP25.82■■□□□ 1.72
SMG9-210ENST00000600097 RBM6P78332 1123 aaKnown RBP25.81■■□□□ 1.72
SMG9-210ENST00000600097 LAMC1P11047 1609 aa25.81■■□□□ 1.72
SMG9-210ENST00000600097 NGLY1Q96IV0 654 aa25.79■■□□□ 1.72
SMG9-210ENST00000600097 ADAMTS2O95450 1211 aa25.78■■□□□ 1.72
SMG9-210ENST00000600097 PPLO60437 1756 aa25.76■■□□□ 1.71
SMG9-210ENST00000600097 CCDC144AA2RUR9 1427 aa25.74■■□□□ 1.71
SMG9-210ENST00000600097 RGS12O14924 1447 aa25.73■■□□□ 1.71
SMG9-210ENST00000600097 NPHP3Q7Z494 1330 aa25.72■■□□□ 1.71
SMG9-210ENST00000600097 FOXD1Q16676 465 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms