RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 CDC42BPBQ9Y5S2 1711 aa20.54■□□□□ 0.88
ARHGEF1-219ENST00000599846 MORC1Q86VD1 984 aa20.54■□□□□ 0.88
ARHGEF1-219ENST00000599846 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
ARHGEF1-219ENST00000599846 SLFN5Q08AF3 891 aa20.52■□□□□ 0.88
ARHGEF1-219ENST00000599846 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
ARHGEF1-219ENST00000599846 EIF3AQ14152 1382 aaKnown RBP20.52■□□□□ 0.88
ARHGEF1-219ENST00000599846 BCL2L13Q9BXK5 485 aa20.52■□□□□ 0.88
ARHGEF1-219ENST00000599846 COG6Q9Y2V7 657 aa20.51■□□□□ 0.87
ARHGEF1-219ENST00000599846 BLMP54132 1417 aaPredicted RBP20.51■□□□□ 0.87
ARHGEF1-219ENST00000599846 ADGRF5Q8IZF2 1346 aa20.51■□□□□ 0.87
ARHGEF1-219ENST00000599846 FAM161AQ3B820 660 aa20.51■□□□□ 0.87
ARHGEF1-219ENST00000599846 PREX2Q70Z35 1606 aa20.5■□□□□ 0.87
ARHGEF1-219ENST00000599846 DUOX2Q9NRD8 1548 aa20.5■□□□□ 0.87
ARHGEF1-219ENST00000599846 TMEM132EQ6IEE7 984 aa20.49■□□□□ 0.87
ARHGEF1-219ENST00000599846 PANK1Q8TE04 598 aa20.49■□□□□ 0.87
ARHGEF1-219ENST00000599846 PLCH2O75038 1416 aa20.49■□□□□ 0.87
ARHGEF1-219ENST00000599846 SCAPERQ9BY12 1400 aa20.49■□□□□ 0.87
ARHGEF1-219ENST00000599846 CLUAP1Q96AJ1 413 aa20.48■□□□□ 0.87
ARHGEF1-219ENST00000599846 E9PSI1 815 aa20.47■□□□□ 0.87
ARHGEF1-219ENST00000599846 SLC12A5Q9H2X9 1139 aa20.47■□□□□ 0.87
ARHGEF1-219ENST00000599846 DMRT2Q9Y5R5 561 aa20.47■□□□□ 0.87
ARHGEF1-219ENST00000599846 PRDM15P57071 1507 aaPredicted RBP20.46■□□□□ 0.87
ARHGEF1-219ENST00000599846 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
ARHGEF1-219ENST00000599846 CENPJQ9HC77 1338 aaPredicted RBP20.46■□□□□ 0.87
ARHGEF1-219ENST00000599846 CARD14Q9BXL6 1004 aa20.45■□□□□ 0.86
ARHGEF1-219ENST00000599846 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
ARHGEF1-219ENST00000599846 WDR7Q9Y4E6 1490 aa20.44■□□□□ 0.86
ARHGEF1-219ENST00000599846 IL27Q8NEV9 243 aa20.43■□□□□ 0.86
ARHGEF1-219ENST00000599846 ZMYM4Q5VZL5 1548 aa20.43■□□□□ 0.86
ARHGEF1-219ENST00000599846 EIF2AK4Q9P2K8 1649 aaKnown RBP20.42■□□□□ 0.86
ARHGEF1-219ENST00000599846 NFKBIBQ15653 356 aa20.42■□□□□ 0.86
ARHGEF1-219ENST00000599846 E9PCH4 1651 aa20.41■□□□□ 0.86
ARHGEF1-219ENST00000599846 USP35Q9P2H5 1018 aa20.41■□□□□ 0.86
ARHGEF1-219ENST00000599846 KDM2BQ8NHM5 1336 aa20.4■□□□□ 0.86
ARHGEF1-219ENST00000599846 NPM1P06748 294 aaKnown RBP eCLIP20.4■□□□□ 0.86
ARHGEF1-219ENST00000599846 STAC3Q96MF2 364 aa20.4■□□□□ 0.86
ARHGEF1-219ENST00000599846 U2AF1L5P0DN76 240 aaPredicted RBP20.4■□□□□ 0.86
ARHGEF1-219ENST00000599846 U2AF1Q01081 240 aaKnown RBP eCLIP20.4■□□□□ 0.86
ARHGEF1-219ENST00000599846 STK26Q9P289 416 aa20.4■□□□□ 0.86
ARHGEF1-219ENST00000599846 MAST1Q9Y2H9 1570 aa20.4■□□□□ 0.86
ARHGEF1-219ENST00000599846 ABCC2Q92887 1545 aa20.39■□□□□ 0.86
ARHGEF1-219ENST00000599846 SLC24A1O60721 1099 aa20.39■□□□□ 0.86
ARHGEF1-219ENST00000599846 IGHDP01880 384 aa20.39■□□□□ 0.85
ARHGEF1-219ENST00000599846 U2SURPO15042 1029 aaKnown RBP20.38■□□□□ 0.85
ARHGEF1-219ENST00000599846 ASXL1Q8IXJ9 1541 aa20.38■□□□□ 0.85
ARHGEF1-219ENST00000599846 WWC1Q8IX03 1113 aa20.38■□□□□ 0.85
ARHGEF1-219ENST00000599846 CFAP53Q96M91 514 aa20.38■□□□□ 0.85
ARHGEF1-219ENST00000599846 TCP11L2Q8N4U5 519 aa20.38■□□□□ 0.85
ARHGEF1-219ENST00000599846 UNC13BO14795 1591 aa20.37■□□□□ 0.85
ARHGEF1-219ENST00000599846 MTHFSP49914 203 aa20.37■□□□□ 0.85
ARHGEF1-219ENST00000599846 C8orf34Q49A92 452 aa20.37■□□□□ 0.85
ARHGEF1-219ENST00000599846 ZNF521Q96K83 1311 aa20.36■□□□□ 0.85
ARHGEF1-219ENST00000599846 SLKQ9H2G2 1235 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF1-219ENST00000599846 MYO5CQ9NQX4 1742 aa20.36■□□□□ 0.85
ARHGEF1-219ENST00000599846 IQGAP3Q86VI3 1631 aa20.36■□□□□ 0.85
ARHGEF1-219ENST00000599846 ATP10AO60312 1499 aa20.35■□□□□ 0.85
ARHGEF1-219ENST00000599846 ARXQ96QS3 562 aa20.34■□□□□ 0.85
ARHGEF1-219ENST00000599846 CGNL1Q0VF96 1302 aa20.34■□□□□ 0.85
ARHGEF1-219ENST00000599846 NKTRP30414 1462 aaKnown RBP20.34■□□□□ 0.85
ARHGEF1-219ENST00000599846 FTSJ3Q8IY81 847 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-219ENST00000599846 UPF2Q9HAU5 1272 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-219ENST00000599846 FRAT2O75474 233 aaPredicted RBP20.32■□□□□ 0.84
ARHGEF1-219ENST00000599846 GSE1Q14687 1217 aa20.32■□□□□ 0.84
ARHGEF1-219ENST00000599846 SPRYD3Q8NCJ5 442 aa20.32■□□□□ 0.84
ARHGEF1-219ENST00000599846 RUNDC1Q96C34 613 aa20.32■□□□□ 0.84
ARHGEF1-219ENST00000599846 TNNQ9UQP3 1299 aa20.32■□□□□ 0.84
ARHGEF1-219ENST00000599846 CHD1O14646 1710 aa20.32■□□□□ 0.84
ARHGEF1-219ENST00000599846 INSRP06213 1382 aa20.31■□□□□ 0.84
ARHGEF1-219ENST00000599846 SRPK2P78362 688 aaKnown RBP20.31■□□□□ 0.84
ARHGEF1-219ENST00000599846 PIK3C2GO75747 1445 aa20.3■□□□□ 0.84
ARHGEF1-219ENST00000599846 NSD3Q9BZ95 1437 aa20.3■□□□□ 0.84
ARHGEF1-219ENST00000599846 CABP2Q9NPB3 220 aa20.3■□□□□ 0.84
ARHGEF1-219ENST00000599846 UGGT1Q9NYU2 1555 aa20.3■□□□□ 0.84
ARHGEF1-219ENST00000599846 FANCAO15360 1455 aa20.3■□□□□ 0.84
ARHGEF1-219ENST00000599846 PLXNC1O60486 1568 aa20.29■□□□□ 0.84
ARHGEF1-219ENST00000599846 PDE3AQ14432 1141 aa20.28■□□□□ 0.84
ARHGEF1-219ENST00000599846 BRPF3Q9ULD4 1205 aa20.28■□□□□ 0.84
ARHGEF1-219ENST00000599846 NOS1P29475 1434 aa20.27■□□□□ 0.84
ARHGEF1-219ENST00000599846 BECN1Q14457 450 aa20.26■□□□□ 0.83
ARHGEF1-219ENST00000599846 TRMT2AQ8IZ69 625 aaKnown RBP20.26■□□□□ 0.83
ARHGEF1-219ENST00000599846 ADGRL1O94910 1474 aa20.26■□□□□ 0.83
ARHGEF1-219ENST00000599846 SEC24BO95487 1268 aa20.26■□□□□ 0.83
ARHGEF1-219ENST00000599846 TSR2Q969E8 191 aaKnown RBP20.25■□□□□ 0.83
ARHGEF1-219ENST00000599846 ABCC1P33527 1531 aa20.25■□□□□ 0.83
ARHGEF1-219ENST00000599846 RARSP54136 660 aaKnown RBP20.25■□□□□ 0.83
ARHGEF1-219ENST00000599846 GGNBP2Q9H3C7 697 aa20.25■□□□□ 0.83
ARHGEF1-219ENST00000599846 RLBP1P12271 317 aa20.23■□□□□ 0.83
ARHGEF1-219ENST00000599846 PMFBP1Q8TBY8 1022 aa20.23■□□□□ 0.83
ARHGEF1-219ENST00000599846 SMC4Q9NTJ3 1288 aa20.23■□□□□ 0.83
ARHGEF1-219ENST00000599846 MYH16Q9H6N6 1097 aa20.23■□□□□ 0.83
ARHGEF1-219ENST00000599846 CFAP65Q6ZU64 1925 aaKnown RBP20.23■□□□□ 0.83
ARHGEF1-219ENST00000599846 MADDQ8WXG6 1647 aa20.22■□□□□ 0.83
ARHGEF1-219ENST00000599846 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
ARHGEF1-219ENST00000599846 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
ARHGEF1-219ENST00000599846 POGKQ9P215 609 aa20.22■□□□□ 0.83
ARHGEF1-219ENST00000599846 STAG3Q9UJ98 1225 aa20.21■□□□□ 0.83
ARHGEF1-219ENST00000599846 PCDHB15Q9Y5E8 787 aa20.21■□□□□ 0.83
ARHGEF1-219ENST00000599846 RTEL1-TNFRSF6BF6WH68 1400 aa20.21■□□□□ 0.83
ARHGEF1-219ENST00000599846 LAMC1P11047 1609 aa20.21■□□□□ 0.83
ARHGEF1-219ENST00000599846 RWDD1Q9H446 243 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms