RNA–Protein interactions for RNA: ENST00000599839.5

CALM3-212, Transcript of calmodulin 3, humanhuman

TSL 1 (best) BASIC

Gene CALM3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-212ENST00000599839 PCGF6Q9BYE7 350 aa23.23■■□□□ 1.31
CALM3-212ENST00000599839 IFT172Q9UG01 1749 aa23.22■■□□□ 1.31
CALM3-212ENST00000599839 PPLO60437 1756 aa23.22■■□□□ 1.31
CALM3-212ENST00000599839 TXNDC2Q86VQ3 553 aa23.21■■□□□ 1.31
CALM3-212ENST00000599839 SPATA31E1Q6ZUB1 1445 aa23.2■■□□□ 1.3
CALM3-212ENST00000599839 NUTM2DQ5VT03 806 aaPredicted RBP23.19■■□□□ 1.3
CALM3-212ENST00000599839 DHX57Q6P158 1386 aaKnown RBP23.19■■□□□ 1.3
CALM3-212ENST00000599839 NRXN3Q9Y4C0 1643 aa23.17■■□□□ 1.3
CALM3-212ENST00000599839 DMRT2Q9Y5R5 561 aa23.16■■□□□ 1.3
CALM3-212ENST00000599839 STRCP1A6NGW2 1772 aa23.16■■□□□ 1.3
CALM3-212ENST00000599839 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
CALM3-212ENST00000599839 EID1Q9Y6B2 187 aa23.15■■□□□ 1.3
CALM3-212ENST00000599839 ZNF326Q5BKZ1 582 aaKnown RBP23.14■■□□□ 1.3
CALM3-212ENST00000599839 LTBP4Q8N2S1 1624 aa23.12■■□□□ 1.29
CALM3-212ENST00000599839 PLEKHG1Q9ULL1 1385 aa23.12■■□□□ 1.29
CALM3-212ENST00000599839 ZNF335Q9H4Z2 1342 aaPredicted RBP23.1■■□□□ 1.29
CALM3-212ENST00000599839 SETBP1Q9Y6X0 1596 aa23.1■■□□□ 1.29
CALM3-212ENST00000599839 PPP1R15AO75807 674 aaPredicted RBP23.09■■□□□ 1.29
CALM3-212ENST00000599839 SETD1AO15047 1707 aaKnown RBP23.08■■□□□ 1.29
CALM3-212ENST00000599839 ADAMTS13Q76LX8 1427 aa23.08■■□□□ 1.29
CALM3-212ENST00000599839 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
CALM3-212ENST00000599839 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.08■■□□□ 1.29
CALM3-212ENST00000599839 DIP2AQ14689 1571 aa23.05■■□□□ 1.28
CALM3-212ENST00000599839 SLC26A8Q96RN1 970 aa23.05■■□□□ 1.28
CALM3-212ENST00000599839 CHD2O14647 1828 aaKnown RBP23.04■■□□□ 1.28
CALM3-212ENST00000599839 HDGFP51858 240 aaKnown RBP23.03■■□□□ 1.28
CALM3-212ENST00000599839 RPGRIP1LQ68CZ1 1315 aa23.03■■□□□ 1.28
CALM3-212ENST00000599839 NWD1Q149M9 1564 aa23.02■■□□□ 1.28
CALM3-212ENST00000599839 BCANQ96GW7 911 aa23.01■■□□□ 1.27
CALM3-212ENST00000599839 MYOM2P54296 1465 aa23■■□□□ 1.27
CALM3-212ENST00000599839 ADGRF5Q8IZF2 1346 aa23■■□□□ 1.27
CALM3-212ENST00000599839 SIN3AQ96ST3 1273 aa23■■□□□ 1.27
CALM3-212ENST00000599839 XIRP1Q702N8 1843 aaKnown RBP22.99■■□□□ 1.27
CALM3-212ENST00000599839 ALKQ9UM73 1620 aa22.98■■□□□ 1.27
CALM3-212ENST00000599839 NRXN1Q9ULB1 1477 aa22.98■■□□□ 1.27
CALM3-212ENST00000599839 CPS1P31327 1500 aa22.97■■□□□ 1.27
CALM3-212ENST00000599839 PIK3C2GO75747 1445 aa22.97■■□□□ 1.27
CALM3-212ENST00000599839 XRN1Q8IZH2 1706 aaKnown RBP22.96■■□□□ 1.27
CALM3-212ENST00000599839 VGFO15240 615 aaPredicted RBP22.96■■□□□ 1.27
CALM3-212ENST00000599839 PTPRUQ92729 1446 aa22.95■■□□□ 1.26
CALM3-212ENST00000599839 ASXL1Q8IXJ9 1541 aa22.95■■□□□ 1.26
CALM3-212ENST00000599839 TBX22Q9Y458 520 aa22.94■■□□□ 1.26
CALM3-212ENST00000599839 METP08581 1390 aa22.93■■□□□ 1.26
CALM3-212ENST00000599839 LRRC7Q96NW7 1537 aa22.92■■□□□ 1.26
CALM3-212ENST00000599839 LAMC1P11047 1609 aa22.91■■□□□ 1.26
CALM3-212ENST00000599839 NEUROD1Q13562 356 aa22.9■■□□□ 1.26
CALM3-212ENST00000599839 CERKQ8TCT0 537 aa22.9■■□□□ 1.26
CALM3-212ENST00000599839 DCAF11Q8TEB1 546 aa22.89■■□□□ 1.26
CALM3-212ENST00000599839 NKTRP30414 1462 aaKnown RBP22.89■■□□□ 1.26
CALM3-212ENST00000599839 KCNA6P17658 529 aa22.89■■□□□ 1.25
CALM3-212ENST00000599839 PIK3R4Q99570 1358 aa22.88■■□□□ 1.25
CALM3-212ENST00000599839 KDM2AQ9Y2K7 1162 aa22.88■■□□□ 1.25
CALM3-212ENST00000599839 IQSEC2Q5JU85 1478 aa22.84■■□□□ 1.25
CALM3-212ENST00000599839 KNDC1Q76NI1 1749 aa22.84■■□□□ 1.25
CALM3-212ENST00000599839 L3MBTL2Q969R5 705 aa22.83■■□□□ 1.25
CALM3-212ENST00000599839 RBM33Q96EV2 1170 aaKnown RBP22.83■■□□□ 1.25
CALM3-212ENST00000599839 CFAP70Q5T0N1 1121 aa22.82■■□□□ 1.24
CALM3-212ENST00000599839 AMOTL2Q9Y2J4 779 aa22.82■■□□□ 1.24
CALM3-212ENST00000599839 ADGRB1O14514 1584 aa22.82■■□□□ 1.24
CALM3-212ENST00000599839 TMEM94Q12767 1356 aa22.81■■□□□ 1.24
CALM3-212ENST00000599839 KIAA1210Q9ULL0 1709 aa22.81■■□□□ 1.24
CALM3-212ENST00000599839 PRAG1Q86YV5 1406 aa22.81■■□□□ 1.24
CALM3-212ENST00000599839 C14orf93Q9H972 538 aaKnown RBP22.8■■□□□ 1.24
CALM3-212ENST00000599839 TMEM132EQ6IEE7 984 aa22.79■■□□□ 1.24
CALM3-212ENST00000599839 NALCNQ8IZF0 1738 aa22.79■■□□□ 1.24
CALM3-212ENST00000599839 TRPM1Q7Z4N2 1603 aa22.77■■□□□ 1.24
CALM3-212ENST00000599839 PTCH1Q13635 1447 aa22.77■■□□□ 1.24
CALM3-212ENST00000599839 PROSER2Q86WR7 435 aaPredicted RBP22.76■■□□□ 1.23
CALM3-212ENST00000599839 ROBO2Q9HCK4 1378 aa22.76■■□□□ 1.23
CALM3-212ENST00000599839 YTHDC2Q9H6S0 1430 aaKnown RBP22.76■■□□□ 1.23
CALM3-212ENST00000599839 STAC3Q96MF2 364 aa22.75■■□□□ 1.23
CALM3-212ENST00000599839 LRPPRCP42704 1394 aaKnown RBP22.74■■□□□ 1.23
CALM3-212ENST00000599839 TONSLQ96HA7 1378 aa22.74■■□□□ 1.23
CALM3-212ENST00000599839 TECPR2O15040 1411 aa22.74■■□□□ 1.23
CALM3-212ENST00000599839 CCER1Q8TC90 406 aaPredicted RBP22.74■■□□□ 1.23
CALM3-212ENST00000599839 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.73■■□□□ 1.23
CALM3-212ENST00000599839 CLSPNQ9HAW4 1339 aa22.72■■□□□ 1.23
CALM3-212ENST00000599839 ARHGEF28Q8N1W1 1705 aaKnown RBP22.71■■□□□ 1.23
CALM3-212ENST00000599839 STK26Q9P289 416 aa22.71■■□□□ 1.23
CALM3-212ENST00000599839 ABCC11Q96J66 1382 aa22.68■■□□□ 1.22
CALM3-212ENST00000599839 PLEKHH1Q9ULM0 1364 aa22.68■■□□□ 1.22
CALM3-212ENST00000599839 NBPF8Q3BBV2 869 aa22.67■■□□□ 1.22
CALM3-212ENST00000599839 DLC1Q96QB1 1528 aa22.67■■□□□ 1.22
CALM3-212ENST00000599839 NCOA3Q9Y6Q9 1424 aa22.67■■□□□ 1.22
CALM3-212ENST00000599839 NBPF1Q3BBV0 1214 aa22.66■■□□□ 1.22
CALM3-212ENST00000599839 ADGRL3Q9HAR2 1447 aa22.66■■□□□ 1.22
CALM3-212ENST00000599839 UBAP1LF5GYI3 381 aa22.64■■□□□ 1.22
CALM3-212ENST00000599839 FBXO41Q8TF61 875 aa22.64■■□□□ 1.22
CALM3-212ENST00000599839 MSH6P52701 1360 aa22.64■■□□□ 1.21
CALM3-212ENST00000599839 WAPLQ7Z5K2 1190 aa22.63■■□□□ 1.21
CALM3-212ENST00000599839 FAM135BQ49AJ0 1406 aa22.62■■□□□ 1.21
CALM3-212ENST00000599839 C14orf37Q86TY3 774 aa22.62■■□□□ 1.21
CALM3-212ENST00000599839 TRAK1Q9UPV9 953 aa22.61■■□□□ 1.21
CALM3-212ENST00000599839 RALGAPBQ86X10 1494 aa22.6■■□□□ 1.21
CALM3-212ENST00000599839 CDC42BPGQ6DT37 1551 aa22.59■■□□□ 1.21
CALM3-212ENST00000599839 ILDR1Q86SU0 546 aaPredicted RBP22.59■■□□□ 1.21
CALM3-212ENST00000599839 ROBO1Q9Y6N7 1651 aa22.59■■□□□ 1.21
CALM3-212ENST00000599839 DCCP43146 1447 aa22.58■■□□□ 1.21
CALM3-212ENST00000599839 TOM1O60784 492 aa22.57■■□□□ 1.2
CALM3-212ENST00000599839 PRAM1Q96QH2 718 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms