RNA–Protein interactions for RNA: ENST00000599107.1

KCNN4-204, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 2

Gene KCNN4, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-204ENST00000599107 TMEM2Q9UHN6 1383 aa28.89■■■□□ 2.22
KCNN4-204ENST00000599107 FOXD1Q16676 465 aa28.87■■■□□ 2.21
KCNN4-204ENST00000599107 NPHP4O75161 1426 aaPredicted RBP28.86■■■□□ 2.21
KCNN4-204ENST00000599107 ANKRD30BQ9BXX2 1392 aa28.86■■■□□ 2.21
KCNN4-204ENST00000599107 SCAF11Q99590 1463 aaKnown RBP28.85■■■□□ 2.21
KCNN4-204ENST00000599107 IQGAP1P46940 1657 aa28.83■■■□□ 2.21
KCNN4-204ENST00000599107 PCGF6Q9BYE7 350 aa28.83■■■□□ 2.21
KCNN4-204ENST00000599107 ZFYVE9O95405 1425 aa28.83■■■□□ 2.21
KCNN4-204ENST00000599107 DHX57Q6P158 1386 aaKnown RBP28.78■■■□□ 2.2
KCNN4-204ENST00000599107 EID1Q9Y6B2 187 aa28.78■■■□□ 2.2
KCNN4-204ENST00000599107 HDGFP51858 240 aaKnown RBP28.77■■■□□ 2.2
KCNN4-204ENST00000599107 STRCP1A6NGW2 1772 aa28.77■■■□□ 2.2
KCNN4-204ENST00000599107 SPATA31E1Q6ZUB1 1445 aa28.77■■■□□ 2.2
KCNN4-204ENST00000599107 RIMS2Q9UQ26 1411 aa28.77■■■□□ 2.2
KCNN4-204ENST00000599107 ALKQ9UM73 1620 aa28.76■■■□□ 2.2
KCNN4-204ENST00000599107 SOCS7O14512 581 aa28.76■■■□□ 2.19
KCNN4-204ENST00000599107 CHGAP10645 457 aaKnown RBP28.76■■■□□ 2.19
KCNN4-204ENST00000599107 NEXMIFQ5QGS0 1516 aa28.75■■■□□ 2.19
KCNN4-204ENST00000599107 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.75■■■□□ 2.19
KCNN4-204ENST00000599107 RPGRIP1LQ68CZ1 1315 aa28.72■■■□□ 2.19
KCNN4-204ENST00000599107 TXNDC2Q86VQ3 553 aa28.72■■■□□ 2.19
KCNN4-204ENST00000599107 PPLO60437 1756 aa28.72■■■□□ 2.19
KCNN4-204ENST00000599107 TOM1O60784 492 aa28.71■■■□□ 2.19
KCNN4-204ENST00000599107 IFT172Q9UG01 1749 aa28.71■■■□□ 2.19
KCNN4-204ENST00000599107 LTKP29376 864 aa28.7■■■□□ 2.18
KCNN4-204ENST00000599107 HSPA1LP34931 641 aa28.7■■■□□ 2.18
KCNN4-204ENST00000599107 PIP4K2BP78356 416 aa28.69■■■□□ 2.18
KCNN4-204ENST00000599107 PLEKHG1Q9ULL1 1385 aa28.69■■■□□ 2.18
KCNN4-204ENST00000599107 LRRC7Q96NW7 1537 aa28.68■■■□□ 2.18
KCNN4-204ENST00000599107 ZNF326Q5BKZ1 582 aaKnown RBP28.67■■■□□ 2.18
KCNN4-204ENST00000599107 SCAF1Q9H7N4 1312 aaKnown RBP28.67■■■□□ 2.18
KCNN4-204ENST00000599107 DIP2AQ14689 1571 aa28.66■■■□□ 2.18
KCNN4-204ENST00000599107 SETBP1Q9Y6X0 1596 aa28.64■■■□□ 2.18
KCNN4-204ENST00000599107 PPP1R15AO75807 674 aaPredicted RBP28.63■■■□□ 2.17
KCNN4-204ENST00000599107 MYOM2P54296 1465 aa28.6■■■□□ 2.17
KCNN4-204ENST00000599107 MED1Q15648 1581 aaPredicted RBP28.6■■■□□ 2.17
KCNN4-204ENST00000599107 VGFO15240 615 aaPredicted RBP28.59■■■□□ 2.17
KCNN4-204ENST00000599107 NRXN3Q9Y4C0 1643 aa28.58■■■□□ 2.17
KCNN4-204ENST00000599107 STAC3Q96MF2 364 aa28.56■■■□□ 2.16
KCNN4-204ENST00000599107 CLSPNQ9HAW4 1339 aa28.55■■■□□ 2.16
KCNN4-204ENST00000599107 XIRP1Q702N8 1843 aaKnown RBP28.54■■■□□ 2.16
KCNN4-204ENST00000599107 ADAMTS13Q76LX8 1427 aa28.53■■■□□ 2.16
KCNN4-204ENST00000599107 RGL3Q3MIN7 710 aa28.53■■■□□ 2.16
KCNN4-204ENST00000599107 NRXN1Q9ULB1 1477 aa28.53■■■□□ 2.16
KCNN4-204ENST00000599107 PIK3R4Q99570 1358 aa28.5■■■□□ 2.15
KCNN4-204ENST00000599107 LAMC1P11047 1609 aa28.5■■■□□ 2.15
KCNN4-204ENST00000599107 NUTM2DQ5VT03 806 aaPredicted RBP28.49■■■□□ 2.15
KCNN4-204ENST00000599107 TBX22Q9Y458 520 aa28.49■■■□□ 2.15
KCNN4-204ENST00000599107 PIK3C2GO75747 1445 aa28.49■■■□□ 2.15
KCNN4-204ENST00000599107 NWD1Q149M9 1564 aa28.49■■■□□ 2.15
KCNN4-204ENST00000599107 SETD1AO15047 1707 aaKnown RBP28.49■■■□□ 2.15
KCNN4-204ENST00000599107 CHD2O14647 1828 aaKnown RBP28.46■■■□□ 2.15
KCNN4-204ENST00000599107 BCANQ96GW7 911 aa28.45■■■□□ 2.14
KCNN4-204ENST00000599107 SLC26A8Q96RN1 970 aa28.43■■■□□ 2.14
KCNN4-204ENST00000599107 ADGRF5Q8IZF2 1346 aa28.43■■■□□ 2.14
KCNN4-204ENST00000599107 NKTRP30414 1462 aaKnown RBP28.42■■■□□ 2.14
KCNN4-204ENST00000599107 SIN3AQ96ST3 1273 aa28.41■■■□□ 2.14
KCNN4-204ENST00000599107 DCAF11Q8TEB1 546 aa28.39■■■□□ 2.14
KCNN4-204ENST00000599107 XRN1Q8IZH2 1706 aaKnown RBP28.38■■■□□ 2.13
KCNN4-204ENST00000599107 PRAG1Q86YV5 1406 aa28.37■■■□□ 2.13
KCNN4-204ENST00000599107 KCNA6P17658 529 aa28.37■■■□□ 2.13
KCNN4-204ENST00000599107 SENP3Q9H4L4 574 aaPredicted RBP28.37■■■□□ 2.13
KCNN4-204ENST00000599107 KIAA1210Q9ULL0 1709 aa28.36■■■□□ 2.13
KCNN4-204ENST00000599107 TMEM94Q12767 1356 aa28.35■■■□□ 2.13
KCNN4-204ENST00000599107 NEUROD1Q13562 356 aa28.34■■■□□ 2.13
KCNN4-204ENST00000599107 METP08581 1390 aa28.33■■■□□ 2.13
KCNN4-204ENST00000599107 TONSLQ96HA7 1378 aa28.33■■■□□ 2.13
KCNN4-204ENST00000599107 CCER1Q8TC90 406 aaPredicted RBP28.31■■■□□ 2.12
KCNN4-204ENST00000599107 L3MBTL2Q969R5 705 aa28.31■■■□□ 2.12
KCNN4-204ENST00000599107 C14orf93Q9H972 538 aaKnown RBP28.31■■■□□ 2.12
KCNN4-204ENST00000599107 KNDC1Q76NI1 1749 aa28.3■■■□□ 2.12
KCNN4-204ENST00000599107 ASXL1Q8IXJ9 1541 aa28.3■■■□□ 2.12
KCNN4-204ENST00000599107 FAM135BQ49AJ0 1406 aa28.3■■■□□ 2.12
KCNN4-204ENST00000599107 PTPRUQ92729 1446 aa28.29■■■□□ 2.12
KCNN4-204ENST00000599107 TIMELESSQ9UNS1 1208 aa28.28■■■□□ 2.12
KCNN4-204ENST00000599107 KDM2AQ9Y2K7 1162 aa28.28■■■□□ 2.12
KCNN4-204ENST00000599107 PTCH1Q13635 1447 aa28.27■■■□□ 2.12
KCNN4-204ENST00000599107 PHF23Q9BUL5 403 aaPredicted RBP28.27■■■□□ 2.12
KCNN4-204ENST00000599107 ADGRB1O14514 1584 aa28.26■■■□□ 2.11
KCNN4-204ENST00000599107 TECPR2O15040 1411 aa28.26■■■□□ 2.11
KCNN4-204ENST00000599107 NCOA3Q9Y6Q9 1424 aa28.26■■■□□ 2.11
KCNN4-204ENST00000599107 RBM33Q96EV2 1170 aaKnown RBP28.25■■■□□ 2.11
KCNN4-204ENST00000599107 PROSER2Q86WR7 435 aaPredicted RBP28.24■■■□□ 2.11
KCNN4-204ENST00000599107 ROBO1Q9Y6N7 1651 aa28.23■■■□□ 2.11
KCNN4-204ENST00000599107 AMOTL2Q9Y2J4 779 aa28.23■■■□□ 2.11
KCNN4-204ENST00000599107 LRPPRCP42704 1394 aaKnown RBP28.23■■■□□ 2.11
KCNN4-204ENST00000599107 CFAP70Q5T0N1 1121 aa28.21■■■□□ 2.11
KCNN4-204ENST00000599107 TRPM1Q7Z4N2 1603 aa28.21■■■□□ 2.11
KCNN4-204ENST00000599107 YTHDC2Q9H6S0 1430 aaKnown RBP28.2■■■□□ 2.11
KCNN4-204ENST00000599107 ABCC11Q96J66 1382 aa28.2■■■□□ 2.1
KCNN4-204ENST00000599107 DLC1Q96QB1 1528 aa28.18■■■□□ 2.1
KCNN4-204ENST00000599107 RGS17Q9UGC6 210 aaPredicted RBP28.17■■■□□ 2.1
KCNN4-204ENST00000599107 MSH6P52701 1360 aa28.13■■■□□ 2.09
KCNN4-204ENST00000599107 SIRT1Q96EB6 747 aa28.13■■■□□ 2.09
KCNN4-204ENST00000599107 ROBO2Q9HCK4 1378 aa28.11■■■□□ 2.09
KCNN4-204ENST00000599107 TMEM132EQ6IEE7 984 aa28.11■■■□□ 2.09
KCNN4-204ENST00000599107 DCCP43146 1447 aa28.1■■■□□ 2.09
KCNN4-204ENST00000599107 RALGAPBQ86X10 1494 aa28.1■■■□□ 2.09
KCNN4-204ENST00000599107 NALCNQ8IZF0 1738 aa28.08■■■□□ 2.09
KCNN4-204ENST00000599107 ARHGEF28Q8N1W1 1705 aaKnown RBP28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms