RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 SLC26A8Q96RN1 970 aa28.05■■■□□ 2.08
SNRPA-205ENST00000598923 NWD1Q149M9 1564 aa28.04■■■□□ 2.08
SNRPA-205ENST00000598923 KCNA6P17658 529 aa28.04■■■□□ 2.08
SNRPA-205ENST00000598923 MED1Q15648 1581 aaPredicted RBP28.03■■■□□ 2.08
SNRPA-205ENST00000598923 RIMS2Q9UQ26 1411 aa28.01■■■□□ 2.07
SNRPA-205ENST00000598923 NUP155O75694 1391 aa28■■■□□ 2.07
SNRPA-205ENST00000598923 PLEKHG1Q9ULL1 1385 aa28■■■□□ 2.07
SNRPA-205ENST00000598923 SOCS7O14512 581 aa28■■■□□ 2.07
SNRPA-205ENST00000598923 CHD2O14647 1828 aaKnown RBP27.99■■■□□ 2.07
SNRPA-205ENST00000598923 NKTRP30414 1462 aaKnown RBP27.98■■■□□ 2.07
SNRPA-205ENST00000598923 TMEM94Q12767 1356 aa27.98■■■□□ 2.07
SNRPA-205ENST00000598923 HDGFP51858 240 aaKnown RBP27.95■■■□□ 2.06
SNRPA-205ENST00000598923 NAIPQ13075 1403 aa27.93■■■□□ 2.06
SNRPA-205ENST00000598923 SPHKAPQ2M3C7 1700 aa27.93■■■□□ 2.06
SNRPA-205ENST00000598923 PROSER2Q86WR7 435 aaPredicted RBP27.93■■■□□ 2.06
SNRPA-205ENST00000598923 BCANQ96GW7 911 aa27.93■■■□□ 2.06
SNRPA-205ENST00000598923 CHGAP10645 457 aaKnown RBP27.91■■■□□ 2.06
SNRPA-205ENST00000598923 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.91■■■□□ 2.06
SNRPA-205ENST00000598923 PPP1R15AO75807 674 aaPredicted RBP27.9■■■□□ 2.06
SNRPA-205ENST00000598923 TRIM52Q96A61 297 aa27.9■■■□□ 2.06
SNRPA-205ENST00000598923 FAM135BQ49AJ0 1406 aa27.9■■■□□ 2.06
SNRPA-205ENST00000598923 SENP3Q9H4L4 574 aaPredicted RBP27.89■■■□□ 2.06
SNRPA-205ENST00000598923 TBX22Q9Y458 520 aa27.89■■■□□ 2.06
SNRPA-205ENST00000598923 ADAMTS13Q76LX8 1427 aa27.88■■■□□ 2.05
SNRPA-205ENST00000598923 RBM33Q96EV2 1170 aaKnown RBP27.88■■■□□ 2.05
SNRPA-205ENST00000598923 DIP2AQ14689 1571 aa27.87■■■□□ 2.05
SNRPA-205ENST00000598923 HFM1A2PYH4 1435 aa27.86■■■□□ 2.05
SNRPA-205ENST00000598923 ROBO1Q9Y6N7 1651 aa27.86■■■□□ 2.05
SNRPA-205ENST00000598923 NUTM2DQ5VT03 806 aaPredicted RBP27.83■■■□□ 2.05
SNRPA-205ENST00000598923 MSH6P52701 1360 aa27.81■■■□□ 2.04
SNRPA-205ENST00000598923 PIK3R4Q99570 1358 aa27.8■■■□□ 2.04
SNRPA-205ENST00000598923 NRXN3Q9Y4C0 1643 aa27.78■■■□□ 2.04
SNRPA-205ENST00000598923 NCOA3Q9Y6Q9 1424 aa27.78■■■□□ 2.04
SNRPA-205ENST00000598923 CLTCL1P53675 1640 aa27.78■■■□□ 2.04
SNRPA-205ENST00000598923 TRPM2O94759 1503 aa27.77■■■□□ 2.04
SNRPA-205ENST00000598923 SETBP1Q9Y6X0 1596 aa27.74■■■□□ 2.03
SNRPA-205ENST00000598923 SLC4A1APQ9BWU0 796 aaKnown RBP27.74■■■□□ 2.03
SNRPA-205ENST00000598923 KIF1BO60333 1816 aa27.74■■■□□ 2.03
SNRPA-205ENST00000598923 SLAIN2Q9P270 581 aa27.73■■■□□ 2.03
SNRPA-205ENST00000598923 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.72■■■□□ 2.03
SNRPA-205ENST00000598923 PHF23Q9BUL5 403 aaPredicted RBP27.72■■■□□ 2.03
SNRPA-205ENST00000598923 PTPRUQ92729 1446 aa27.72■■■□□ 2.03
SNRPA-205ENST00000598923 PHLPP1O60346 1717 aa27.7■■■□□ 2.02
SNRPA-205ENST00000598923 XRN1Q8IZH2 1706 aaKnown RBP27.7■■■□□ 2.02
SNRPA-205ENST00000598923 NEXMIFQ5QGS0 1516 aa27.69■■■□□ 2.02
SNRPA-205ENST00000598923 AMOTL2Q9Y2J4 779 aa27.67■■■□□ 2.02
SNRPA-205ENST00000598923 ZNF326Q5BKZ1 582 aaKnown RBP27.66■■■□□ 2.02
SNRPA-205ENST00000598923 SETD5Q9C0A6 1442 aa27.65■■■□□ 2.02
SNRPA-205ENST00000598923 FOXD1Q16676 465 aa27.63■■■□□ 2.01
SNRPA-205ENST00000598923 C19orf44Q9H6X5 657 aa27.63■■■□□ 2.01
SNRPA-205ENST00000598923 C14orf37Q86TY3 774 aa27.62■■■□□ 2.01
SNRPA-205ENST00000598923 RGS17Q9UGC6 210 aaPredicted RBP27.62■■■□□ 2.01
SNRPA-205ENST00000598923 COL16A1Q07092 1604 aaPredicted RBP27.62■■■□□ 2.01
SNRPA-205ENST00000598923 MPHOSPH9Q99550 1183 aa27.61■■■□□ 2.01
SNRPA-205ENST00000598923 CADPS2Q86UW7 1296 aa27.6■■■□□ 2.01
SNRPA-205ENST00000598923 METP08581 1390 aa27.6■■■□□ 2.01
SNRPA-205ENST00000598923 ATF3P18847 181 aa27.57■■■□□ 2
SNRPA-205ENST00000598923 SETD1AO15047 1707 aaKnown RBP27.57■■■□□ 2
SNRPA-205ENST00000598923 DCCP43146 1447 aa27.57■■■□□ 2
SNRPA-205ENST00000598923 AHDC1Q5TGY3 1603 aaPredicted RBP27.56■■■□□ 2
SNRPA-205ENST00000598923 RAB3GAP2Q9H2M9 1393 aa27.56■■■□□ 2
SNRPA-205ENST00000598923 PPLO60437 1756 aa27.54■■■□□ 2
SNRPA-205ENST00000598923 JCADQ9P266 1359 aa27.54■■■□□ 2
SNRPA-205ENST00000598923 ACIN1Q9UKV3 1341 aaKnown RBP27.53■■■□□ 2
SNRPA-205ENST00000598923 NALCNQ8IZF0 1738 aa27.5■■□□□ 1.99
SNRPA-205ENST00000598923 RPGRIP1LQ68CZ1 1315 aa27.49■■□□□ 1.99
SNRPA-205ENST00000598923 VGFO15240 615 aaPredicted RBP27.49■■□□□ 1.99
SNRPA-205ENST00000598923 SHPRHQ149N8 1683 aa27.48■■□□□ 1.99
SNRPA-205ENST00000598923 BRINP3Q76B58 766 aa27.47■■□□□ 1.99
SNRPA-205ENST00000598923 MST1RQ04912 1400 aa27.47■■□□□ 1.99
SNRPA-205ENST00000598923 ADGRL3Q9HAR2 1447 aa27.47■■□□□ 1.99
SNRPA-205ENST00000598923 ASXL1Q8IXJ9 1541 aa27.45■■□□□ 1.98
SNRPA-205ENST00000598923 NHSL1Q5SYE7 1610 aa27.45■■□□□ 1.98
SNRPA-205ENST00000598923 POTEAQ6S8J7 498 aa27.44■■□□□ 1.98
SNRPA-205ENST00000598923 PTCH1Q13635 1447 aa27.42■■□□□ 1.98
SNRPA-205ENST00000598923 PRAG1Q86YV5 1406 aa27.42■■□□□ 1.98
SNRPA-205ENST00000598923 SPATA31A6Q5VVP1 1343 aa27.41■■□□□ 1.98
SNRPA-205ENST00000598923 LRP6O75581 1613 aa27.41■■□□□ 1.98
SNRPA-205ENST00000598923 IFT172Q9UG01 1749 aa27.41■■□□□ 1.98
SNRPA-205ENST00000598923 CCDC144AA2RUR9 1427 aa27.39■■□□□ 1.97
SNRPA-205ENST00000598923 HRCP23327 699 aa27.38■■□□□ 1.97
SNRPA-205ENST00000598923 RGL3Q3MIN7 710 aa27.38■■□□□ 1.97
SNRPA-205ENST00000598923 ROBO2Q9HCK4 1378 aa27.37■■□□□ 1.97
SNRPA-205ENST00000598923 SPATA31E1Q6ZUB1 1445 aa27.37■■□□□ 1.97
SNRPA-205ENST00000598923 LAMC1P11047 1609 aa27.32■■□□□ 1.96
SNRPA-205ENST00000598923 C1orf167Q5SNV9 1468 aa27.31■■□□□ 1.96
SNRPA-205ENST00000598923 ADGRF5Q8IZF2 1346 aa27.3■■□□□ 1.96
SNRPA-205ENST00000598923 ANKRD30BQ9BXX2 1392 aa27.28■■□□□ 1.96
SNRPA-205ENST00000598923 DDX17Q92841 729 aaKnown RBP27.26■■□□□ 1.95
SNRPA-205ENST00000598923 LRRC59Q96AG4 307 aaKnown RBP27.26■■□□□ 1.95
SNRPA-205ENST00000598923 MEX3CQ5U5Q3 659 aaKnown RBP27.25■■□□□ 1.95
SNRPA-205ENST00000598923 KNDC1Q76NI1 1749 aa27.24■■□□□ 1.95
SNRPA-205ENST00000598923 TECPR2O15040 1411 aa27.23■■□□□ 1.95
SNRPA-205ENST00000598923 PIK3C2GO75747 1445 aa27.23■■□□□ 1.95
SNRPA-205ENST00000598923 CDC42BPGQ6DT37 1551 aa27.22■■□□□ 1.95
SNRPA-205ENST00000598923 PNPLA6Q8IY17 1366 aa27.22■■□□□ 1.95
SNRPA-205ENST00000598923 NUTM2BA6NNL0 878 aaPredicted RBP27.21■■□□□ 1.95
SNRPA-205ENST00000598923 NUTM2EB1AL46 878 aaPredicted RBP27.21■■□□□ 1.95
SNRPA-205ENST00000598923 ZNF772Q68DY9 489 aaPredicted RBP27.21■■□□□ 1.95
SNRPA-205ENST00000598923 NUTM2AQ8IVF1 878 aaPredicted RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms