RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 NKTRP30414 1462 aaKnown RBP24.23■■□□□ 1.47
SMG9-208ENST00000598886 STAG3Q9UJ98 1225 aa24.22■■□□□ 1.47
SMG9-208ENST00000598886 RIMS2Q9UQ26 1411 aa24.19■■□□□ 1.46
SMG9-208ENST00000598886 PLEKHG1Q9ULL1 1385 aa24.19■■□□□ 1.46
SMG9-208ENST00000598886 SPHKAPQ2M3C7 1700 aa24.18■■□□□ 1.46
SMG9-208ENST00000598886 TMEM94Q12767 1356 aa24.18■■□□□ 1.46
SMG9-208ENST00000598886 KCNA6P17658 529 aa24.18■■□□□ 1.46
SMG9-208ENST00000598886 SLC26A8Q96RN1 970 aa24.18■■□□□ 1.46
SMG9-208ENST00000598886 ROBO1Q9Y6N7 1651 aa24.16■■□□□ 1.46
SMG9-208ENST00000598886 DIP2AQ14689 1571 aa24.14■■□□□ 1.45
SMG9-208ENST00000598886 RRBP1Q9P2E9 1410 aaKnown RBP24.14■■□□□ 1.45
SMG9-208ENST00000598886 FAM135BQ49AJ0 1406 aa24.13■■□□□ 1.45
SMG9-208ENST00000598886 ADAMTS13Q76LX8 1427 aa24.13■■□□□ 1.45
SMG9-208ENST00000598886 NRXN3Q9Y4C0 1643 aa24.12■■□□□ 1.45
SMG9-208ENST00000598886 NUP155O75694 1391 aa24.11■■□□□ 1.45
SMG9-208ENST00000598886 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
SMG9-208ENST00000598886 RBM33Q96EV2 1170 aaKnown RBP24.06■■□□□ 1.44
SMG9-208ENST00000598886 CLTCL1P53675 1640 aa24.06■■□□□ 1.44
SMG9-208ENST00000598886 ITGAEP38570 1179 aa24.05■■□□□ 1.44
SMG9-208ENST00000598886 PROSER2Q86WR7 435 aaPredicted RBP24.05■■□□□ 1.44
SMG9-208ENST00000598886 XRN1Q8IZH2 1706 aaKnown RBP24.04■■□□□ 1.44
SMG9-208ENST00000598886 SETBP1Q9Y6X0 1596 aa24.04■■□□□ 1.44
SMG9-208ENST00000598886 NAIPQ13075 1403 aa24.04■■□□□ 1.44
SMG9-208ENST00000598886 TBX22Q9Y458 520 aa24.03■■□□□ 1.44
SMG9-208ENST00000598886 TRPM2O94759 1503 aa24.03■■□□□ 1.44
SMG9-208ENST00000598886 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.02■■□□□ 1.44
SMG9-208ENST00000598886 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
SMG9-208ENST00000598886 PIK3R4Q99570 1358 aa24.01■■□□□ 1.43
SMG9-208ENST00000598886 ABCF1Q8NE71 845 aaKnown RBP eCLIP24■■□□□ 1.43
SMG9-208ENST00000598886 PTPRUQ92729 1446 aa24■■□□□ 1.43
SMG9-208ENST00000598886 NCOA3Q9Y6Q9 1424 aa24■■□□□ 1.43
SMG9-208ENST00000598886 PHLPP1O60346 1717 aa23.99■■□□□ 1.43
SMG9-208ENST00000598886 PPP1R15AO75807 674 aaPredicted RBP23.99■■□□□ 1.43
SMG9-208ENST00000598886 MSH6P52701 1360 aa23.99■■□□□ 1.43
SMG9-208ENST00000598886 NEXMIFQ5QGS0 1516 aa23.99■■□□□ 1.43
SMG9-208ENST00000598886 COL16A1Q07092 1604 aaPredicted RBP23.99■■□□□ 1.43
SMG9-208ENST00000598886 HDGFP51858 240 aaKnown RBP23.98■■□□□ 1.43
SMG9-208ENST00000598886 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
SMG9-208ENST00000598886 KIF1BO60333 1816 aa23.96■■□□□ 1.43
SMG9-208ENST00000598886 CHGAP10645 457 aaKnown RBP23.96■■□□□ 1.43
SMG9-208ENST00000598886 BCANQ96GW7 911 aa23.96■■□□□ 1.43
SMG9-208ENST00000598886 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
SMG9-208ENST00000598886 HFM1A2PYH4 1435 aa23.94■■□□□ 1.42
SMG9-208ENST00000598886 RGS17Q9UGC6 210 aaPredicted RBP23.94■■□□□ 1.42
SMG9-208ENST00000598886 AHDC1Q5TGY3 1603 aaPredicted RBP23.92■■□□□ 1.42
SMG9-208ENST00000598886 SLAIN2Q9P270 581 aa23.91■■□□□ 1.42
SMG9-208ENST00000598886 PHF23Q9BUL5 403 aaPredicted RBP23.88■■□□□ 1.41
SMG9-208ENST00000598886 NALCNQ8IZF0 1738 aa23.87■■□□□ 1.41
SMG9-208ENST00000598886 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
SMG9-208ENST00000598886 PPLO60437 1756 aa23.86■■□□□ 1.41
SMG9-208ENST00000598886 DCCP43146 1447 aa23.85■■□□□ 1.41
SMG9-208ENST00000598886 METP08581 1390 aa23.85■■□□□ 1.41
SMG9-208ENST00000598886 AMOTL2Q9Y2J4 779 aa23.83■■□□□ 1.41
SMG9-208ENST00000598886 NHSL1Q5SYE7 1610 aa23.83■■□□□ 1.41
SMG9-208ENST00000598886 C19orf44Q9H6X5 657 aa23.81■■□□□ 1.4
SMG9-208ENST00000598886 LRP6O75581 1613 aa23.8■■□□□ 1.4
SMG9-208ENST00000598886 JCADQ9P266 1359 aa23.79■■□□□ 1.4
SMG9-208ENST00000598886 MST1RQ04912 1400 aa23.78■■□□□ 1.4
SMG9-208ENST00000598886 PRAG1Q86YV5 1406 aa23.78■■□□□ 1.4
SMG9-208ENST00000598886 CADPS2Q86UW7 1296 aa23.78■■□□□ 1.4
SMG9-208ENST00000598886 IFT172Q9UG01 1749 aa23.78■■□□□ 1.4
SMG9-208ENST00000598886 ASXL1Q8IXJ9 1541 aa23.78■■□□□ 1.4
SMG9-208ENST00000598886 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
SMG9-208ENST00000598886 ZNF326Q5BKZ1 582 aaKnown RBP23.75■■□□□ 1.39
SMG9-208ENST00000598886 LAMC1P11047 1609 aa23.74■■□□□ 1.39
SMG9-208ENST00000598886 POTEAQ6S8J7 498 aa23.74■■□□□ 1.39
SMG9-208ENST00000598886 C14orf37Q86TY3 774 aa23.73■■□□□ 1.39
SMG9-208ENST00000598886 PTCH1Q13635 1447 aa23.73■■□□□ 1.39
SMG9-208ENST00000598886 ATF3P18847 181 aa23.72■■□□□ 1.39
SMG9-208ENST00000598886 BRINP3Q76B58 766 aa23.72■■□□□ 1.39
SMG9-208ENST00000598886 SPATA31A6Q5VVP1 1343 aa23.67■■□□□ 1.38
SMG9-208ENST00000598886 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
SMG9-208ENST00000598886 SLC4A1APQ9BWU0 796 aaKnown RBP23.67■■□□□ 1.38
SMG9-208ENST00000598886 SPATA31E1Q6ZUB1 1445 aa23.67■■□□□ 1.38
SMG9-208ENST00000598886 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
SMG9-208ENST00000598886 ROBO2Q9HCK4 1378 aa23.66■■□□□ 1.38
SMG9-208ENST00000598886 RPGRIP1LQ68CZ1 1315 aa23.65■■□□□ 1.38
SMG9-208ENST00000598886 VGFO15240 615 aaPredicted RBP23.62■■□□□ 1.37
SMG9-208ENST00000598886 FOXD1Q16676 465 aa23.62■■□□□ 1.37
SMG9-208ENST00000598886 C1orf167Q5SNV9 1468 aa23.62■■□□□ 1.37
SMG9-208ENST00000598886 KNDC1Q76NI1 1749 aa23.62■■□□□ 1.37
SMG9-208ENST00000598886 CDC42BPGQ6DT37 1551 aa23.6■■□□□ 1.37
SMG9-208ENST00000598886 CCDC144AA2RUR9 1427 aa23.58■■□□□ 1.36
SMG9-208ENST00000598886 TECPR2O15040 1411 aa23.56■■□□□ 1.36
SMG9-208ENST00000598886 ADGRF5Q8IZF2 1346 aa23.55■■□□□ 1.36
SMG9-208ENST00000598886 PNPLA6Q8IY17 1366 aa23.54■■□□□ 1.36
SMG9-208ENST00000598886 PIK3C2GO75747 1445 aa23.54■■□□□ 1.36
SMG9-208ENST00000598886 DDX17Q92841 729 aaKnown RBP23.54■■□□□ 1.36
SMG9-208ENST00000598886 MPHOSPH9Q99550 1183 aa23.54■■□□□ 1.36
SMG9-208ENST00000598886 COL22A1Q8NFW1 1626 aaPredicted RBP23.53■■□□□ 1.36
SMG9-208ENST00000598886 ANKRD30BQ9BXX2 1392 aa23.51■■□□□ 1.35
SMG9-208ENST00000598886 NRXN1Q9ULB1 1477 aa23.5■■□□□ 1.35
SMG9-208ENST00000598886 FMN2Q9NZ56 1722 aa23.49■■□□□ 1.35
SMG9-208ENST00000598886 LRRC59Q96AG4 307 aaKnown RBP23.47■■□□□ 1.35
SMG9-208ENST00000598886 SOS2Q07890 1332 aaPredicted RBP23.47■■□□□ 1.35
SMG9-208ENST00000598886 LRPPRCP42704 1394 aaKnown RBP23.47■■□□□ 1.35
SMG9-208ENST00000598886 MYOM2P54296 1465 aa23.46■■□□□ 1.35
SMG9-208ENST00000598886 ORAI2Q96SN7 254 aa23.46■■□□□ 1.35
SMG9-208ENST00000598886 CDK12Q9NYV4 1490 aaPredicted RBP23.46■■□□□ 1.35
SMG9-208ENST00000598886 PXDNQ92626 1479 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms