RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 SLC26A8Q96RN1 970 aa21.94■■□□□ 1.1
XRCC1-208ENST00000598422 TMEM131LA2VDJ0 1609 aa21.93■■□□□ 1.1
XRCC1-208ENST00000598422 LRRC7Q96NW7 1537 aa21.92■■□□□ 1.1
XRCC1-208ENST00000598422 PLEKHG1Q9ULL1 1385 aa21.92■■□□□ 1.1
XRCC1-208ENST00000598422 SENP3Q9H4L4 574 aaPredicted RBP21.92■■□□□ 1.1
XRCC1-208ENST00000598422 PIP4K2BP78356 416 aa21.9■■□□□ 1.1
XRCC1-208ENST00000598422 SLC4A1APQ9BWU0 796 aaKnown RBP21.9■■□□□ 1.1
XRCC1-208ENST00000598422 NUTM2DQ5VT03 806 aaPredicted RBP21.88■■□□□ 1.09
XRCC1-208ENST00000598422 KCNA6P17658 529 aa21.87■■□□□ 1.09
XRCC1-208ENST00000598422 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
XRCC1-208ENST00000598422 TRPM2O94759 1503 aa21.85■■□□□ 1.09
XRCC1-208ENST00000598422 SPHKAPQ2M3C7 1700 aa21.85■■□□□ 1.09
XRCC1-208ENST00000598422 STRCP1A6NGW2 1772 aa21.84■■□□□ 1.09
XRCC1-208ENST00000598422 PROSER2Q86WR7 435 aaPredicted RBP21.82■■□□□ 1.08
XRCC1-208ENST00000598422 TMEM94Q12767 1356 aa21.82■■□□□ 1.08
XRCC1-208ENST00000598422 NKTRP30414 1462 aaKnown RBP21.82■■□□□ 1.08
XRCC1-208ENST00000598422 TBX22Q9Y458 520 aa21.81■■□□□ 1.08
XRCC1-208ENST00000598422 MYO5BQ9ULV0 1848 aa21.8■■□□□ 1.08
XRCC1-208ENST00000598422 CLTCL1P53675 1640 aa21.79■■□□□ 1.08
XRCC1-208ENST00000598422 NWD1Q149M9 1564 aa21.78■■□□□ 1.08
XRCC1-208ENST00000598422 ADAMTS13Q76LX8 1427 aa21.78■■□□□ 1.08
XRCC1-208ENST00000598422 DIP2AQ14689 1571 aa21.78■■□□□ 1.08
XRCC1-208ENST00000598422 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
XRCC1-208ENST00000598422 HSPA1LP34931 641 aa21.76■■□□□ 1.07
XRCC1-208ENST00000598422 SETD5Q9C0A6 1442 aa21.76■■□□□ 1.07
XRCC1-208ENST00000598422 RBM33Q96EV2 1170 aaKnown RBP21.75■■□□□ 1.07
XRCC1-208ENST00000598422 PIK3R4Q99570 1358 aa21.74■■□□□ 1.07
XRCC1-208ENST00000598422 FOXD1Q16676 465 aa21.74■■□□□ 1.07
XRCC1-208ENST00000598422 MPHOSPH9Q99550 1183 aa21.74■■□□□ 1.07
XRCC1-208ENST00000598422 ALKQ9UM73 1620 aa21.73■■□□□ 1.07
XRCC1-208ENST00000598422 MSH6P52701 1360 aa21.73■■□□□ 1.07
XRCC1-208ENST00000598422 DISP3Q9P2K9 1392 aa21.73■■□□□ 1.07
XRCC1-208ENST00000598422 CCDC144AA2RUR9 1427 aa21.72■■□□□ 1.07
XRCC1-208ENST00000598422 C14orf37Q86TY3 774 aa21.71■■□□□ 1.07
XRCC1-208ENST00000598422 NEXMIFQ5QGS0 1516 aa21.7■■□□□ 1.06
XRCC1-208ENST00000598422 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
XRCC1-208ENST00000598422 VGFO15240 615 aaPredicted RBP21.68■■□□□ 1.06
XRCC1-208ENST00000598422 RAB3GAP2Q9H2M9 1393 aa21.68■■□□□ 1.06
XRCC1-208ENST00000598422 RPGRIP1LQ68CZ1 1315 aa21.67■■□□□ 1.06
XRCC1-208ENST00000598422 AMOTL2Q9Y2J4 779 aa21.67■■□□□ 1.06
XRCC1-208ENST00000598422 NCOA3Q9Y6Q9 1424 aa21.64■■□□□ 1.06
XRCC1-208ENST00000598422 KIF1BO60333 1816 aa21.64■■□□□ 1.06
XRCC1-208ENST00000598422 CHD2O14647 1828 aaKnown RBP21.63■■□□□ 1.05
XRCC1-208ENST00000598422 XIRP1Q702N8 1843 aaKnown RBP21.63■■□□□ 1.05
XRCC1-208ENST00000598422 FAM135BQ49AJ0 1406 aa21.63■■□□□ 1.05
XRCC1-208ENST00000598422 PTPRUQ92729 1446 aa21.63■■□□□ 1.05
XRCC1-208ENST00000598422 METP08581 1390 aa21.62■■□□□ 1.05
XRCC1-208ENST00000598422 NRXN3Q9Y4C0 1643 aa21.62■■□□□ 1.05
XRCC1-208ENST00000598422 RGL3Q3MIN7 710 aa21.6■■□□□ 1.05
XRCC1-208ENST00000598422 ATF3P18847 181 aa21.59■■□□□ 1.05
XRCC1-208ENST00000598422 C19orf44Q9H6X5 657 aa21.59■■□□□ 1.05
XRCC1-208ENST00000598422 CADPS2Q86UW7 1296 aa21.58■■□□□ 1.05
XRCC1-208ENST00000598422 SLAIN2Q9P270 581 aa21.58■■□□□ 1.05
XRCC1-208ENST00000598422 SPATA31E1Q6ZUB1 1445 aa21.57■■□□□ 1.04
XRCC1-208ENST00000598422 ANKRD30BQ9BXX2 1392 aa21.56■■□□□ 1.04
XRCC1-208ENST00000598422 XRN1Q8IZH2 1706 aaKnown RBP21.55■■□□□ 1.04
XRCC1-208ENST00000598422 ROBO1Q9Y6N7 1651 aa21.52■■□□□ 1.04
XRCC1-208ENST00000598422 DCCP43146 1447 aa21.52■■□□□ 1.04
XRCC1-208ENST00000598422 ADGRF5Q8IZF2 1346 aa21.52■■□□□ 1.03
XRCC1-208ENST00000598422 HRCP23327 699 aa21.51■■□□□ 1.03
XRCC1-208ENST00000598422 MED1Q15648 1581 aaPredicted RBP21.51■■□□□ 1.03
XRCC1-208ENST00000598422 PTCH1Q13635 1447 aa21.5■■□□□ 1.03
XRCC1-208ENST00000598422 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
XRCC1-208ENST00000598422 PPLO60437 1756 aa21.49■■□□□ 1.03
XRCC1-208ENST00000598422 ADGRL3Q9HAR2 1447 aa21.48■■□□□ 1.03
XRCC1-208ENST00000598422 ROBO2Q9HCK4 1378 aa21.47■■□□□ 1.03
XRCC1-208ENST00000598422 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.46■■□□□ 1.03
XRCC1-208ENST00000598422 PIK3C2GO75747 1445 aa21.45■■□□□ 1.02
XRCC1-208ENST00000598422 PRAG1Q86YV5 1406 aa21.45■■□□□ 1.02
XRCC1-208ENST00000598422 ILDR2Q71H61 639 aa21.44■■□□□ 1.02
XRCC1-208ENST00000598422 SETD1AO15047 1707 aaKnown RBP21.42■■□□□ 1.02
XRCC1-208ENST00000598422 STK26Q9P289 416 aa21.42■■□□□ 1.02
XRCC1-208ENST00000598422 MST1RQ04912 1400 aa21.41■■□□□ 1.02
XRCC1-208ENST00000598422 BRINP3Q76B58 766 aa21.41■■□□□ 1.02
XRCC1-208ENST00000598422 MYOM2P54296 1465 aa21.4■■□□□ 1.02
XRCC1-208ENST00000598422 JCADQ9P266 1359 aa21.4■■□□□ 1.02
XRCC1-208ENST00000598422 LRPPRCP42704 1394 aaKnown RBP21.39■■□□□ 1.02
XRCC1-208ENST00000598422 IFT172Q9UG01 1749 aa21.38■■□□□ 1.01
XRCC1-208ENST00000598422 TMEM132EQ6IEE7 984 aa21.38■■□□□ 1.01
XRCC1-208ENST00000598422 PHLPP1O60346 1717 aa21.38■■□□□ 1.01
XRCC1-208ENST00000598422 ASXL1Q8IXJ9 1541 aa21.37■■□□□ 1.01
XRCC1-208ENST00000598422 AHDC1Q5TGY3 1603 aaPredicted RBP21.37■■□□□ 1.01
XRCC1-208ENST00000598422 NALCNQ8IZF0 1738 aa21.36■■□□□ 1.01
XRCC1-208ENST00000598422 C14orf93Q9H972 538 aaKnown RBP21.36■■□□□ 1.01
XRCC1-208ENST00000598422 NRXN1Q9ULB1 1477 aa21.36■■□□□ 1.01
XRCC1-208ENST00000598422 TECPR2O15040 1411 aa21.36■■□□□ 1.01
XRCC1-208ENST00000598422 YTHDC2Q9H6S0 1430 aaKnown RBP21.35■■□□□ 1.01
XRCC1-208ENST00000598422 ABCC11Q96J66 1382 aa21.35■■□□□ 1.01
XRCC1-208ENST00000598422 CFAP70Q5T0N1 1121 aa21.34■■□□□ 1.01
XRCC1-208ENST00000598422 COL16A1Q07092 1604 aaPredicted RBP21.33■■□□□ 1.01
XRCC1-208ENST00000598422 C1orf167Q5SNV9 1468 aa21.33■■□□□ 1.01
XRCC1-208ENST00000598422 DHX57Q6P158 1386 aaKnown RBP21.33■■□□□ 1
XRCC1-208ENST00000598422 DCAF11Q8TEB1 546 aa21.32■■□□□ 1
XRCC1-208ENST00000598422 KDM2AQ9Y2K7 1162 aa21.32■■□□□ 1
XRCC1-208ENST00000598422 WAPLQ7Z5K2 1190 aa21.31■■□□□ 1
XRCC1-208ENST00000598422 LAMC1P11047 1609 aa21.3■■□□□ 1
XRCC1-208ENST00000598422 STAC3Q96MF2 364 aa21.3■■□□□ 1
XRCC1-208ENST00000598422 SPATA31A6Q5VVP1 1343 aa21.29■■□□□ 1
XRCC1-208ENST00000598422 SOCS7O14512 581 aa21.29■■□□□ 1
XRCC1-208ENST00000598422 CDC42BPGQ6DT37 1551 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms