RNA–Protein interactions for RNA: ENST00000598364.1

SYMPK-211, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-211ENST00000598364 UPF1Q92900 1129 aaKnown RBP eCLIP23.19■■□□□ 1.3
SYMPK-211ENST00000598364 ZFYVE9O95405 1425 aa23.18■■□□□ 1.3
SYMPK-211ENST00000598364 SLC52A1Q9NWF4 448 aa23.18■■□□□ 1.3
SYMPK-211ENST00000598364 PTPN23Q9H3S7 1636 aa23.17■■□□□ 1.3
SYMPK-211ENST00000598364 PLEKHG1Q9ULL1 1385 aa23.15■■□□□ 1.3
SYMPK-211ENST00000598364 CHD2O14647 1828 aaKnown RBP23.15■■□□□ 1.3
SYMPK-211ENST00000598364 BCANQ96GW7 911 aa23.15■■□□□ 1.3
SYMPK-211ENST00000598364 CHIC2Q9UKJ5 165 aa23.14■■□□□ 1.29
SYMPK-211ENST00000598364 FGD6Q6ZV73 1430 aa23.14■■□□□ 1.29
SYMPK-211ENST00000598364 SPATA31A6Q5VVP1 1343 aa23.13■■□□□ 1.29
SYMPK-211ENST00000598364 NCOA3Q9Y6Q9 1424 aa23.12■■□□□ 1.29
SYMPK-211ENST00000598364 ANKRD30AQ9BXX3 1397 aa23.12■■□□□ 1.29
SYMPK-211ENST00000598364 ZNF772Q68DY9 489 aaPredicted RBP23.11■■□□□ 1.29
SYMPK-211ENST00000598364 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
SYMPK-211ENST00000598364 TRIM52Q96A61 297 aa23.1■■□□□ 1.29
SYMPK-211ENST00000598364 TBX22Q9Y458 520 aa23.1■■□□□ 1.29
SYMPK-211ENST00000598364 RIMS2Q9UQ26 1411 aa23.09■■□□□ 1.29
SYMPK-211ENST00000598364 AHDC1Q5TGY3 1603 aaPredicted RBP23.08■■□□□ 1.29
SYMPK-211ENST00000598364 RPRD2Q5VT52 1461 aaKnown RBP23.07■■□□□ 1.28
SYMPK-211ENST00000598364 MYO5BQ9ULV0 1848 aa23.06■■□□□ 1.28
SYMPK-211ENST00000598364 MEX3CQ5U5Q3 659 aaKnown RBP23.06■■□□□ 1.28
SYMPK-211ENST00000598364 ADAMTS13Q76LX8 1427 aa23.06■■□□□ 1.28
SYMPK-211ENST00000598364 TMEM131LA2VDJ0 1609 aa23.05■■□□□ 1.28
SYMPK-211ENST00000598364 SHPRHQ149N8 1683 aa23.05■■□□□ 1.28
SYMPK-211ENST00000598364 C19orf44Q9H6X5 657 aa23.04■■□□□ 1.28
SYMPK-211ENST00000598364 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.04■■□□□ 1.28
SYMPK-211ENST00000598364 SRCAPQ6ZRS2 3230 aa23.04■■□□□ 1.28
SYMPK-211ENST00000598364 PPP1R15AO75807 674 aaPredicted RBP23.03■■□□□ 1.28
SYMPK-211ENST00000598364 RXRBP28702 533 aa23.03■■□□□ 1.28
SYMPK-211ENST00000598364 CADPS2Q86UW7 1296 aa23.03■■□□□ 1.28
SYMPK-211ENST00000598364 ADGRL2O95490 1459 aa23.03■■□□□ 1.28
SYMPK-211ENST00000598364 GCC2Q8IWJ2 1684 aa23.03■■□□□ 1.28
SYMPK-211ENST00000598364 DIP2AQ14689 1571 aa23.02■■□□□ 1.28
SYMPK-211ENST00000598364 HDGFP51858 240 aaKnown RBP23.02■■□□□ 1.28
SYMPK-211ENST00000598364 BRINP3Q76B58 766 aa23■■□□□ 1.27
SYMPK-211ENST00000598364 C14orf37Q86TY3 774 aa23■■□□□ 1.27
SYMPK-211ENST00000598364 CDK12Q9NYV4 1490 aaPredicted RBP22.99■■□□□ 1.27
SYMPK-211ENST00000598364 ATF3P18847 181 aa22.99■■□□□ 1.27
SYMPK-211ENST00000598364 NUTM2DQ5VT03 806 aaPredicted RBP22.99■■□□□ 1.27
SYMPK-211ENST00000598364 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.98■■□□□ 1.27
SYMPK-211ENST00000598364 PIK3R4Q99570 1358 aa22.98■■□□□ 1.27
SYMPK-211ENST00000598364 PTPRUQ92729 1446 aa22.97■■□□□ 1.27
SYMPK-211ENST00000598364 ANKRD50Q9ULJ7 1429 aa22.97■■□□□ 1.27
SYMPK-211ENST00000598364 NUTM2BA6NNL0 878 aaPredicted RBP22.95■■□□□ 1.26
SYMPK-211ENST00000598364 NUTM2EB1AL46 878 aaPredicted RBP22.95■■□□□ 1.26
SYMPK-211ENST00000598364 NUTM2AQ8IVF1 878 aaPredicted RBP22.95■■□□□ 1.26
SYMPK-211ENST00000598364 AFF2P51816 1311 aa22.94■■□□□ 1.26
SYMPK-211ENST00000598364 AMOTL2Q9Y2J4 779 aa22.94■■□□□ 1.26
SYMPK-211ENST00000598364 CHGAP10645 457 aaKnown RBP22.93■■□□□ 1.26
SYMPK-211ENST00000598364 SETD5Q9C0A6 1442 aa22.92■■□□□ 1.26
SYMPK-211ENST00000598364 ASXL1Q8IXJ9 1541 aa22.9■■□□□ 1.26
SYMPK-211ENST00000598364 APLP2Q06481 763 aa22.89■■□□□ 1.25
SYMPK-211ENST00000598364 RGS12O14924 1447 aa22.89■■□□□ 1.25
SYMPK-211ENST00000598364 DCCP43146 1447 aa22.89■■□□□ 1.25
SYMPK-211ENST00000598364 TRPM2O94759 1503 aa22.88■■□□□ 1.25
SYMPK-211ENST00000598364 MST1RQ04912 1400 aa22.88■■□□□ 1.25
SYMPK-211ENST00000598364 E9PCH4 1651 aa22.87■■□□□ 1.25
SYMPK-211ENST00000598364 UNC13BO14795 1591 aa22.86■■□□□ 1.25
SYMPK-211ENST00000598364 NHSL1Q5SYE7 1610 aa22.85■■□□□ 1.25
SYMPK-211ENST00000598364 QTRT2Q9H974 415 aaKnown RBP22.84■■□□□ 1.25
SYMPK-211ENST00000598364 NRXN3Q9Y4C0 1643 aa22.83■■□□□ 1.25
SYMPK-211ENST00000598364 XRN1Q8IZH2 1706 aaKnown RBP22.83■■□□□ 1.25
SYMPK-211ENST00000598364 RBM6P78332 1123 aaKnown RBP22.83■■□□□ 1.25
SYMPK-211ENST00000598364 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.25
SYMPK-211ENST00000598364 DDX17Q92841 729 aaKnown RBP22.83■■□□□ 1.25
SYMPK-211ENST00000598364 LRRC59Q96AG4 307 aaKnown RBP22.83■■□□□ 1.25
SYMPK-211ENST00000598364 C8orf37Q96NL8 207 aa22.83■■□□□ 1.25
SYMPK-211ENST00000598364 PNPLA6Q8IY17 1366 aa22.82■■□□□ 1.24
SYMPK-211ENST00000598364 METP08581 1390 aa22.78■■□□□ 1.24
SYMPK-211ENST00000598364 SETBP1Q9Y6X0 1596 aa22.78■■□□□ 1.24
SYMPK-211ENST00000598364 IQGAP3Q86VI3 1631 aa22.77■■□□□ 1.24
SYMPK-211ENST00000598364 ADGRL3Q9HAR2 1447 aa22.74■■□□□ 1.23
SYMPK-211ENST00000598364 ADAMTS2O95450 1211 aa22.72■■□□□ 1.23
SYMPK-211ENST00000598364 NGLY1Q96IV0 654 aa22.71■■□□□ 1.23
SYMPK-211ENST00000598364 NUP155O75694 1391 aa22.71■■□□□ 1.23
SYMPK-211ENST00000598364 ROCK1Q13464 1354 aa22.7■■□□□ 1.22
SYMPK-211ENST00000598364 EP400Q96L91 3159 aa22.7■■□□□ 1.22
SYMPK-211ENST00000598364 NALCNQ8IZF0 1738 aa22.69■■□□□ 1.22
SYMPK-211ENST00000598364 C1orf167Q5SNV9 1468 aa22.69■■□□□ 1.22
SYMPK-211ENST00000598364 ATAD2Q6PL18 1390 aa22.69■■□□□ 1.22
SYMPK-211ENST00000598364 LAMC1P11047 1609 aa22.68■■□□□ 1.22
SYMPK-211ENST00000598364 SOS2Q07890 1332 aaPredicted RBP22.67■■□□□ 1.22
SYMPK-211ENST00000598364 FNBP4Q8N3X1 1017 aaPredicted RBP22.66■■□□□ 1.22
SYMPK-211ENST00000598364 USP21Q9UK80 565 aa22.66■■□□□ 1.22
SYMPK-211ENST00000598364 ZNF326Q5BKZ1 582 aaKnown RBP22.64■■□□□ 1.21
SYMPK-211ENST00000598364 ORAI2Q96SN7 254 aa22.64■■□□□ 1.21
SYMPK-211ENST00000598364 TRPC5Q9UL62 973 aaPredicted RBP22.64■■□□□ 1.21
SYMPK-211ENST00000598364 ATRNO75882 1429 aa22.63■■□□□ 1.21
SYMPK-211ENST00000598364 NEXMIFQ5QGS0 1516 aa22.62■■□□□ 1.21
SYMPK-211ENST00000598364 PTCH1Q13635 1447 aa22.61■■□□□ 1.21
SYMPK-211ENST00000598364 SPHKAPQ2M3C7 1700 aa22.6■■□□□ 1.21
SYMPK-211ENST00000598364 ZRANB1Q9UGI0 708 aa22.6■■□□□ 1.21
SYMPK-211ENST00000598364 ROBO2Q9HCK4 1378 aa22.59■■□□□ 1.21
SYMPK-211ENST00000598364 BCL9LQ86UU0 1499 aa22.56■■□□□ 1.2
SYMPK-211ENST00000598364 COL22A1Q8NFW1 1626 aaPredicted RBP22.56■■□□□ 1.2
SYMPK-211ENST00000598364 MYOM2P54296 1465 aa22.55■■□□□ 1.2
SYMPK-211ENST00000598364 CLTCL1P53675 1640 aa22.55■■□□□ 1.2
SYMPK-211ENST00000598364 PRAG1Q86YV5 1406 aa22.54■■□□□ 1.2
SYMPK-211ENST00000598364 CCDC125Q86Z20 511 aa22.53■■□□□ 1.2
SYMPK-211ENST00000598364 FOXD1Q16676 465 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms