RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, human

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYMPK-208	ENST00000598059	KCNA6	P17658	529 aa		32.6	■■■□□ 2.81
SYMPK-208	ENST00000598059	NUP155	O75694	1391 aa		32.58	■■■□□ 2.81
SYMPK-208	ENST00000598059	RIMS2	Q9UQ26	1411 aa		32.56	■■■□□ 2.8
SYMPK-208	ENST00000598059	SOCS7	O14512	581 aa		32.55	■■■□□ 2.8
SYMPK-208	ENST00000598059	BCAN	Q96GW7	911 aa		32.55	■■■□□ 2.8
SYMPK-208	ENST00000598059	TMEM94	Q12767	1356 aa		32.54	■■■□□ 2.8
SYMPK-208	ENST00000598059	MED1	Q15648	1581 aa	Predicted RBP	32.53	■■■□□ 2.8
SYMPK-208	ENST00000598059	HDGF	P51858	240 aa	Known RBP	32.53	■■■□□ 2.8
SYMPK-208	ENST00000598059	PLEKHG1	Q9ULL1	1385 aa		32.53	■■■□□ 2.8
SYMPK-208	ENST00000598059	NWD1	Q149M9	1564 aa		32.51	■■■□□ 2.79
SYMPK-208	ENST00000598059	PPP1R15A	O75807	674 aa	Predicted RBP	32.51	■■■□□ 2.79
SYMPK-208	ENST00000598059	CHGA	P10645	457 aa	Known RBP	32.51	■■■□□ 2.79
SYMPK-208	ENST00000598059	SENP3	Q9H4L4	574 aa	Predicted RBP	32.5	■■■□□ 2.79
SYMPK-208	ENST00000598059	PROSER2	Q86WR7	435 aa	Predicted RBP	32.49	■■■□□ 2.79
SYMPK-208	ENST00000598059	RRBP1	Q9P2E9	1410 aa	Known RBP	32.49	■■■□□ 2.79
SYMPK-208	ENST00000598059	NKTR	P30414	1462 aa	Known RBP	32.48	■■■□□ 2.79
SYMPK-208	ENST00000598059	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.46	■■■□□ 2.79
SYMPK-208	ENST00000598059	RBM33	Q96EV2	1170 aa	Known RBP	32.46	■■■□□ 2.79
SYMPK-208	ENST00000598059	CHD2	O14647	1828 aa	Known RBP	32.45	■■■□□ 2.79
SYMPK-208	ENST00000598059	FAM135B	Q49AJ0	1406 aa		32.42	■■■□□ 2.78
SYMPK-208	ENST00000598059	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.41	■■■□□ 2.78
SYMPK-208	ENST00000598059	TBX22	Q9Y458	520 aa		32.41	■■■□□ 2.78
SYMPK-208	ENST00000598059	SPHKAP	Q2M3C7	1700 aa		32.38	■■■□□ 2.77
SYMPK-208	ENST00000598059	ADAMTS13	Q76LX8	1427 aa		32.37	■■■□□ 2.77
SYMPK-208	ENST00000598059	NAIP	Q13075	1403 aa		32.34	■■■□□ 2.77
SYMPK-208	ENST00000598059	MSH6	P52701	1360 aa		32.34	■■■□□ 2.77
SYMPK-208	ENST00000598059	DIP2A	Q14689	1571 aa		32.33	■■■□□ 2.77
SYMPK-208	ENST00000598059	ROBO1	Q9Y6N7	1651 aa		32.32	■■■□□ 2.76
SYMPK-208	ENST00000598059	PHF23	Q9BUL5	403 aa	Predicted RBP	32.3	■■■□□ 2.76
SYMPK-208	ENST00000598059	PIK3R4	Q99570	1358 aa		32.29	■■■□□ 2.76
SYMPK-208	ENST00000598059	NCOA3	Q9Y6Q9	1424 aa		32.26	■■■□□ 2.76
SYMPK-208	ENST00000598059	SLAIN2	Q9P270	581 aa		32.26	■■■□□ 2.75
SYMPK-208	ENST00000598059	TRPM2	O94759	1503 aa		32.24	■■■□□ 2.75
SYMPK-208	ENST00000598059	HFM1	A2PYH4	1435 aa		32.23	■■■□□ 2.75
SYMPK-208	ENST00000598059	ZNF326	Q5BKZ1	582 aa	Known RBP	32.22	■■■□□ 2.75
SYMPK-208	ENST00000598059	CLTCL1	P53675	1640 aa		32.22	■■■□□ 2.75
SYMPK-208	ENST00000598059	NRXN3	Q9Y4C0	1643 aa		32.21	■■■□□ 2.75
SYMPK-208	ENST00000598059	SETBP1	Q9Y6X0	1596 aa		32.19	■■■□□ 2.74
SYMPK-208	ENST00000598059	PTPRU	Q92729	1446 aa		32.19	■■■□□ 2.74
SYMPK-208	ENST00000598059	AMOTL2	Q9Y2J4	779 aa		32.19	■■■□□ 2.74
SYMPK-208	ENST00000598059	C14orf37	Q86TY3	774 aa		32.18	■■■□□ 2.74
SYMPK-208	ENST00000598059	TRIM52	Q96A61	297 aa		32.16	■■■□□ 2.74
SYMPK-208	ENST00000598059	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.15	■■■□□ 2.74
SYMPK-208	ENST00000598059	KIF1B	O60333	1816 aa		32.15	■■■□□ 2.74
SYMPK-208	ENST00000598059	C19orf44	Q9H6X5	657 aa		32.15	■■■□□ 2.74
SYMPK-208	ENST00000598059	NEXMIF	Q5QGS0	1516 aa		32.14	■■■□□ 2.74
SYMPK-208	ENST00000598059	PHLPP1	O60346	1717 aa		32.12	■■■□□ 2.73
SYMPK-208	ENST00000598059	CADPS2	Q86UW7	1296 aa		32.12	■■■□□ 2.73
SYMPK-208	ENST00000598059	XRN1	Q8IZH2	1706 aa	Known RBP	32.11	■■■□□ 2.73
SYMPK-208	ENST00000598059	RGS17	Q9UGC6	210 aa	Predicted RBP	32.1	■■■□□ 2.73
SYMPK-208	ENST00000598059	MET	P08581	1390 aa		32.09	■■■□□ 2.73
SYMPK-208	ENST00000598059	ATF3	P18847	181 aa		32.09	■■■□□ 2.73
SYMPK-208	ENST00000598059	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.08	■■■□□ 2.73
SYMPK-208	ENST00000598059	COL16A1	Q07092	1604 aa	Predicted RBP	32.03	■■■□□ 2.72
SYMPK-208	ENST00000598059	JCAD	Q9P266	1359 aa		32.02	■■■□□ 2.72
SYMPK-208	ENST00000598059	DCC	P43146	1447 aa		32.01	■■■□□ 2.72
SYMPK-208	ENST00000598059	VGF	O15240	615 aa	Predicted RBP	31.98	■■■□□ 2.71
SYMPK-208	ENST00000598059	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.97	■■■□□ 2.71
SYMPK-208	ENST00000598059	BRINP3	Q76B58	766 aa		31.95	■■■□□ 2.71
SYMPK-208	ENST00000598059	RPGRIP1L	Q68CZ1	1315 aa		31.95	■■■□□ 2.7
SYMPK-208	ENST00000598059	FOXD1	Q16676	465 aa		31.94	■■■□□ 2.7
SYMPK-208	ENST00000598059	SETD1A	O15047	1707 aa	Known RBP	31.93	■■■□□ 2.7
SYMPK-208	ENST00000598059	PPL	O60437	1756 aa		31.91	■■■□□ 2.7
SYMPK-208	ENST00000598059	MST1R	Q04912	1400 aa		31.91	■■■□□ 2.7
SYMPK-208	ENST00000598059	ADGRL3	Q9HAR2	1447 aa		31.91	■■■□□ 2.7
SYMPK-208	ENST00000598059	POTEA	Q6S8J7	498 aa		31.9	■■■□□ 2.7
SYMPK-208	ENST00000598059	ASXL1	Q8IXJ9	1541 aa		31.88	■■■□□ 2.69
SYMPK-208	ENST00000598059	NALCN	Q8IZF0	1738 aa		31.88	■■■□□ 2.69
SYMPK-208	ENST00000598059	SPATA31A6	Q5VVP1	1343 aa		31.87	■■■□□ 2.69
SYMPK-208	ENST00000598059	SHPRH	Q149N8	1683 aa		31.86	■■■□□ 2.69
SYMPK-208	ENST00000598059	MPHOSPH9	Q99550	1183 aa		31.86	■■■□□ 2.69
SYMPK-208	ENST00000598059	PTCH1	Q13635	1447 aa		31.85	■■■□□ 2.69
SYMPK-208	ENST00000598059	CCDC144A	A2RUR9	1427 aa		31.84	■■■□□ 2.69
SYMPK-208	ENST00000598059	LRP6	O75581	1613 aa		31.83	■■■□□ 2.69
SYMPK-208	ENST00000598059	ROBO2	Q9HCK4	1378 aa		31.82	■■■□□ 2.69
SYMPK-208	ENST00000598059	PRAG1	Q86YV5	1406 aa		31.82	■■■□□ 2.68
SYMPK-208	ENST00000598059	NHSL1	Q5SYE7	1610 aa		31.81	■■■□□ 2.68
SYMPK-208	ENST00000598059	SPATA31E1	Q6ZUB1	1445 aa		31.78	■■■□□ 2.68
SYMPK-208	ENST00000598059	SETD5	Q9C0A6	1442 aa		31.77	■■■□□ 2.68
SYMPK-208	ENST00000598059	RGL3	Q3MIN7	710 aa		31.76	■■■□□ 2.67
SYMPK-208	ENST00000598059	ADGRF5	Q8IZF2	1346 aa		31.75	■■■□□ 2.67
SYMPK-208	ENST00000598059	MEX3C	Q5U5Q3	659 aa	Known RBP	31.75	■■■□□ 2.67
SYMPK-208	ENST00000598059	C1orf167	Q5SNV9	1468 aa		31.74	■■■□□ 2.67
SYMPK-208	ENST00000598059	ACIN1	Q9UKV3	1341 aa	Known RBP	31.74	■■■□□ 2.67
SYMPK-208	ENST00000598059	IFT172	Q9UG01	1749 aa		31.73	■■■□□ 2.67
SYMPK-208	ENST00000598059	DDX17	Q92841	729 aa	Known RBP	31.72	■■■□□ 2.67
SYMPK-208	ENST00000598059	ANKRD30B	Q9BXX2	1392 aa		31.71	■■■□□ 2.67
SYMPK-208	ENST00000598059	LRRC59	Q96AG4	307 aa	Known RBP	31.71	■■■□□ 2.67
SYMPK-208	ENST00000598059	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.67	■■■□□ 2.66
SYMPK-208	ENST00000598059	NUTM2E	B1AL46	878 aa	Predicted RBP	31.67	■■■□□ 2.66
SYMPK-208	ENST00000598059	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.67	■■■□□ 2.66
SYMPK-208	ENST00000598059	ZNF772	Q68DY9	489 aa	Predicted RBP	31.66	■■■□□ 2.66
SYMPK-208	ENST00000598059	LAMC1	P11047	1609 aa		31.65	■■■□□ 2.66
SYMPK-208	ENST00000598059	ORAI2	Q96SN7	254 aa		31.64	■■■□□ 2.66
SYMPK-208	ENST00000598059	PIK3C2G	O75747	1445 aa		31.63	■■■□□ 2.65
SYMPK-208	ENST00000598059	TECPR2	O15040	1411 aa		31.62	■■■□□ 2.65
SYMPK-208	ENST00000598059	PNPLA6	Q8IY17	1366 aa		31.62	■■■□□ 2.65
SYMPK-208	ENST00000598059	STK26	Q9P289	416 aa		31.61	■■■□□ 2.65
SYMPK-208	ENST00000598059	LRPPRC	P42704	1394 aa	Known RBP	31.6	■■■□□ 2.65
SYMPK-208	ENST00000598059	RAB3GAP2	Q9H2M9	1393 aa		31.6	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms