RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 NKTRP30414 1462 aaKnown RBP26.22■■□□□ 1.79
PNKP-210ENST00000597965 PPP1R15AO75807 674 aaPredicted RBP26.17■■□□□ 1.78
PNKP-210ENST00000597965 GCC2Q8IWJ2 1684 aa26.17■■□□□ 1.78
PNKP-210ENST00000597965 NWD1Q149M9 1564 aa26.16■■□□□ 1.78
PNKP-210ENST00000597965 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.15■■□□□ 1.78
PNKP-210ENST00000597965 MSH6P52701 1360 aa26.15■■□□□ 1.78
PNKP-210ENST00000597965 ROCK1Q13464 1354 aa26.15■■□□□ 1.78
PNKP-210ENST00000597965 PLEKHG1Q9ULL1 1385 aa26.15■■□□□ 1.78
PNKP-210ENST00000597965 UNC13BO14795 1591 aa26.14■■□□□ 1.78
PNKP-210ENST00000597965 ZFYVE9O95405 1425 aa26.13■■□□□ 1.77
PNKP-210ENST00000597965 RIMS2Q9UQ26 1411 aa26.12■■□□□ 1.77
PNKP-210ENST00000597965 TMEM131LA2VDJ0 1609 aa26.1■■□□□ 1.77
PNKP-210ENST00000597965 ROBO1Q9Y6N7 1651 aa26.09■■□□□ 1.77
PNKP-210ENST00000597965 TBX22Q9Y458 520 aa26.08■■□□□ 1.77
PNKP-210ENST00000597965 MYO5BQ9ULV0 1848 aa26.08■■□□□ 1.77
PNKP-210ENST00000597965 CHD2O14647 1828 aaKnown RBP26.07■■□□□ 1.76
PNKP-210ENST00000597965 NCOA3Q9Y6Q9 1424 aa26.07■■□□□ 1.76
PNKP-210ENST00000597965 CHGAP10645 457 aaKnown RBP26.07■■□□□ 1.76
PNKP-210ENST00000597965 RBM33Q96EV2 1170 aaKnown RBP26.05■■□□□ 1.76
PNKP-210ENST00000597965 SLAIN2Q9P270 581 aa26.05■■□□□ 1.76
PNKP-210ENST00000597965 IQGAP3Q86VI3 1631 aa26.05■■□□□ 1.76
PNKP-210ENST00000597965 E9PCH4 1651 aa26.04■■□□□ 1.76
PNKP-210ENST00000597965 DIP2AQ14689 1571 aa26.03■■□□□ 1.76
PNKP-210ENST00000597965 PIK3R4Q99570 1358 aa26.02■■□□□ 1.76
PNKP-210ENST00000597965 NUP155O75694 1391 aa26.01■■□□□ 1.75
PNKP-210ENST00000597965 C14orf37Q86TY3 774 aa25.99■■□□□ 1.75
PNKP-210ENST00000597965 RGS17Q9UGC6 210 aaPredicted RBP25.99■■□□□ 1.75
PNKP-210ENST00000597965 CADPS2Q86UW7 1296 aa25.96■■□□□ 1.75
PNKP-210ENST00000597965 JCADQ9P266 1359 aa25.95■■□□□ 1.75
PNKP-210ENST00000597965 PHLPP1O60346 1717 aa25.95■■□□□ 1.74
PNKP-210ENST00000597965 ITGAEP38570 1179 aa25.94■■□□□ 1.74
PNKP-210ENST00000597965 C19orf44Q9H6X5 657 aa25.94■■□□□ 1.74
PNKP-210ENST00000597965 ADAMTS13Q76LX8 1427 aa25.94■■□□□ 1.74
PNKP-210ENST00000597965 TRPM2O94759 1503 aa25.93■■□□□ 1.74
PNKP-210ENST00000597965 ATF3P18847 181 aa25.93■■□□□ 1.74
PNKP-210ENST00000597965 NUTM2DQ5VT03 806 aaPredicted RBP25.91■■□□□ 1.74
PNKP-210ENST00000597965 AMOTL2Q9Y2J4 779 aa25.87■■□□□ 1.73
PNKP-210ENST00000597965 SPATA31A6Q5VVP1 1343 aa25.86■■□□□ 1.73
PNKP-210ENST00000597965 SPHKAPQ2M3C7 1700 aa25.85■■□□□ 1.73
PNKP-210ENST00000597965 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.85■■□□□ 1.73
PNKP-210ENST00000597965 POTEAQ6S8J7 498 aa25.85■■□□□ 1.73
PNKP-210ENST00000597965 ZNF326Q5BKZ1 582 aaKnown RBP25.84■■□□□ 1.73
PNKP-210ENST00000597965 DCCP43146 1447 aa25.83■■□□□ 1.73
PNKP-210ENST00000597965 COL16A1Q07092 1604 aaPredicted RBP25.83■■□□□ 1.73
PNKP-210ENST00000597965 SETBP1Q9Y6X0 1596 aa25.82■■□□□ 1.72
PNKP-210ENST00000597965 AHDC1Q5TGY3 1603 aaPredicted RBP25.81■■□□□ 1.72
PNKP-210ENST00000597965 MEX3CQ5U5Q3 659 aaKnown RBP25.78■■□□□ 1.72
PNKP-210ENST00000597965 PTPRUQ92729 1446 aa25.77■■□□□ 1.72
PNKP-210ENST00000597965 ZNF772Q68DY9 489 aaPredicted RBP25.76■■□□□ 1.71
PNKP-210ENST00000597965 PPARGC1BQ86YN6 1023 aaKnown RBP25.75■■□□□ 1.71
PNKP-210ENST00000597965 XRN1Q8IZH2 1706 aaKnown RBP25.74■■□□□ 1.71
PNKP-210ENST00000597965 SHPRHQ149N8 1683 aa25.74■■□□□ 1.71
PNKP-210ENST00000597965 NRXN3Q9Y4C0 1643 aa25.74■■□□□ 1.71
PNKP-210ENST00000597965 RRBP1Q9P2E9 1410 aaKnown RBP25.73■■□□□ 1.71
PNKP-210ENST00000597965 BRINP3Q76B58 766 aa25.73■■□□□ 1.71
PNKP-210ENST00000597965 KIF1BO60333 1816 aa25.71■■□□□ 1.71
PNKP-210ENST00000597965 METP08581 1390 aa25.69■■□□□ 1.7
PNKP-210ENST00000597965 NEXMIFQ5QGS0 1516 aa25.68■■□□□ 1.7
PNKP-210ENST00000597965 CLTCL1P53675 1640 aa25.68■■□□□ 1.7
PNKP-210ENST00000597965 VGFO15240 615 aaPredicted RBP25.68■■□□□ 1.7
PNKP-210ENST00000597965 NAIPQ13075 1403 aa25.68■■□□□ 1.7
PNKP-210ENST00000597965 ASXL1Q8IXJ9 1541 aa25.68■■□□□ 1.7
PNKP-210ENST00000597965 LRP6O75581 1613 aa25.67■■□□□ 1.7
PNKP-210ENST00000597965 MST1RQ04912 1400 aa25.66■■□□□ 1.7
PNKP-210ENST00000597965 ADGRL3Q9HAR2 1447 aa25.66■■□□□ 1.7
PNKP-210ENST00000597965 LRRC59Q96AG4 307 aaKnown RBP25.66■■□□□ 1.7
PNKP-210ENST00000597965 SETD5Q9C0A6 1442 aa25.65■■□□□ 1.7
PNKP-210ENST00000597965 TRIM52Q96A61 297 aa25.63■■□□□ 1.69
PNKP-210ENST00000597965 RPGRIP1LQ68CZ1 1315 aa25.63■■□□□ 1.69
PNKP-210ENST00000597965 NHSL1Q5SYE7 1610 aa25.61■■□□□ 1.69
PNKP-210ENST00000597965 HFM1A2PYH4 1435 aa25.61■■□□□ 1.69
PNKP-210ENST00000597965 NUTM2BA6NNL0 878 aaPredicted RBP25.59■■□□□ 1.69
PNKP-210ENST00000597965 NUTM2EB1AL46 878 aaPredicted RBP25.59■■□□□ 1.69
PNKP-210ENST00000597965 RXRBP28702 533 aa25.59■■□□□ 1.69
PNKP-210ENST00000597965 NUTM2AQ8IVF1 878 aaPredicted RBP25.59■■□□□ 1.69
PNKP-210ENST00000597965 PTCH1Q13635 1447 aa25.59■■□□□ 1.69
PNKP-210ENST00000597965 SETD1AO15047 1707 aaKnown RBP25.58■■□□□ 1.69
PNKP-210ENST00000597965 SLC4A1APQ9BWU0 796 aaKnown RBP25.58■■□□□ 1.69
PNKP-210ENST00000597965 NALCNQ8IZF0 1738 aa25.57■■□□□ 1.68
PNKP-210ENST00000597965 CDK12Q9NYV4 1490 aaPredicted RBP25.53■■□□□ 1.68
PNKP-210ENST00000597965 PRAG1Q86YV5 1406 aa25.53■■□□□ 1.68
PNKP-210ENST00000597965 AFF2P51816 1311 aa25.52■■□□□ 1.68
PNKP-210ENST00000597965 C1orf167Q5SNV9 1468 aa25.52■■□□□ 1.68
PNKP-210ENST00000597965 PNPLA6Q8IY17 1366 aa25.49■■□□□ 1.67
PNKP-210ENST00000597965 ROBO2Q9HCK4 1378 aa25.47■■□□□ 1.67
PNKP-210ENST00000597965 PPLO60437 1756 aa25.47■■□□□ 1.67
PNKP-210ENST00000597965 LAMC1P11047 1609 aa25.47■■□□□ 1.67
PNKP-210ENST00000597965 UPF1Q92900 1129 aaKnown RBP eCLIP25.46■■□□□ 1.67
PNKP-210ENST00000597965 C8orf37Q96NL8 207 aa25.46■■□□□ 1.67
PNKP-210ENST00000597965 DDX17Q92841 729 aaKnown RBP25.44■■□□□ 1.66
PNKP-210ENST00000597965 CCDC144AA2RUR9 1427 aa25.44■■□□□ 1.66
PNKP-210ENST00000597965 SOS2Q07890 1332 aaPredicted RBP25.43■■□□□ 1.66
PNKP-210ENST00000597965 ACIN1Q9UKV3 1341 aaKnown RBP25.43■■□□□ 1.66
PNKP-210ENST00000597965 RBM6P78332 1123 aaKnown RBP25.43■■□□□ 1.66
PNKP-210ENST00000597965 NGLY1Q96IV0 654 aa25.42■■□□□ 1.66
PNKP-210ENST00000597965 QTRT2Q9H974 415 aaKnown RBP25.42■■□□□ 1.66
PNKP-210ENST00000597965 ORAI2Q96SN7 254 aa25.4■■□□□ 1.66
PNKP-210ENST00000597965 ANKRD30BQ9BXX2 1392 aa25.4■■□□□ 1.66
PNKP-210ENST00000597965 NPHP3Q7Z494 1330 aa25.38■■□□□ 1.65
PNKP-210ENST00000597965 ADAMTS2O95450 1211 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 1046.2 ms