RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 EID1Q9Y6B2 187 aa20.19■□□□□ 0.82
PRKD2-208ENST00000597390 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
PRKD2-208ENST00000597390 DHX57Q6P158 1386 aaKnown RBP20.16■□□□□ 0.82
PRKD2-208ENST00000597390 STRCP1A6NGW2 1772 aa20.15■□□□□ 0.82
PRKD2-208ENST00000597390 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
PRKD2-208ENST00000597390 TMEM131LA2VDJ0 1609 aa20.11■□□□□ 0.81
PRKD2-208ENST00000597390 FOXD1Q16676 465 aa20.08■□□□□ 0.81
PRKD2-208ENST00000597390 MED1Q15648 1581 aaPredicted RBP20.08■□□□□ 0.81
PRKD2-208ENST00000597390 LRRC7Q96NW7 1537 aa20.08■□□□□ 0.8
PRKD2-208ENST00000597390 SPHKAPQ2M3C7 1700 aa20.07■□□□□ 0.8
PRKD2-208ENST00000597390 ZFYVE9O95405 1425 aa20.06■□□□□ 0.8
PRKD2-208ENST00000597390 TOM1O60784 492 aa20.06■□□□□ 0.8
PRKD2-208ENST00000597390 HSPA1LP34931 641 aa20.05■□□□□ 0.8
PRKD2-208ENST00000597390 RIMS2Q9UQ26 1411 aa20.04■□□□□ 0.8
PRKD2-208ENST00000597390 HDGFP51858 240 aaKnown RBP20.04■□□□□ 0.8
PRKD2-208ENST00000597390 ANKRD30BQ9BXX2 1392 aa20.03■□□□□ 0.8
PRKD2-208ENST00000597390 CHGAP10645 457 aaKnown RBP20.03■□□□□ 0.8
PRKD2-208ENST00000597390 TRPM2O94759 1503 aa20.03■□□□□ 0.8
PRKD2-208ENST00000597390 SLC26A8Q96RN1 970 aa20.01■□□□□ 0.79
PRKD2-208ENST00000597390 PLEKHG1Q9ULL1 1385 aa20.01■□□□□ 0.79
PRKD2-208ENST00000597390 XIRP1Q702N8 1843 aaKnown RBP20■□□□□ 0.79
PRKD2-208ENST00000597390 ABCF1Q8NE71 845 aaKnown RBP eCLIP20■□□□□ 0.79
PRKD2-208ENST00000597390 ALKQ9UM73 1620 aa19.99■□□□□ 0.79
PRKD2-208ENST00000597390 PPP1R15AO75807 674 aaPredicted RBP19.99■□□□□ 0.79
PRKD2-208ENST00000597390 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
PRKD2-208ENST00000597390 PIP4K2BP78356 416 aa19.98■□□□□ 0.79
PRKD2-208ENST00000597390 BCANQ96GW7 911 aa19.98■□□□□ 0.79
PRKD2-208ENST00000597390 NWD1Q149M9 1564 aa19.97■□□□□ 0.79
PRKD2-208ENST00000597390 KCNA6P17658 529 aa19.97■□□□□ 0.79
PRKD2-208ENST00000597390 CLTCL1P53675 1640 aa19.97■□□□□ 0.79
PRKD2-208ENST00000597390 CCER1Q8TC90 406 aaPredicted RBP19.96■□□□□ 0.79
PRKD2-208ENST00000597390 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
PRKD2-208ENST00000597390 CHD2O14647 1828 aaKnown RBP19.95■□□□□ 0.78
PRKD2-208ENST00000597390 CLSPNQ9HAW4 1339 aa19.94■□□□□ 0.78
PRKD2-208ENST00000597390 NKTRP30414 1462 aaKnown RBP19.94■□□□□ 0.78
PRKD2-208ENST00000597390 DIP2AQ14689 1571 aa19.93■□□□□ 0.78
PRKD2-208ENST00000597390 SENP3Q9H4L4 574 aaPredicted RBP19.93■□□□□ 0.78
PRKD2-208ENST00000597390 KIF1BO60333 1816 aa19.92■□□□□ 0.78
PRKD2-208ENST00000597390 CCDC144AA2RUR9 1427 aa19.92■□□□□ 0.78
PRKD2-208ENST00000597390 NUTM2DQ5VT03 806 aaPredicted RBP19.92■□□□□ 0.78
PRKD2-208ENST00000597390 TBX22Q9Y458 520 aa19.92■□□□□ 0.78
PRKD2-208ENST00000597390 TMEM94Q12767 1356 aa19.91■□□□□ 0.78
PRKD2-208ENST00000597390 ADAMTS13Q76LX8 1427 aa19.9■□□□□ 0.78
PRKD2-208ENST00000597390 PROSER2Q86WR7 435 aaPredicted RBP19.9■□□□□ 0.78
PRKD2-208ENST00000597390 SIN3AQ96ST3 1273 aa19.9■□□□□ 0.78
PRKD2-208ENST00000597390 ZNF326Q5BKZ1 582 aaKnown RBP19.88■□□□□ 0.77
PRKD2-208ENST00000597390 PIK3R4Q99570 1358 aa19.87■□□□□ 0.77
PRKD2-208ENST00000597390 SPATA31E1Q6ZUB1 1445 aa19.86■□□□□ 0.77
PRKD2-208ENST00000597390 NRXN3Q9Y4C0 1643 aa19.85■□□□□ 0.77
PRKD2-208ENST00000597390 SETBP1Q9Y6X0 1596 aa19.85■□□□□ 0.77
PRKD2-208ENST00000597390 NEXMIFQ5QGS0 1516 aa19.85■□□□□ 0.77
PRKD2-208ENST00000597390 RBM33Q96EV2 1170 aaKnown RBP19.83■□□□□ 0.77
PRKD2-208ENST00000597390 NEUROD1Q13562 356 aa19.82■□□□□ 0.76
PRKD2-208ENST00000597390 MSH6P52701 1360 aa19.81■□□□□ 0.76
PRKD2-208ENST00000597390 NCOA3Q9Y6Q9 1424 aa19.8■□□□□ 0.76
PRKD2-208ENST00000597390 FAM135BQ49AJ0 1406 aa19.8■□□□□ 0.76
PRKD2-208ENST00000597390 PTPRUQ92729 1446 aa19.78■□□□□ 0.76
PRKD2-208ENST00000597390 XRN1Q8IZH2 1706 aaKnown RBP19.77■□□□□ 0.76
PRKD2-208ENST00000597390 ROBO1Q9Y6N7 1651 aa19.77■□□□□ 0.76
PRKD2-208ENST00000597390 AMOTL2Q9Y2J4 779 aa19.77■□□□□ 0.76
PRKD2-208ENST00000597390 IFT172Q9UG01 1749 aa19.77■□□□□ 0.75
PRKD2-208ENST00000597390 PPLO60437 1756 aa19.76■□□□□ 0.75
PRKD2-208ENST00000597390 RPGRIP1LQ68CZ1 1315 aa19.76■□□□□ 0.75
PRKD2-208ENST00000597390 VGFO15240 615 aaPredicted RBP19.75■□□□□ 0.75
PRKD2-208ENST00000597390 RGL3Q3MIN7 710 aa19.75■□□□□ 0.75
PRKD2-208ENST00000597390 RGS17Q9UGC6 210 aaPredicted RBP19.75■□□□□ 0.75
PRKD2-208ENST00000597390 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.74■□□□□ 0.75
PRKD2-208ENST00000597390 C14orf37Q86TY3 774 aa19.73■□□□□ 0.75
PRKD2-208ENST00000597390 METP08581 1390 aa19.72■□□□□ 0.75
PRKD2-208ENST00000597390 L3MBTL2Q969R5 705 aa19.72■□□□□ 0.75
PRKD2-208ENST00000597390 SLAIN2Q9P270 581 aa19.72■□□□□ 0.75
PRKD2-208ENST00000597390 SETD1AO15047 1707 aaKnown RBP19.72■□□□□ 0.75
PRKD2-208ENST00000597390 TONSLQ96HA7 1378 aa19.71■□□□□ 0.75
PRKD2-208ENST00000597390 C19orf44Q9H6X5 657 aa19.7■□□□□ 0.74
PRKD2-208ENST00000597390 TIMELESSQ9UNS1 1208 aa19.7■□□□□ 0.74
PRKD2-208ENST00000597390 CADPS2Q86UW7 1296 aa19.69■□□□□ 0.74
PRKD2-208ENST00000597390 MYOM2P54296 1465 aa19.67■□□□□ 0.74
PRKD2-208ENST00000597390 ATF3P18847 181 aa19.67■□□□□ 0.74
PRKD2-208ENST00000597390 DCAF11Q8TEB1 546 aa19.67■□□□□ 0.74
PRKD2-208ENST00000597390 DCCP43146 1447 aa19.66■□□□□ 0.74
PRKD2-208ENST00000597390 PHLPP1O60346 1717 aa19.66■□□□□ 0.74
PRKD2-208ENST00000597390 NRXN1Q9ULB1 1477 aa19.65■□□□□ 0.74
PRKD2-208ENST00000597390 STAC3Q96MF2 364 aa19.63■□□□□ 0.73
PRKD2-208ENST00000597390 ADGRF5Q8IZF2 1346 aa19.63■□□□□ 0.73
PRKD2-208ENST00000597390 NALCNQ8IZF0 1738 aa19.62■□□□□ 0.73
PRKD2-208ENST00000597390 PTCH1Q13635 1447 aa19.62■□□□□ 0.73
PRKD2-208ENST00000597390 KDM2AQ9Y2K7 1162 aa19.62■□□□□ 0.73
PRKD2-208ENST00000597390 PRAG1Q86YV5 1406 aa19.61■□□□□ 0.73
PRKD2-208ENST00000597390 ADGRL3Q9HAR2 1447 aa19.61■□□□□ 0.73
PRKD2-208ENST00000597390 PIK3C2GO75747 1445 aa19.6■□□□□ 0.73
PRKD2-208ENST00000597390 POTEAQ6S8J7 498 aa19.59■□□□□ 0.73
PRKD2-208ENST00000597390 COL16A1Q07092 1604 aaPredicted RBP19.59■□□□□ 0.73
PRKD2-208ENST00000597390 AHDC1Q5TGY3 1603 aaPredicted RBP19.59■□□□□ 0.73
PRKD2-208ENST00000597390 MST1RQ04912 1400 aa19.58■□□□□ 0.73
PRKD2-208ENST00000597390 NBPF8Q3BBV2 869 aa19.57■□□□□ 0.72
PRKD2-208ENST00000597390 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
PRKD2-208ENST00000597390 BRINP3Q76B58 766 aa19.56■□□□□ 0.72
PRKD2-208ENST00000597390 JCADQ9P266 1359 aa19.55■□□□□ 0.72
PRKD2-208ENST00000597390 TRPM1Q7Z4N2 1603 aa19.55■□□□□ 0.72
PRKD2-208ENST00000597390 KIAA1210Q9ULL0 1709 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms