RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 LTBP4Q8N2S1 1624 aa26.79■■□□□ 1.88
IRF3-216ENST00000597180 CCDC144AA2RUR9 1427 aa26.76■■□□□ 1.87
IRF3-216ENST00000597180 HDGFP51858 240 aaKnown RBP26.76■■□□□ 1.87
IRF3-216ENST00000597180 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.74■■□□□ 1.87
IRF3-216ENST00000597180 NEXMIFQ5QGS0 1516 aa26.74■■□□□ 1.87
IRF3-216ENST00000597180 PLEKHG1Q9ULL1 1385 aa26.73■■□□□ 1.87
IRF3-216ENST00000597180 ZNF335Q9H4Z2 1342 aaPredicted RBP26.72■■□□□ 1.87
IRF3-216ENST00000597180 PPLO60437 1756 aa26.71■■□□□ 1.87
IRF3-216ENST00000597180 STRCP1A6NGW2 1772 aa26.7■■□□□ 1.86
IRF3-216ENST00000597180 ANKRD30BQ9BXX2 1392 aa26.7■■□□□ 1.86
IRF3-216ENST00000597180 PPP1R15AO75807 674 aaPredicted RBP26.69■■□□□ 1.86
IRF3-216ENST00000597180 ZNF326Q5BKZ1 582 aaKnown RBP26.69■■□□□ 1.86
IRF3-216ENST00000597180 SPATA31E1Q6ZUB1 1445 aa26.68■■□□□ 1.86
IRF3-216ENST00000597180 IFT172Q9UG01 1749 aa26.67■■□□□ 1.86
IRF3-216ENST00000597180 CPS1P31327 1500 aa26.66■■□□□ 1.86
IRF3-216ENST00000597180 NUTM2DQ5VT03 806 aaPredicted RBP26.65■■□□□ 1.86
IRF3-216ENST00000597180 CERKQ8TCT0 537 aa26.65■■□□□ 1.86
IRF3-216ENST00000597180 DIP2AQ14689 1571 aa26.65■■□□□ 1.86
IRF3-216ENST00000597180 NRXN3Q9Y4C0 1643 aa26.65■■□□□ 1.86
IRF3-216ENST00000597180 SETBP1Q9Y6X0 1596 aa26.64■■□□□ 1.86
IRF3-216ENST00000597180 RPGRIP1LQ68CZ1 1315 aa26.64■■□□□ 1.85
IRF3-216ENST00000597180 IQSEC2Q5JU85 1478 aa26.62■■□□□ 1.85
IRF3-216ENST00000597180 ADAMTS13Q76LX8 1427 aa26.62■■□□□ 1.85
IRF3-216ENST00000597180 CHD2O14647 1828 aaKnown RBP26.61■■□□□ 1.85
IRF3-216ENST00000597180 SLC26A8Q96RN1 970 aa26.61■■□□□ 1.85
IRF3-216ENST00000597180 NWD1Q149M9 1564 aa26.59■■□□□ 1.85
IRF3-216ENST00000597180 BCANQ96GW7 911 aa26.59■■□□□ 1.85
IRF3-216ENST00000597180 TBX22Q9Y458 520 aa26.57■■□□□ 1.84
IRF3-216ENST00000597180 VGFO15240 615 aaPredicted RBP26.55■■□□□ 1.84
IRF3-216ENST00000597180 SENP3Q9H4L4 574 aaPredicted RBP26.55■■□□□ 1.84
IRF3-216ENST00000597180 SETD1AO15047 1707 aaKnown RBP26.54■■□□□ 1.84
IRF3-216ENST00000597180 RGL3Q3MIN7 710 aa26.54■■□□□ 1.84
IRF3-216ENST00000597180 XIRP1Q702N8 1843 aaKnown RBP26.53■■□□□ 1.84
IRF3-216ENST00000597180 KCNA6P17658 529 aa26.52■■□□□ 1.84
IRF3-216ENST00000597180 LRRC7Q96NW7 1537 aa26.52■■□□□ 1.84
IRF3-216ENST00000597180 PIK3R4Q99570 1358 aa26.52■■□□□ 1.84
IRF3-216ENST00000597180 NKTRP30414 1462 aaKnown RBP26.5■■□□□ 1.83
IRF3-216ENST00000597180 DHX57Q6P158 1386 aaKnown RBP26.49■■□□□ 1.83
IRF3-216ENST00000597180 ALKQ9UM73 1620 aa26.48■■□□□ 1.83
IRF3-216ENST00000597180 MYOM2P54296 1465 aa26.48■■□□□ 1.83
IRF3-216ENST00000597180 XRN1Q8IZH2 1706 aaKnown RBP26.47■■□□□ 1.83
IRF3-216ENST00000597180 FBXO41Q8TF61 875 aa26.46■■□□□ 1.83
IRF3-216ENST00000597180 NRXN1Q9ULB1 1477 aa26.45■■□□□ 1.82
IRF3-216ENST00000597180 ADGRF5Q8IZF2 1346 aa26.44■■□□□ 1.82
IRF3-216ENST00000597180 PTPRUQ92729 1446 aa26.44■■□□□ 1.82
IRF3-216ENST00000597180 PIK3C2GO75747 1445 aa26.43■■□□□ 1.82
IRF3-216ENST00000597180 METP08581 1390 aa26.43■■□□□ 1.82
IRF3-216ENST00000597180 LAMC1P11047 1609 aa26.39■■□□□ 1.82
IRF3-216ENST00000597180 PCGF6Q9BYE7 350 aa26.39■■□□□ 1.82
IRF3-216ENST00000597180 TMEM94Q12767 1356 aa26.37■■□□□ 1.81
IRF3-216ENST00000597180 AMOTL2Q9Y2J4 779 aa26.37■■□□□ 1.81
IRF3-216ENST00000597180 ILDR1Q86SU0 546 aaPredicted RBP26.36■■□□□ 1.81
IRF3-216ENST00000597180 PROSER2Q86WR7 435 aaPredicted RBP26.36■■□□□ 1.81
IRF3-216ENST00000597180 STAC3Q96MF2 364 aa26.35■■□□□ 1.81
IRF3-216ENST00000597180 PRAG1Q86YV5 1406 aa26.34■■□□□ 1.81
IRF3-216ENST00000597180 ASXL1Q8IXJ9 1541 aa26.34■■□□□ 1.81
IRF3-216ENST00000597180 NCOA3Q9Y6Q9 1424 aa26.32■■□□□ 1.8
IRF3-216ENST00000597180 DCAF11Q8TEB1 546 aa26.32■■□□□ 1.8
IRF3-216ENST00000597180 KNDC1Q76NI1 1749 aa26.31■■□□□ 1.8
IRF3-216ENST00000597180 UBAP1LF5GYI3 381 aa26.3■■□□□ 1.8
IRF3-216ENST00000597180 SIN3AQ96ST3 1273 aa26.3■■□□□ 1.8
IRF3-216ENST00000597180 C14orf93Q9H972 538 aaKnown RBP26.3■■□□□ 1.8
IRF3-216ENST00000597180 PTCH1Q13635 1447 aa26.29■■□□□ 1.8
IRF3-216ENST00000597180 RBM33Q96EV2 1170 aaKnown RBP26.28■■□□□ 1.8
IRF3-216ENST00000597180 KDM2AQ9Y2K7 1162 aa26.27■■□□□ 1.8
IRF3-216ENST00000597180 TOM1O60784 492 aa26.26■■□□□ 1.79
IRF3-216ENST00000597180 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.25■■□□□ 1.79
IRF3-216ENST00000597180 KIAA1210Q9ULL0 1709 aa26.25■■□□□ 1.79
IRF3-216ENST00000597180 TECPR2O15040 1411 aa26.24■■□□□ 1.79
IRF3-216ENST00000597180 LRPPRCP42704 1394 aaKnown RBP26.24■■□□□ 1.79
IRF3-216ENST00000597180 CFAP70Q5T0N1 1121 aa26.24■■□□□ 1.79
IRF3-216ENST00000597180 MSH6P52701 1360 aa26.23■■□□□ 1.79
IRF3-216ENST00000597180 ADGRB1O14514 1584 aa26.23■■□□□ 1.79
IRF3-216ENST00000597180 NALCNQ8IZF0 1738 aa26.22■■□□□ 1.79
IRF3-216ENST00000597180 ROBO2Q9HCK4 1378 aa26.22■■□□□ 1.79
IRF3-216ENST00000597180 NEUROD1Q13562 356 aa26.22■■□□□ 1.79
IRF3-216ENST00000597180 YTHDC2Q9H6S0 1430 aaKnown RBP26.22■■□□□ 1.79
IRF3-216ENST00000597180 TMEM132EQ6IEE7 984 aa26.21■■□□□ 1.79
IRF3-216ENST00000597180 ABCC11Q96J66 1382 aa26.2■■□□□ 1.79
IRF3-216ENST00000597180 L3MBTL2Q969R5 705 aa26.19■■□□□ 1.78
IRF3-216ENST00000597180 ADGRL3Q9HAR2 1447 aa26.18■■□□□ 1.78
IRF3-216ENST00000597180 DCCP43146 1447 aa26.17■■□□□ 1.78
IRF3-216ENST00000597180 C14orf37Q86TY3 774 aa26.17■■□□□ 1.78
IRF3-216ENST00000597180 C19orf44Q9H6X5 657 aa26.17■■□□□ 1.78
IRF3-216ENST00000597180 DLC1Q96QB1 1528 aa26.14■■□□□ 1.78
IRF3-216ENST00000597180 STK26Q9P289 416 aa26.14■■□□□ 1.78
IRF3-216ENST00000597180 FAM135BQ49AJ0 1406 aa26.14■■□□□ 1.77
IRF3-216ENST00000597180 PIP4K2BP78356 416 aa26.13■■□□□ 1.77
IRF3-216ENST00000597180 SIRT1Q96EB6 747 aa26.12■■□□□ 1.77
IRF3-216ENST00000597180 CLSPNQ9HAW4 1339 aa26.11■■□□□ 1.77
IRF3-216ENST00000597180 TRPM1Q7Z4N2 1603 aa26.1■■□□□ 1.77
IRF3-216ENST00000597180 ROBO1Q9Y6N7 1651 aa26.1■■□□□ 1.77
IRF3-216ENST00000597180 CADPS2Q86UW7 1296 aa26.1■■□□□ 1.77
IRF3-216ENST00000597180 SCAF1Q9H7N4 1312 aaKnown RBP26.1■■□□□ 1.77
IRF3-216ENST00000597180 ATF3P18847 181 aa26.09■■□□□ 1.77
IRF3-216ENST00000597180 TONSLQ96HA7 1378 aa26.08■■□□□ 1.77
IRF3-216ENST00000597180 ARHGEF28Q8N1W1 1705 aaKnown RBP26.08■■□□□ 1.77
IRF3-216ENST00000597180 PLEKHH1Q9ULM0 1364 aa26.07■■□□□ 1.76
IRF3-216ENST00000597180 SLAIN2Q9P270 581 aa26.07■■□□□ 1.76
IRF3-216ENST00000597180 CDC42BPGQ6DT37 1551 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms