RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 STRCQ7RTU9 1775 aa22.58■■□□□ 1.2
SMCO4-206ENST00000596676 SLIT1O75093 1534 aa22.57■■□□□ 1.2
SMCO4-206ENST00000596676 ZFYVE9O95405 1425 aa22.57■■□□□ 1.2
SMCO4-206ENST00000596676 ANKLE2Q86XL3 938 aa22.55■■□□□ 1.2
SMCO4-206ENST00000596676 NEXMIFQ5QGS0 1516 aa22.55■■□□□ 1.2
SMCO4-206ENST00000596676 NEURL4Q96JN8 1562 aa22.52■■□□□ 1.2
SMCO4-206ENST00000596676 KDM2AQ9Y2K7 1162 aa22.52■■□□□ 1.2
SMCO4-206ENST00000596676 EID1Q9Y6B2 187 aa22.52■■□□□ 1.2
SMCO4-206ENST00000596676 SCAF11Q99590 1463 aaKnown RBP22.52■■□□□ 1.2
SMCO4-206ENST00000596676 PPP1R15AO75807 674 aaPredicted RBP22.5■■□□□ 1.19
SMCO4-206ENST00000596676 DCAF11Q8TEB1 546 aa22.5■■□□□ 1.19
SMCO4-206ENST00000596676 POLR1AO95602 1720 aaPredicted RBP22.5■■□□□ 1.19
SMCO4-206ENST00000596676 PPLO60437 1756 aa22.5■■□□□ 1.19
SMCO4-206ENST00000596676 L3MBTL2Q969R5 705 aa22.49■■□□□ 1.19
SMCO4-206ENST00000596676 RPGRIP1LQ68CZ1 1315 aa22.49■■□□□ 1.19
SMCO4-206ENST00000596676 ADGRF5Q8IZF2 1346 aa22.49■■□□□ 1.19
SMCO4-206ENST00000596676 IFT172Q9UG01 1749 aa22.48■■□□□ 1.19
SMCO4-206ENST00000596676 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.48■■□□□ 1.19
SMCO4-206ENST00000596676 BCANQ96GW7 911 aa22.46■■□□□ 1.19
SMCO4-206ENST00000596676 NPHP4O75161 1426 aaPredicted RBP22.46■■□□□ 1.19
SMCO4-206ENST00000596676 HDGFP51858 240 aaKnown RBP22.45■■□□□ 1.18
SMCO4-206ENST00000596676 SLC26A8Q96RN1 970 aa22.45■■□□□ 1.18
SMCO4-206ENST00000596676 CLSPNQ9HAW4 1339 aa22.45■■□□□ 1.18
SMCO4-206ENST00000596676 MED14O60244 1454 aa22.43■■□□□ 1.18
SMCO4-206ENST00000596676 PLEKHG1Q9ULL1 1385 aa22.43■■□□□ 1.18
SMCO4-206ENST00000596676 VGFO15240 615 aaPredicted RBP22.43■■□□□ 1.18
SMCO4-206ENST00000596676 IQGAP1P46940 1657 aa22.41■■□□□ 1.18
SMCO4-206ENST00000596676 TONSLQ96HA7 1378 aa22.4■■□□□ 1.18
SMCO4-206ENST00000596676 NRXN3Q9Y4C0 1643 aa22.39■■□□□ 1.18
SMCO4-206ENST00000596676 ADAMTS13Q76LX8 1427 aa22.39■■□□□ 1.17
SMCO4-206ENST00000596676 MYOM2P54296 1465 aa22.37■■□□□ 1.17
SMCO4-206ENST00000596676 NRXN1Q9ULB1 1477 aa22.35■■□□□ 1.17
SMCO4-206ENST00000596676 CFAP70Q5T0N1 1121 aa22.35■■□□□ 1.17
SMCO4-206ENST00000596676 DMRT2Q9Y5R5 561 aa22.35■■□□□ 1.17
SMCO4-206ENST00000596676 SETBP1Q9Y6X0 1596 aa22.34■■□□□ 1.17
SMCO4-206ENST00000596676 PIK3C2GO75747 1445 aa22.34■■□□□ 1.17
SMCO4-206ENST00000596676 NBPF8Q3BBV2 869 aa22.34■■□□□ 1.17
SMCO4-206ENST00000596676 ALKQ9UM73 1620 aa22.33■■□□□ 1.17
SMCO4-206ENST00000596676 TBX22Q9Y458 520 aa22.32■■□□□ 1.16
SMCO4-206ENST00000596676 METP08581 1390 aa22.32■■□□□ 1.16
SMCO4-206ENST00000596676 ZNF335Q9H4Z2 1342 aaPredicted RBP22.31■■□□□ 1.16
SMCO4-206ENST00000596676 TMEM132EQ6IEE7 984 aa22.31■■□□□ 1.16
SMCO4-206ENST00000596676 PRAG1Q86YV5 1406 aa22.31■■□□□ 1.16
SMCO4-206ENST00000596676 SETD1AO15047 1707 aaKnown RBP22.3■■□□□ 1.16
SMCO4-206ENST00000596676 C14orf93Q9H972 538 aaKnown RBP22.29■■□□□ 1.16
SMCO4-206ENST00000596676 PTPRUQ92729 1446 aa22.29■■□□□ 1.16
SMCO4-206ENST00000596676 NBPF1Q3BBV0 1214 aa22.28■■□□□ 1.16
SMCO4-206ENST00000596676 STAC3Q96MF2 364 aa22.28■■□□□ 1.16
SMCO4-206ENST00000596676 ASXL1Q8IXJ9 1541 aa22.26■■□□□ 1.15
SMCO4-206ENST00000596676 STRCP1A6NGW2 1772 aa22.26■■□□□ 1.15
SMCO4-206ENST00000596676 STK26Q9P289 416 aa22.24■■□□□ 1.15
SMCO4-206ENST00000596676 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
SMCO4-206ENST00000596676 DIP2AQ14689 1571 aa22.24■■□□□ 1.15
SMCO4-206ENST00000596676 RBM33Q96EV2 1170 aaKnown RBP22.22■■□□□ 1.15
SMCO4-206ENST00000596676 AMOTL2Q9Y2J4 779 aa22.22■■□□□ 1.15
SMCO4-206ENST00000596676 CHD2O14647 1828 aaKnown RBP22.22■■□□□ 1.15
SMCO4-206ENST00000596676 KCNA6P17658 529 aa22.21■■□□□ 1.15
SMCO4-206ENST00000596676 ADGRB1O14514 1584 aa22.2■■□□□ 1.14
SMCO4-206ENST00000596676 TRPM1Q7Z4N2 1603 aa22.2■■□□□ 1.14
SMCO4-206ENST00000596676 LAMC1P11047 1609 aa22.18■■□□□ 1.14
SMCO4-206ENST00000596676 LTBP4Q8N2S1 1624 aa22.17■■□□□ 1.14
SMCO4-206ENST00000596676 PIK3R4Q99570 1358 aa22.17■■□□□ 1.14
SMCO4-206ENST00000596676 KIAA1210Q9ULL0 1709 aa22.17■■□□□ 1.14
SMCO4-206ENST00000596676 TRAK1Q9UPV9 953 aa22.16■■□□□ 1.14
SMCO4-206ENST00000596676 YTHDC2Q9H6S0 1430 aaKnown RBP22.15■■□□□ 1.14
SMCO4-206ENST00000596676 LRPPRCP42704 1394 aaKnown RBP22.15■■□□□ 1.14
SMCO4-206ENST00000596676 NWD1Q149M9 1564 aa22.15■■□□□ 1.14
SMCO4-206ENST00000596676 XRN1Q8IZH2 1706 aaKnown RBP22.14■■□□□ 1.14
SMCO4-206ENST00000596676 ROBO2Q9HCK4 1378 aa22.13■■□□□ 1.13
SMCO4-206ENST00000596676 WAPLQ7Z5K2 1190 aa22.13■■□□□ 1.13
SMCO4-206ENST00000596676 PROSER2Q86WR7 435 aaPredicted RBP22.13■■□□□ 1.13
SMCO4-206ENST00000596676 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
SMCO4-206ENST00000596676 RALGAPBQ86X10 1494 aa22.12■■□□□ 1.13
SMCO4-206ENST00000596676 ABCC11Q96J66 1382 aa22.11■■□□□ 1.13
SMCO4-206ENST00000596676 PLEKHH1Q9ULM0 1364 aa22.11■■□□□ 1.13
SMCO4-206ENST00000596676 LRRC7Q96NW7 1537 aa22.11■■□□□ 1.13
SMCO4-206ENST00000596676 SAFB2Q14151 953 aaKnown RBP eCLIP22.08■■□□□ 1.13
SMCO4-206ENST00000596676 CARD11Q9BXL7 1154 aa22.08■■□□□ 1.13
SMCO4-206ENST00000596676 XIRP1Q702N8 1843 aaKnown RBP22.08■■□□□ 1.12
SMCO4-206ENST00000596676 TMEM94Q12767 1356 aa22.07■■□□□ 1.12
SMCO4-206ENST00000596676 GPRASP1Q5JY77 1395 aa22.07■■□□□ 1.12
SMCO4-206ENST00000596676 TECPR2O15040 1411 aa22.06■■□□□ 1.12
SMCO4-206ENST00000596676 CPS1P31327 1500 aa22.06■■□□□ 1.12
SMCO4-206ENST00000596676 PRAM1Q96QH2 718 aa22.06■■□□□ 1.12
SMCO4-206ENST00000596676 NKTRP30414 1462 aaKnown RBP22.06■■□□□ 1.12
SMCO4-206ENST00000596676 KNDC1Q76NI1 1749 aa22.06■■□□□ 1.12
SMCO4-206ENST00000596676 PTCH1Q13635 1447 aa22.04■■□□□ 1.12
SMCO4-206ENST00000596676 CERKQ8TCT0 537 aa22.03■■□□□ 1.12
SMCO4-206ENST00000596676 ARHGEF28Q8N1W1 1705 aaKnown RBP22.03■■□□□ 1.12
SMCO4-206ENST00000596676 POGKQ9P215 609 aa22.02■■□□□ 1.12
SMCO4-206ENST00000596676 DLC1Q96QB1 1528 aa22.01■■□□□ 1.11
SMCO4-206ENST00000596676 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.01■■□□□ 1.11
SMCO4-206ENST00000596676 C14orf37Q86TY3 774 aa22■■□□□ 1.11
SMCO4-206ENST00000596676 SIRT1Q96EB6 747 aa22■■□□□ 1.11
SMCO4-206ENST00000596676 FAM135BQ49AJ0 1406 aa21.99■■□□□ 1.11
SMCO4-206ENST00000596676 MINK1Q8N4C8 1332 aaPredicted RBP21.99■■□□□ 1.11
SMCO4-206ENST00000596676 HIRIP3Q9BW71 556 aaPredicted RBP21.98■■□□□ 1.11
SMCO4-206ENST00000596676 NALCNQ8IZF0 1738 aa21.97■■□□□ 1.11
SMCO4-206ENST00000596676 CENPJQ9HC77 1338 aaPredicted RBP21.95■■□□□ 1.1
SMCO4-206ENST00000596676 ST20-MTHFSA0A0A6YYL1 179 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms