RNA–Protein interactions for RNA: ENST00000594497.1

CAPN12-203, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-203ENST00000594497 KCNA6P17658 529 aa24.78■■□□□ 1.56
CAPN12-203ENST00000594497 NWD1Q149M9 1564 aa24.77■■□□□ 1.56
CAPN12-203ENST00000594497 ITGAEP38570 1179 aa24.77■■□□□ 1.56
CAPN12-203ENST00000594497 PPARGC1BQ86YN6 1023 aaKnown RBP24.77■■□□□ 1.56
CAPN12-203ENST00000594497 BCANQ96GW7 911 aa24.75■■□□□ 1.55
CAPN12-203ENST00000594497 TMEM94Q12767 1356 aa24.75■■□□□ 1.55
CAPN12-203ENST00000594497 RIMS2Q9UQ26 1411 aa24.75■■□□□ 1.55
CAPN12-203ENST00000594497 NKTRP30414 1462 aaKnown RBP24.75■■□□□ 1.55
CAPN12-203ENST00000594497 HDGFP51858 240 aaKnown RBP24.74■■□□□ 1.55
CAPN12-203ENST00000594497 PLEKHG1Q9ULL1 1385 aa24.74■■□□□ 1.55
CAPN12-203ENST00000594497 NUP155O75694 1391 aa24.73■■□□□ 1.55
CAPN12-203ENST00000594497 SENP3Q9H4L4 574 aaPredicted RBP24.73■■□□□ 1.55
CAPN12-203ENST00000594497 CHD2O14647 1828 aaKnown RBP24.72■■□□□ 1.55
CAPN12-203ENST00000594497 PPP1R15AO75807 674 aaPredicted RBP24.72■■□□□ 1.55
CAPN12-203ENST00000594497 PROSER2Q86WR7 435 aaPredicted RBP24.71■■□□□ 1.55
CAPN12-203ENST00000594497 CHGAP10645 457 aaKnown RBP24.7■■□□□ 1.54
CAPN12-203ENST00000594497 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.68■■□□□ 1.54
CAPN12-203ENST00000594497 SPHKAPQ2M3C7 1700 aa24.67■■□□□ 1.54
CAPN12-203ENST00000594497 FAM135BQ49AJ0 1406 aa24.67■■□□□ 1.54
CAPN12-203ENST00000594497 RBM33Q96EV2 1170 aaKnown RBP24.65■■□□□ 1.54
CAPN12-203ENST00000594497 ROBO1Q9Y6N7 1651 aa24.65■■□□□ 1.54
CAPN12-203ENST00000594497 DIP2AQ14689 1571 aa24.64■■□□□ 1.54
CAPN12-203ENST00000594497 RRBP1Q9P2E9 1410 aaKnown RBP24.64■■□□□ 1.54
CAPN12-203ENST00000594497 PHF23Q9BUL5 403 aaPredicted RBP24.63■■□□□ 1.53
CAPN12-203ENST00000594497 TBX22Q9Y458 520 aa24.63■■□□□ 1.53
CAPN12-203ENST00000594497 MSH6P52701 1360 aa24.63■■□□□ 1.53
CAPN12-203ENST00000594497 NUTM2DQ5VT03 806 aaPredicted RBP24.6■■□□□ 1.53
CAPN12-203ENST00000594497 ADAMTS13Q76LX8 1427 aa24.6■■□□□ 1.53
CAPN12-203ENST00000594497 TRPM2O94759 1503 aa24.56■■□□□ 1.52
CAPN12-203ENST00000594497 PIK3R4Q99570 1358 aa24.56■■□□□ 1.52
CAPN12-203ENST00000594497 NCOA3Q9Y6Q9 1424 aa24.55■■□□□ 1.52
CAPN12-203ENST00000594497 NAIPQ13075 1403 aa24.54■■□□□ 1.52
CAPN12-203ENST00000594497 SLAIN2Q9P270 581 aa24.52■■□□□ 1.52
CAPN12-203ENST00000594497 PHLPP1O60346 1717 aa24.52■■□□□ 1.52
CAPN12-203ENST00000594497 CLTCL1P53675 1640 aa24.51■■□□□ 1.51
CAPN12-203ENST00000594497 NRXN3Q9Y4C0 1643 aa24.51■■□□□ 1.51
CAPN12-203ENST00000594497 SETBP1Q9Y6X0 1596 aa24.5■■□□□ 1.51
CAPN12-203ENST00000594497 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.5■■□□□ 1.51
CAPN12-203ENST00000594497 KIF1BO60333 1816 aa24.5■■□□□ 1.51
CAPN12-203ENST00000594497 C14orf37Q86TY3 774 aa24.49■■□□□ 1.51
CAPN12-203ENST00000594497 ZNF326Q5BKZ1 582 aaKnown RBP24.48■■□□□ 1.51
CAPN12-203ENST00000594497 PTPRUQ92729 1446 aa24.46■■□□□ 1.51
CAPN12-203ENST00000594497 XRN1Q8IZH2 1706 aaKnown RBP24.46■■□□□ 1.51
CAPN12-203ENST00000594497 HFM1A2PYH4 1435 aa24.45■■□□□ 1.51
CAPN12-203ENST00000594497 AMOTL2Q9Y2J4 779 aa24.45■■□□□ 1.5
CAPN12-203ENST00000594497 NEXMIFQ5QGS0 1516 aa24.45■■□□□ 1.5
CAPN12-203ENST00000594497 C19orf44Q9H6X5 657 aa24.43■■□□□ 1.5
CAPN12-203ENST00000594497 COL16A1Q07092 1604 aaPredicted RBP24.43■■□□□ 1.5
CAPN12-203ENST00000594497 CADPS2Q86UW7 1296 aa24.42■■□□□ 1.5
CAPN12-203ENST00000594497 ATF3P18847 181 aa24.41■■□□□ 1.5
CAPN12-203ENST00000594497 TRIM52Q96A61 297 aa24.41■■□□□ 1.5
CAPN12-203ENST00000594497 RGS17Q9UGC6 210 aaPredicted RBP24.41■■□□□ 1.5
CAPN12-203ENST00000594497 JCADQ9P266 1359 aa24.39■■□□□ 1.49
CAPN12-203ENST00000594497 AHDC1Q5TGY3 1603 aaPredicted RBP24.37■■□□□ 1.49
CAPN12-203ENST00000594497 METP08581 1390 aa24.37■■□□□ 1.49
CAPN12-203ENST00000594497 DCCP43146 1447 aa24.36■■□□□ 1.49
CAPN12-203ENST00000594497 SLC4A1APQ9BWU0 796 aaKnown RBP24.34■■□□□ 1.49
CAPN12-203ENST00000594497 SHPRHQ149N8 1683 aa24.31■■□□□ 1.48
CAPN12-203ENST00000594497 SETD1AO15047 1707 aaKnown RBP24.31■■□□□ 1.48
CAPN12-203ENST00000594497 PPLO60437 1756 aa24.31■■□□□ 1.48
CAPN12-203ENST00000594497 NALCNQ8IZF0 1738 aa24.3■■□□□ 1.48
CAPN12-203ENST00000594497 VGFO15240 615 aaPredicted RBP24.29■■□□□ 1.48
CAPN12-203ENST00000594497 BRINP3Q76B58 766 aa24.28■■□□□ 1.48
CAPN12-203ENST00000594497 MST1RQ04912 1400 aa24.27■■□□□ 1.48
CAPN12-203ENST00000594497 ADGRL3Q9HAR2 1447 aa24.27■■□□□ 1.48
CAPN12-203ENST00000594497 ASXL1Q8IXJ9 1541 aa24.27■■□□□ 1.48
CAPN12-203ENST00000594497 POTEAQ6S8J7 498 aa24.27■■□□□ 1.48
CAPN12-203ENST00000594497 SPATA31A6Q5VVP1 1343 aa24.27■■□□□ 1.48
CAPN12-203ENST00000594497 RPGRIP1LQ68CZ1 1315 aa24.27■■□□□ 1.48
CAPN12-203ENST00000594497 NHSL1Q5SYE7 1610 aa24.26■■□□□ 1.47
CAPN12-203ENST00000594497 LRP6O75581 1613 aa24.24■■□□□ 1.47
CAPN12-203ENST00000594497 PTCH1Q13635 1447 aa24.23■■□□□ 1.47
CAPN12-203ENST00000594497 FOXD1Q16676 465 aa24.2■■□□□ 1.46
CAPN12-203ENST00000594497 CCDC144AA2RUR9 1427 aa24.19■■□□□ 1.46
CAPN12-203ENST00000594497 PRAG1Q86YV5 1406 aa24.19■■□□□ 1.46
CAPN12-203ENST00000594497 MEX3CQ5U5Q3 659 aaKnown RBP24.19■■□□□ 1.46
CAPN12-203ENST00000594497 IFT172Q9UG01 1749 aa24.18■■□□□ 1.46
CAPN12-203ENST00000594497 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
CAPN12-203ENST00000594497 ROBO2Q9HCK4 1378 aa24.17■■□□□ 1.46
CAPN12-203ENST00000594497 MPHOSPH9Q99550 1183 aa24.15■■□□□ 1.46
CAPN12-203ENST00000594497 C1orf167Q5SNV9 1468 aa24.13■■□□□ 1.45
CAPN12-203ENST00000594497 SPATA31E1Q6ZUB1 1445 aa24.13■■□□□ 1.45
CAPN12-203ENST00000594497 ZNF772Q68DY9 489 aaPredicted RBP24.12■■□□□ 1.45
CAPN12-203ENST00000594497 LRRC59Q96AG4 307 aaKnown RBP24.12■■□□□ 1.45
CAPN12-203ENST00000594497 LAMC1P11047 1609 aa24.12■■□□□ 1.45
CAPN12-203ENST00000594497 NUTM2BA6NNL0 878 aaPredicted RBP24.1■■□□□ 1.45
CAPN12-203ENST00000594497 NUTM2EB1AL46 878 aaPredicted RBP24.1■■□□□ 1.45
CAPN12-203ENST00000594497 NUTM2AQ8IVF1 878 aaPredicted RBP24.1■■□□□ 1.45
CAPN12-203ENST00000594497 ADGRF5Q8IZF2 1346 aa24.1■■□□□ 1.45
CAPN12-203ENST00000594497 ACIN1Q9UKV3 1341 aaKnown RBP24.1■■□□□ 1.45
CAPN12-203ENST00000594497 ANKRD30BQ9BXX2 1392 aa24.09■■□□□ 1.45
CAPN12-203ENST00000594497 RGL3Q3MIN7 710 aa24.09■■□□□ 1.45
CAPN12-203ENST00000594497 DDX17Q92841 729 aaKnown RBP24.09■■□□□ 1.45
CAPN12-203ENST00000594497 CDC42BPGQ6DT37 1551 aa24.07■■□□□ 1.44
CAPN12-203ENST00000594497 KNDC1Q76NI1 1749 aa24.06■■□□□ 1.44
CAPN12-203ENST00000594497 PNPLA6Q8IY17 1366 aa24.05■■□□□ 1.44
CAPN12-203ENST00000594497 TECPR2O15040 1411 aa24.03■■□□□ 1.44
CAPN12-203ENST00000594497 PIK3C2GO75747 1445 aa24.03■■□□□ 1.44
CAPN12-203ENST00000594497 ORAI2Q96SN7 254 aa24.03■■□□□ 1.44
CAPN12-203ENST00000594497 AFF2P51816 1311 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms