RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 MYOM2P54296 1465 aa15.64■□□□□ 0.09
USE1-204ENST00000594399 L3MBTL2Q969R5 705 aa15.63■□□□□ 0.09
USE1-204ENST00000594399 RPGRIP1LQ68CZ1 1315 aa15.63■□□□□ 0.09
USE1-204ENST00000594399 SLIT1O75093 1534 aa15.63■□□□□ 0.09
USE1-204ENST00000594399 STRCQ7RTU9 1775 aa15.62■□□□□ 0.09
USE1-204ENST00000594399 ZEB1P37275 1124 aaPredicted RBP15.62■□□□□ 0.09
USE1-204ENST00000594399 TMEM2Q9UHN6 1383 aa15.62■□□□□ 0.09
USE1-204ENST00000594399 ZFYVE9O95405 1425 aa15.61■□□□□ 0.09
USE1-204ENST00000594399 RIMS2Q9UQ26 1411 aa15.61■□□□□ 0.09
USE1-204ENST00000594399 ARHGAP23Q9P227 1491 aa15.61■□□□□ 0.09
USE1-204ENST00000594399 THEMISQ8N1K5 641 aaPredicted RBP15.6■□□□□ 0.09
USE1-204ENST00000594399 DCAF11Q8TEB1 546 aa15.59■□□□□ 0.09
USE1-204ENST00000594399 FBXO41Q8TF61 875 aa15.58■□□□□ 0.08
USE1-204ENST00000594399 NRXN1Q9ULB1 1477 aa15.58■□□□□ 0.08
USE1-204ENST00000594399 STAC3Q96MF2 364 aa15.57■□□□□ 0.08
USE1-204ENST00000594399 PRAG1Q86YV5 1406 aa15.57■□□□□ 0.08
USE1-204ENST00000594399 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.56■□□□□ 0.08
USE1-204ENST00000594399 KDM2AQ9Y2K7 1162 aa15.56■□□□□ 0.08
USE1-204ENST00000594399 SCAF11Q99590 1463 aaKnown RBP15.56■□□□□ 0.08
USE1-204ENST00000594399 POLR1AO95602 1720 aaPredicted RBP15.56■□□□□ 0.08
USE1-204ENST00000594399 LAMC1P11047 1609 aa15.55■□□□□ 0.08
USE1-204ENST00000594399 PIK3C2GO75747 1445 aa15.55■□□□□ 0.08
USE1-204ENST00000594399 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
USE1-204ENST00000594399 CERKQ8TCT0 537 aa15.55■□□□□ 0.08
USE1-204ENST00000594399 NCKAP5LQ9HCH0 1330 aa15.54■□□□□ 0.08
USE1-204ENST00000594399 PPP1R15AO75807 674 aaPredicted RBP15.54■□□□□ 0.08
USE1-204ENST00000594399 HDGFP51858 240 aaKnown RBP15.54■□□□□ 0.08
USE1-204ENST00000594399 ADGRF5Q8IZF2 1346 aa15.53■□□□□ 0.08
USE1-204ENST00000594399 NUTM2DQ5VT03 806 aaPredicted RBP15.53■□□□□ 0.08
USE1-204ENST00000594399 EID1Q9Y6B2 187 aa15.53■□□□□ 0.08
USE1-204ENST00000594399 IQGAP1P46940 1657 aa15.53■□□□□ 0.08
USE1-204ENST00000594399 TRPM1Q7Z4N2 1603 aa15.53■□□□□ 0.08
USE1-204ENST00000594399 SETBP1Q9Y6X0 1596 aa15.53■□□□□ 0.08
USE1-204ENST00000594399 KIAA1210Q9ULL0 1709 aa15.52■□□□□ 0.08
USE1-204ENST00000594399 NRXN3Q9Y4C0 1643 aa15.52■□□□□ 0.08
USE1-204ENST00000594399 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.07
USE1-204ENST00000594399 PLEKHG1Q9ULL1 1385 aa15.51■□□□□ 0.07
USE1-204ENST00000594399 TXNDC2Q86VQ3 553 aa15.51■□□□□ 0.07
USE1-204ENST00000594399 LTKP29376 864 aa15.5■□□□□ 0.07
USE1-204ENST00000594399 ANKLE2Q86XL3 938 aa15.5■□□□□ 0.07
USE1-204ENST00000594399 DIP2AQ14689 1571 aa15.49■□□□□ 0.07
USE1-204ENST00000594399 NBPF8Q3BBV2 869 aa15.49■□□□□ 0.07
USE1-204ENST00000594399 MED14O60244 1454 aa15.48■□□□□ 0.07
USE1-204ENST00000594399 SETD1AO15047 1707 aaKnown RBP15.48■□□□□ 0.07
USE1-204ENST00000594399 ALKQ9UM73 1620 aa15.47■□□□□ 0.07
USE1-204ENST00000594399 NPHP4O75161 1426 aaPredicted RBP15.47■□□□□ 0.07
USE1-204ENST00000594399 ADAMTS13Q76LX8 1427 aa15.45■□□□□ 0.06
USE1-204ENST00000594399 ASXL1Q8IXJ9 1541 aa15.45■□□□□ 0.06
USE1-204ENST00000594399 ROCK2O75116 1388 aaKnown RBP15.45■□□□□ 0.06
USE1-204ENST00000594399 ADGRB1O14514 1584 aa15.45■□□□□ 0.06
USE1-204ENST00000594399 BCANQ96GW7 911 aa15.44■□□□□ 0.06
USE1-204ENST00000594399 CFAP70Q5T0N1 1121 aa15.43■□□□□ 0.06
USE1-204ENST00000594399 SENP3Q9H4L4 574 aaPredicted RBP15.43■□□□□ 0.06
USE1-204ENST00000594399 C14orf93Q9H972 538 aaKnown RBP15.43■□□□□ 0.06
USE1-204ENST00000594399 GPRASP1Q5JY77 1395 aa15.43■□□□□ 0.06
USE1-204ENST00000594399 LTBP4Q8N2S1 1624 aa15.43■□□□□ 0.06
USE1-204ENST00000594399 ZNF335Q9H4Z2 1342 aaPredicted RBP15.42■□□□□ 0.06
USE1-204ENST00000594399 IQSEC2Q5JU85 1478 aa15.4■□□□□ 0.06
USE1-204ENST00000594399 NBPF1Q3BBV0 1214 aa15.39■□□□□ 0.05
USE1-204ENST00000594399 KNDC1Q76NI1 1749 aa15.39■□□□□ 0.05
USE1-204ENST00000594399 SLC26A8Q96RN1 970 aa15.38■□□□□ 0.05
USE1-204ENST00000594399 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
USE1-204ENST00000594399 TBX22Q9Y458 520 aa15.38■□□□□ 0.05
USE1-204ENST00000594399 METP08581 1390 aa15.37■□□□□ 0.05
USE1-204ENST00000594399 PIK3R4Q99570 1358 aa15.37■□□□□ 0.05
USE1-204ENST00000594399 YTHDC2Q9H6S0 1430 aaKnown RBP15.37■□□□□ 0.05
USE1-204ENST00000594399 XRN1Q8IZH2 1706 aaKnown RBP15.37■□□□□ 0.05
USE1-204ENST00000594399 ARHGEF28Q8N1W1 1705 aaKnown RBP15.36■□□□□ 0.05
USE1-204ENST00000594399 NWD1Q149M9 1564 aa15.36■□□□□ 0.05
USE1-204ENST00000594399 LRPPRCP42704 1394 aaKnown RBP15.36■□□□□ 0.05
USE1-204ENST00000594399 USP47Q96K76 1375 aa15.36■□□□□ 0.05
USE1-204ENST00000594399 CPS1P31327 1500 aa15.35■□□□□ 0.05
USE1-204ENST00000594399 TMEM132EQ6IEE7 984 aa15.35■□□□□ 0.05
USE1-204ENST00000594399 EIF3AQ14152 1382 aaKnown RBP15.35■□□□□ 0.05
USE1-204ENST00000594399 CHD2O14647 1828 aaKnown RBP15.34■□□□□ 0.05
USE1-204ENST00000594399 DLC1Q96QB1 1528 aa15.34■□□□□ 0.05
USE1-204ENST00000594399 TECPR2O15040 1411 aa15.34■□□□□ 0.05
USE1-204ENST00000594399 PTPRUQ92729 1446 aa15.33■□□□□ 0.04
USE1-204ENST00000594399 ABCC11Q96J66 1382 aa15.32■□□□□ 0.04
USE1-204ENST00000594399 PTCH1Q13635 1447 aa15.32■□□□□ 0.04
USE1-204ENST00000594399 EIF4G2P78344 907 aaKnown RBP eCLIP15.31■□□□□ 0.04
USE1-204ENST00000594399 STK26Q9P289 416 aa15.31■□□□□ 0.04
USE1-204ENST00000594399 NKTRP30414 1462 aaKnown RBP15.3■□□□□ 0.04
USE1-204ENST00000594399 QRICH2Q9H0J4 1663 aa15.29■□□□□ 0.04
USE1-204ENST00000594399 FAM135BQ49AJ0 1406 aa15.29■□□□□ 0.04
USE1-204ENST00000594399 UBAP1LF5GYI3 381 aa15.29■□□□□ 0.04
USE1-204ENST00000594399 TRAK1Q9UPV9 953 aa15.29■□□□□ 0.04
USE1-204ENST00000594399 AMOTL2Q9Y2J4 779 aa15.28■□□□□ 0.04
USE1-204ENST00000594399 ROBO2Q9HCK4 1378 aa15.27■□□□□ 0.04
USE1-204ENST00000594399 STRCP1A6NGW2 1772 aa15.27■□□□□ 0.04
USE1-204ENST00000594399 HSPA5P11021 654 aaKnown RBP15.27■□□□□ 0.04
USE1-204ENST00000594399 CENPJQ9HC77 1338 aaPredicted RBP15.26■□□□□ 0.03
USE1-204ENST00000594399 KCNA6P17658 529 aa15.26■□□□□ 0.03
USE1-204ENST00000594399 TOM1O60784 492 aa15.25■□□□□ 0.03
USE1-204ENST00000594399 PRAM1Q96QH2 718 aa15.25■□□□□ 0.03
USE1-204ENST00000594399 SBNO2Q9Y2G9 1366 aa15.24■□□□□ 0.03
USE1-204ENST00000594399 ST20-MTHFSA0A0A6YYL1 179 aa15.24■□□□□ 0.03
USE1-204ENST00000594399 SIRT1Q96EB6 747 aa15.24■□□□□ 0.03
USE1-204ENST00000594399 PLEKHH1Q9ULM0 1364 aa15.24■□□□□ 0.03
USE1-204ENST00000594399 POGKQ9P215 609 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms