RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 KIF1BO60333 1816 aa25.92■■□□□ 1.74
IRF3-208ENST00000594387 RIMS2Q9UQ26 1411 aa25.91■■□□□ 1.74
IRF3-208ENST00000594387 SLC4A1APQ9BWU0 796 aaKnown RBP25.91■■□□□ 1.74
IRF3-208ENST00000594387 STRCP1A6NGW2 1772 aa25.91■■□□□ 1.74
IRF3-208ENST00000594387 TOM1O60784 492 aa25.88■■□□□ 1.73
IRF3-208ENST00000594387 SLC26A8Q96RN1 970 aa25.87■■□□□ 1.73
IRF3-208ENST00000594387 ZNF326Q5BKZ1 582 aaKnown RBP25.86■■□□□ 1.73
IRF3-208ENST00000594387 ZFYVE9O95405 1425 aa25.85■■□□□ 1.73
IRF3-208ENST00000594387 PLEKHG1Q9ULL1 1385 aa25.83■■□□□ 1.73
IRF3-208ENST00000594387 SENP3Q9H4L4 574 aaPredicted RBP25.83■■□□□ 1.73
IRF3-208ENST00000594387 SCAF1Q9H7N4 1312 aaKnown RBP25.83■■□□□ 1.73
IRF3-208ENST00000594387 TRPM2O94759 1503 aa25.83■■□□□ 1.72
IRF3-208ENST00000594387 NUTM2DQ5VT03 806 aaPredicted RBP25.81■■□□□ 1.72
IRF3-208ENST00000594387 LRRC7Q96NW7 1537 aa25.81■■□□□ 1.72
IRF3-208ENST00000594387 CLTCL1P53675 1640 aa25.81■■□□□ 1.72
IRF3-208ENST00000594387 SETD5Q9C0A6 1442 aa25.8■■□□□ 1.72
IRF3-208ENST00000594387 KCNA6P17658 529 aa25.8■■□□□ 1.72
IRF3-208ENST00000594387 CHD2O14647 1828 aaKnown RBP25.78■■□□□ 1.72
IRF3-208ENST00000594387 PIP4K2BP78356 416 aa25.77■■□□□ 1.72
IRF3-208ENST00000594387 PROSER2Q86WR7 435 aaPredicted RBP25.76■■□□□ 1.71
IRF3-208ENST00000594387 TBX22Q9Y458 520 aa25.76■■□□□ 1.71
IRF3-208ENST00000594387 MPHOSPH9Q99550 1183 aa25.75■■□□□ 1.71
IRF3-208ENST00000594387 XIRP1Q702N8 1843 aaKnown RBP25.74■■□□□ 1.71
IRF3-208ENST00000594387 DIP2AQ14689 1571 aa25.73■■□□□ 1.71
IRF3-208ENST00000594387 NKTRP30414 1462 aaKnown RBP25.7■■□□□ 1.7
IRF3-208ENST00000594387 NWD1Q149M9 1564 aa25.69■■□□□ 1.7
IRF3-208ENST00000594387 FOXD1Q16676 465 aa25.69■■□□□ 1.7
IRF3-208ENST00000594387 CCDC144AA2RUR9 1427 aa25.67■■□□□ 1.7
IRF3-208ENST00000594387 VGFO15240 615 aaPredicted RBP25.67■■□□□ 1.7
IRF3-208ENST00000594387 TMEM94Q12767 1356 aa25.67■■□□□ 1.7
IRF3-208ENST00000594387 PIK3R4Q99570 1358 aa25.67■■□□□ 1.7
IRF3-208ENST00000594387 RAB3GAP2Q9H2M9 1393 aa25.67■■□□□ 1.7
IRF3-208ENST00000594387 RPGRIP1LQ68CZ1 1315 aa25.66■■□□□ 1.7
IRF3-208ENST00000594387 ADAMTS13Q76LX8 1427 aa25.65■■□□□ 1.7
IRF3-208ENST00000594387 NEXMIFQ5QGS0 1516 aa25.64■■□□□ 1.7
IRF3-208ENST00000594387 PPLO60437 1756 aa25.62■■□□□ 1.69
IRF3-208ENST00000594387 SETBP1Q9Y6X0 1596 aa25.62■■□□□ 1.69
IRF3-208ENST00000594387 C14orf37Q86TY3 774 aa25.62■■□□□ 1.69
IRF3-208ENST00000594387 MSH6P52701 1360 aa25.61■■□□□ 1.69
IRF3-208ENST00000594387 RBM33Q96EV2 1170 aaKnown RBP25.6■■□□□ 1.69
IRF3-208ENST00000594387 AMOTL2Q9Y2J4 779 aa25.59■■□□□ 1.69
IRF3-208ENST00000594387 NRXN3Q9Y4C0 1643 aa25.59■■□□□ 1.69
IRF3-208ENST00000594387 HRCP23327 699 aa25.57■■□□□ 1.68
IRF3-208ENST00000594387 HSPA1LP34931 641 aa25.57■■□□□ 1.68
IRF3-208ENST00000594387 RGL3Q3MIN7 710 aa25.56■■□□□ 1.68
IRF3-208ENST00000594387 ALKQ9UM73 1620 aa25.55■■□□□ 1.68
IRF3-208ENST00000594387 NCOA3Q9Y6Q9 1424 aa25.55■■□□□ 1.68
IRF3-208ENST00000594387 ANKRD30BQ9BXX2 1392 aa25.49■■□□□ 1.67
IRF3-208ENST00000594387 ATF3P18847 181 aa25.49■■□□□ 1.67
IRF3-208ENST00000594387 C19orf44Q9H6X5 657 aa25.49■■□□□ 1.67
IRF3-208ENST00000594387 XRN1Q8IZH2 1706 aaKnown RBP25.49■■□□□ 1.67
IRF3-208ENST00000594387 IFT172Q9UG01 1749 aa25.49■■□□□ 1.67
IRF3-208ENST00000594387 METP08581 1390 aa25.48■■□□□ 1.67
IRF3-208ENST00000594387 PTPRUQ92729 1446 aa25.47■■□□□ 1.67
IRF3-208ENST00000594387 DISP3Q9P2K9 1392 aa25.47■■□□□ 1.67
IRF3-208ENST00000594387 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.47■■□□□ 1.67
IRF3-208ENST00000594387 CADPS2Q86UW7 1296 aa25.47■■□□□ 1.67
IRF3-208ENST00000594387 SLAIN2Q9P270 581 aa25.47■■□□□ 1.67
IRF3-208ENST00000594387 FAM135BQ49AJ0 1406 aa25.46■■□□□ 1.67
IRF3-208ENST00000594387 SPATA31E1Q6ZUB1 1445 aa25.46■■□□□ 1.67
IRF3-208ENST00000594387 ROBO1Q9Y6N7 1651 aa25.45■■□□□ 1.67
IRF3-208ENST00000594387 SETD1AO15047 1707 aaKnown RBP25.43■■□□□ 1.66
IRF3-208ENST00000594387 ADGRF5Q8IZF2 1346 aa25.4■■□□□ 1.66
IRF3-208ENST00000594387 PHLPP1O60346 1717 aa25.36■■□□□ 1.65
IRF3-208ENST00000594387 DCCP43146 1447 aa25.35■■□□□ 1.65
IRF3-208ENST00000594387 PTCH1Q13635 1447 aa25.32■■□□□ 1.64
IRF3-208ENST00000594387 NALCNQ8IZF0 1738 aa25.32■■□□□ 1.64
IRF3-208ENST00000594387 ADGRL3Q9HAR2 1447 aa25.31■■□□□ 1.64
IRF3-208ENST00000594387 LAMC1P11047 1609 aa25.31■■□□□ 1.64
IRF3-208ENST00000594387 PIK3C2GO75747 1445 aa25.3■■□□□ 1.64
IRF3-208ENST00000594387 STK26Q9P289 416 aa25.3■■□□□ 1.64
IRF3-208ENST00000594387 MYOM2P54296 1465 aa25.29■■□□□ 1.64
IRF3-208ENST00000594387 STAC3Q96MF2 364 aa25.29■■□□□ 1.64
IRF3-208ENST00000594387 MED1Q15648 1581 aaPredicted RBP25.29■■□□□ 1.64
IRF3-208ENST00000594387 DCAF11Q8TEB1 546 aa25.27■■□□□ 1.64
IRF3-208ENST00000594387 PHF23Q9BUL5 403 aaPredicted RBP25.27■■□□□ 1.64
IRF3-208ENST00000594387 KDM2AQ9Y2K7 1162 aa25.27■■□□□ 1.64
IRF3-208ENST00000594387 ROBO2Q9HCK4 1378 aa25.27■■□□□ 1.64
IRF3-208ENST00000594387 TMEM132EQ6IEE7 984 aa25.26■■□□□ 1.63
IRF3-208ENST00000594387 C14orf93Q9H972 538 aaKnown RBP25.26■■□□□ 1.63
IRF3-208ENST00000594387 KNDC1Q76NI1 1749 aa25.26■■□□□ 1.63
IRF3-208ENST00000594387 DHX57Q6P158 1386 aaKnown RBP25.25■■□□□ 1.63
IRF3-208ENST00000594387 PRAG1Q86YV5 1406 aa25.25■■□□□ 1.63
IRF3-208ENST00000594387 LRPPRCP42704 1394 aaKnown RBP25.24■■□□□ 1.63
IRF3-208ENST00000594387 NRXN1Q9ULB1 1477 aa25.22■■□□□ 1.63
IRF3-208ENST00000594387 MST1RQ04912 1400 aa25.22■■□□□ 1.63
IRF3-208ENST00000594387 ABCC11Q96J66 1382 aa25.22■■□□□ 1.63
IRF3-208ENST00000594387 CFAP70Q5T0N1 1121 aa25.22■■□□□ 1.63
IRF3-208ENST00000594387 BRINP3Q76B58 766 aa25.21■■□□□ 1.63
IRF3-208ENST00000594387 YTHDC2Q9H6S0 1430 aaKnown RBP25.2■■□□□ 1.63
IRF3-208ENST00000594387 TECPR2O15040 1411 aa25.19■■□□□ 1.62
IRF3-208ENST00000594387 AHDC1Q5TGY3 1603 aaPredicted RBP25.19■■□□□ 1.62
IRF3-208ENST00000594387 JCADQ9P266 1359 aa25.18■■□□□ 1.62
IRF3-208ENST00000594387 COL16A1Q07092 1604 aaPredicted RBP25.18■■□□□ 1.62
IRF3-208ENST00000594387 WAPLQ7Z5K2 1190 aa25.17■■□□□ 1.62
IRF3-208ENST00000594387 ASXL1Q8IXJ9 1541 aa25.17■■□□□ 1.62
IRF3-208ENST00000594387 SIRT1Q96EB6 747 aa25.16■■□□□ 1.62
IRF3-208ENST00000594387 TRIM26Q12899 539 aaPredicted RBP25.15■■□□□ 1.62
IRF3-208ENST00000594387 NHSL1Q5SYE7 1610 aa25.15■■□□□ 1.62
IRF3-208ENST00000594387 C1orf167Q5SNV9 1468 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms