RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 NWD1Q149M9 1564 aa25.59■■□□□ 1.69
LTBP4-209ENST00000594116 MED1Q15648 1581 aaPredicted RBP25.59■■□□□ 1.69
LTBP4-209ENST00000594116 ITGAEP38570 1179 aa25.58■■□□□ 1.69
LTBP4-209ENST00000594116 KCNA6P17658 529 aa25.57■■□□□ 1.68
LTBP4-209ENST00000594116 NKTRP30414 1462 aaKnown RBP25.56■■□□□ 1.68
LTBP4-209ENST00000594116 SLC26A8Q96RN1 970 aa25.56■■□□□ 1.68
LTBP4-209ENST00000594116 PLEKHG1Q9ULL1 1385 aa25.56■■□□□ 1.68
LTBP4-209ENST00000594116 RIMS2Q9UQ26 1411 aa25.55■■□□□ 1.68
LTBP4-209ENST00000594116 SOCS7O14512 581 aa25.55■■□□□ 1.68
LTBP4-209ENST00000594116 NUP155O75694 1391 aa25.55■■□□□ 1.68
LTBP4-209ENST00000594116 TMEM94Q12767 1356 aa25.54■■□□□ 1.68
LTBP4-209ENST00000594116 HDGFP51858 240 aaKnown RBP25.52■■□□□ 1.68
LTBP4-209ENST00000594116 CHD2O14647 1828 aaKnown RBP25.51■■□□□ 1.67
LTBP4-209ENST00000594116 HFM1A2PYH4 1435 aa25.48■■□□□ 1.67
LTBP4-209ENST00000594116 PPP1R15AO75807 674 aaPredicted RBP25.48■■□□□ 1.67
LTBP4-209ENST00000594116 BCANQ96GW7 911 aa25.48■■□□□ 1.67
LTBP4-209ENST00000594116 SPHKAPQ2M3C7 1700 aa25.47■■□□□ 1.67
LTBP4-209ENST00000594116 PROSER2Q86WR7 435 aaPredicted RBP25.47■■□□□ 1.67
LTBP4-209ENST00000594116 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.47■■□□□ 1.67
LTBP4-209ENST00000594116 FAM135BQ49AJ0 1406 aa25.46■■□□□ 1.67
LTBP4-209ENST00000594116 DIP2AQ14689 1571 aa25.46■■□□□ 1.67
LTBP4-209ENST00000594116 NAIPQ13075 1403 aa25.46■■□□□ 1.67
LTBP4-209ENST00000594116 CHGAP10645 457 aaKnown RBP25.45■■□□□ 1.66
LTBP4-209ENST00000594116 TBX22Q9Y458 520 aa25.42■■□□□ 1.66
LTBP4-209ENST00000594116 ADAMTS13Q76LX8 1427 aa25.42■■□□□ 1.66
LTBP4-209ENST00000594116 ROBO1Q9Y6N7 1651 aa25.41■■□□□ 1.66
LTBP4-209ENST00000594116 SENP3Q9H4L4 574 aaPredicted RBP25.4■■□□□ 1.66
LTBP4-209ENST00000594116 MSH6P52701 1360 aa25.4■■□□□ 1.66
LTBP4-209ENST00000594116 RBM33Q96EV2 1170 aaKnown RBP25.39■■□□□ 1.66
LTBP4-209ENST00000594116 PIK3R4Q99570 1358 aa25.38■■□□□ 1.65
LTBP4-209ENST00000594116 NCOA3Q9Y6Q9 1424 aa25.37■■□□□ 1.65
LTBP4-209ENST00000594116 SETD5Q9C0A6 1442 aa25.36■■□□□ 1.65
LTBP4-209ENST00000594116 NUTM2DQ5VT03 806 aaPredicted RBP25.35■■□□□ 1.65
LTBP4-209ENST00000594116 TRPM2O94759 1503 aa25.35■■□□□ 1.65
LTBP4-209ENST00000594116 PCGF6Q9BYE7 350 aa25.34■■□□□ 1.65
LTBP4-209ENST00000594116 PHF23Q9BUL5 403 aaPredicted RBP25.33■■□□□ 1.65
LTBP4-209ENST00000594116 SETBP1Q9Y6X0 1596 aa25.32■■□□□ 1.64
LTBP4-209ENST00000594116 CLTCL1P53675 1640 aa25.32■■□□□ 1.64
LTBP4-209ENST00000594116 NRXN3Q9Y4C0 1643 aa25.32■■□□□ 1.64
LTBP4-209ENST00000594116 SLAIN2Q9P270 581 aa25.29■■□□□ 1.64
LTBP4-209ENST00000594116 RAB3GAP2Q9H2M9 1393 aa25.28■■□□□ 1.64
LTBP4-209ENST00000594116 KIF1BO60333 1816 aa25.28■■□□□ 1.64
LTBP4-209ENST00000594116 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.27■■□□□ 1.64
LTBP4-209ENST00000594116 XRN1Q8IZH2 1706 aaKnown RBP25.26■■□□□ 1.63
LTBP4-209ENST00000594116 PTPRUQ92729 1446 aa25.26■■□□□ 1.63
LTBP4-209ENST00000594116 NEXMIFQ5QGS0 1516 aa25.26■■□□□ 1.63
LTBP4-209ENST00000594116 PHLPP1O60346 1717 aa25.26■■□□□ 1.63
LTBP4-209ENST00000594116 ZNF326Q5BKZ1 582 aaKnown RBP25.24■■□□□ 1.63
LTBP4-209ENST00000594116 HRCP23327 699 aa25.22■■□□□ 1.63
LTBP4-209ENST00000594116 AMOTL2Q9Y2J4 779 aa25.22■■□□□ 1.63
LTBP4-209ENST00000594116 C14orf37Q86TY3 774 aa25.21■■□□□ 1.63
LTBP4-209ENST00000594116 C19orf44Q9H6X5 657 aa25.21■■□□□ 1.63
LTBP4-209ENST00000594116 CADPS2Q86UW7 1296 aa25.2■■□□□ 1.62
LTBP4-209ENST00000594116 COL16A1Q07092 1604 aaPredicted RBP25.19■■□□□ 1.62
LTBP4-209ENST00000594116 ACIN1Q9UKV3 1341 aaKnown RBP25.19■■□□□ 1.62
LTBP4-209ENST00000594116 DCCP43146 1447 aa25.19■■□□□ 1.62
LTBP4-209ENST00000594116 TRIM52Q96A61 297 aa25.17■■□□□ 1.62
LTBP4-209ENST00000594116 AHDC1Q5TGY3 1603 aaPredicted RBP25.16■■□□□ 1.62
LTBP4-209ENST00000594116 ATF3P18847 181 aa25.16■■□□□ 1.62
LTBP4-209ENST00000594116 RGS17Q9UGC6 210 aaPredicted RBP25.16■■□□□ 1.62
LTBP4-209ENST00000594116 METP08581 1390 aa25.16■■□□□ 1.62
LTBP4-209ENST00000594116 JCADQ9P266 1359 aa25.15■■□□□ 1.62
LTBP4-209ENST00000594116 SLC4A1APQ9BWU0 796 aaKnown RBP25.14■■□□□ 1.62
LTBP4-209ENST00000594116 SETD1AO15047 1707 aaKnown RBP25.12■■□□□ 1.61
LTBP4-209ENST00000594116 PPLO60437 1756 aa25.1■■□□□ 1.61
LTBP4-209ENST00000594116 NALCNQ8IZF0 1738 aa25.08■■□□□ 1.61
LTBP4-209ENST00000594116 RPGRIP1LQ68CZ1 1315 aa25.08■■□□□ 1.6
LTBP4-209ENST00000594116 SHPRHQ149N8 1683 aa25.07■■□□□ 1.6
LTBP4-209ENST00000594116 ADGRL3Q9HAR2 1447 aa25.07■■□□□ 1.6
LTBP4-209ENST00000594116 VGFO15240 615 aaPredicted RBP25.07■■□□□ 1.6
LTBP4-209ENST00000594116 MST1RQ04912 1400 aa25.06■■□□□ 1.6
LTBP4-209ENST00000594116 BRINP3Q76B58 766 aa25.05■■□□□ 1.6
LTBP4-209ENST00000594116 ASXL1Q8IXJ9 1541 aa25.05■■□□□ 1.6
LTBP4-209ENST00000594116 PTCH1Q13635 1447 aa25.04■■□□□ 1.6
LTBP4-209ENST00000594116 PRAG1Q86YV5 1406 aa25.04■■□□□ 1.6
LTBP4-209ENST00000594116 NHSL1Q5SYE7 1610 aa25.03■■□□□ 1.6
LTBP4-209ENST00000594116 SPATA31A6Q5VVP1 1343 aa25.03■■□□□ 1.6
LTBP4-209ENST00000594116 POTEAQ6S8J7 498 aa25.01■■□□□ 1.59
LTBP4-209ENST00000594116 LRP6O75581 1613 aa25.01■■□□□ 1.59
LTBP4-209ENST00000594116 CCDC144AA2RUR9 1427 aa24.99■■□□□ 1.59
LTBP4-209ENST00000594116 FOXD1Q16676 465 aa24.98■■□□□ 1.59
LTBP4-209ENST00000594116 MPHOSPH9Q99550 1183 aa24.98■■□□□ 1.59
LTBP4-209ENST00000594116 IFT172Q9UG01 1749 aa24.98■■□□□ 1.59
LTBP4-209ENST00000594116 DHX57Q6P158 1386 aaKnown RBP24.96■■□□□ 1.59
LTBP4-209ENST00000594116 ROBO2Q9HCK4 1378 aa24.96■■□□□ 1.59
LTBP4-209ENST00000594116 SPATA31E1Q6ZUB1 1445 aa24.95■■□□□ 1.59
LTBP4-209ENST00000594116 LAMC1P11047 1609 aa24.92■■□□□ 1.58
LTBP4-209ENST00000594116 C1orf167Q5SNV9 1468 aa24.91■■□□□ 1.58
LTBP4-209ENST00000594116 ANKRD30BQ9BXX2 1392 aa24.91■■□□□ 1.58
LTBP4-209ENST00000594116 MEX3CQ5U5Q3 659 aaKnown RBP24.89■■□□□ 1.58
LTBP4-209ENST00000594116 ADGRF5Q8IZF2 1346 aa24.88■■□□□ 1.57
LTBP4-209ENST00000594116 LRRC59Q96AG4 307 aaKnown RBP24.87■■□□□ 1.57
LTBP4-209ENST00000594116 CDC42BPGQ6DT37 1551 aa24.86■■□□□ 1.57
LTBP4-209ENST00000594116 TECPR2O15040 1411 aa24.86■■□□□ 1.57
LTBP4-209ENST00000594116 RGL3Q3MIN7 710 aa24.85■■□□□ 1.57
LTBP4-209ENST00000594116 ZNF772Q68DY9 489 aaPredicted RBP24.85■■□□□ 1.57
LTBP4-209ENST00000594116 KNDC1Q76NI1 1749 aa24.85■■□□□ 1.57
LTBP4-209ENST00000594116 PIK3C2GO75747 1445 aa24.84■■□□□ 1.57
LTBP4-209ENST00000594116 PNPLA6Q8IY17 1366 aa24.83■■□□□ 1.57
LTBP4-209ENST00000594116 DDX17Q92841 729 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms