RNA–Protein interactions for RNA: ENST00000593899.5

SYMPK-203, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-203ENST00000593899 TMEM131LA2VDJ0 1609 aa18.61■□□□□ 0.57
SYMPK-203ENST00000593899 STAG3Q9UJ98 1225 aa18.61■□□□□ 0.57
SYMPK-203ENST00000593899 MYO5BQ9ULV0 1848 aa18.59■□□□□ 0.57
SYMPK-203ENST00000593899 ZFYVE9O95405 1425 aa18.58■□□□□ 0.57
SYMPK-203ENST00000593899 EID1Q9Y6B2 187 aa18.58■□□□□ 0.56
SYMPK-203ENST00000593899 SPHKAPQ2M3C7 1700 aa18.57■□□□□ 0.56
SYMPK-203ENST00000593899 TRIM52Q96A61 297 aa18.54■□□□□ 0.56
SYMPK-203ENST00000593899 RGS17Q9UGC6 210 aaPredicted RBP18.54■□□□□ 0.56
SYMPK-203ENST00000593899 TRPM2O94759 1503 aa18.53■□□□□ 0.56
SYMPK-203ENST00000593899 RIMS2Q9UQ26 1411 aa18.52■□□□□ 0.56
SYMPK-203ENST00000593899 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
SYMPK-203ENST00000593899 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
SYMPK-203ENST00000593899 XIRP1Q702N8 1843 aaKnown RBP18.51■□□□□ 0.55
SYMPK-203ENST00000593899 CLTCL1P53675 1640 aa18.5■□□□□ 0.55
SYMPK-203ENST00000593899 CHGAP10645 457 aaKnown RBP18.49■□□□□ 0.55
SYMPK-203ENST00000593899 PLEKHG1Q9ULL1 1385 aa18.49■□□□□ 0.55
SYMPK-203ENST00000593899 HDGFP51858 240 aaKnown RBP18.48■□□□□ 0.55
SYMPK-203ENST00000593899 FAM135BQ49AJ0 1406 aa18.48■□□□□ 0.55
SYMPK-203ENST00000593899 ACIN1Q9UKV3 1341 aaKnown RBP18.48■□□□□ 0.55
SYMPK-203ENST00000593899 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.47■□□□□ 0.55
SYMPK-203ENST00000593899 SLC26A8Q96RN1 970 aa18.46■□□□□ 0.55
SYMPK-203ENST00000593899 MPHOSPH9Q99550 1183 aa18.46■□□□□ 0.55
SYMPK-203ENST00000593899 RAB3GAP2Q9H2M9 1393 aa18.45■□□□□ 0.54
SYMPK-203ENST00000593899 ADAMTS13Q76LX8 1427 aa18.43■□□□□ 0.54
SYMPK-203ENST00000593899 KCNA6P17658 529 aa18.43■□□□□ 0.54
SYMPK-203ENST00000593899 FOXD1Q16676 465 aa18.43■□□□□ 0.54
SYMPK-203ENST00000593899 TBX22Q9Y458 520 aa18.43■□□□□ 0.54
SYMPK-203ENST00000593899 KIF1BO60333 1816 aa18.42■□□□□ 0.54
SYMPK-203ENST00000593899 HRCP23327 699 aa18.42■□□□□ 0.54
SYMPK-203ENST00000593899 SENP3Q9H4L4 574 aaPredicted RBP18.42■□□□□ 0.54
SYMPK-203ENST00000593899 PPP1R15AO75807 674 aaPredicted RBP18.41■□□□□ 0.54
SYMPK-203ENST00000593899 NUTM2DQ5VT03 806 aaPredicted RBP18.41■□□□□ 0.54
SYMPK-203ENST00000593899 NWD1Q149M9 1564 aa18.41■□□□□ 0.54
SYMPK-203ENST00000593899 NEXMIFQ5QGS0 1516 aa18.4■□□□□ 0.54
SYMPK-203ENST00000593899 CHD2O14647 1828 aaKnown RBP18.39■□□□□ 0.54
SYMPK-203ENST00000593899 POTEAQ6S8J7 498 aa18.39■□□□□ 0.53
SYMPK-203ENST00000593899 NRXN3Q9Y4C0 1643 aa18.38■□□□□ 0.53
SYMPK-203ENST00000593899 DIP2AQ14689 1571 aa18.38■□□□□ 0.53
SYMPK-203ENST00000593899 SETBP1Q9Y6X0 1596 aa18.38■□□□□ 0.53
SYMPK-203ENST00000593899 ROBO1Q9Y6N7 1651 aa18.38■□□□□ 0.53
SYMPK-203ENST00000593899 ZNF326Q5BKZ1 582 aaKnown RBP18.37■□□□□ 0.53
SYMPK-203ENST00000593899 BCANQ96GW7 911 aa18.37■□□□□ 0.53
SYMPK-203ENST00000593899 NKTRP30414 1462 aaKnown RBP18.36■□□□□ 0.53
SYMPK-203ENST00000593899 TMEM94Q12767 1356 aa18.35■□□□□ 0.53
SYMPK-203ENST00000593899 PIK3R4Q99570 1358 aa18.35■□□□□ 0.53
SYMPK-203ENST00000593899 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
SYMPK-203ENST00000593899 RPGRIP1LQ68CZ1 1315 aa18.34■□□□□ 0.53
SYMPK-203ENST00000593899 CCDC144AA2RUR9 1427 aa18.33■□□□□ 0.53
SYMPK-203ENST00000593899 PTPRUQ92729 1446 aa18.32■□□□□ 0.52
SYMPK-203ENST00000593899 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
SYMPK-203ENST00000593899 PPLO60437 1756 aa18.31■□□□□ 0.52
SYMPK-203ENST00000593899 SETD1AO15047 1707 aaKnown RBP18.3■□□□□ 0.52
SYMPK-203ENST00000593899 VGFO15240 615 aaPredicted RBP18.3■□□□□ 0.52
SYMPK-203ENST00000593899 METP08581 1390 aa18.29■□□□□ 0.52
SYMPK-203ENST00000593899 ANKRD30BQ9BXX2 1392 aa18.29■□□□□ 0.52
SYMPK-203ENST00000593899 RBM33Q96EV2 1170 aaKnown RBP18.28■□□□□ 0.52
SYMPK-203ENST00000593899 NCOA3Q9Y6Q9 1424 aa18.27■□□□□ 0.52
SYMPK-203ENST00000593899 AMOTL2Q9Y2J4 779 aa18.27■□□□□ 0.52
SYMPK-203ENST00000593899 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
SYMPK-203ENST00000593899 IFT172Q9UG01 1749 aa18.26■□□□□ 0.51
SYMPK-203ENST00000593899 PHLPP1O60346 1717 aa18.25■□□□□ 0.51
SYMPK-203ENST00000593899 JCADQ9P266 1359 aa18.25■□□□□ 0.51
SYMPK-203ENST00000593899 RGL3Q3MIN7 710 aa18.24■□□□□ 0.51
SYMPK-203ENST00000593899 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
SYMPK-203ENST00000593899 COL16A1Q07092 1604 aaPredicted RBP18.23■□□□□ 0.51
SYMPK-203ENST00000593899 MSH6P52701 1360 aa18.22■□□□□ 0.51
SYMPK-203ENST00000593899 PRAG1Q86YV5 1406 aa18.2■□□□□ 0.5
SYMPK-203ENST00000593899 LRP6O75581 1613 aa18.19■□□□□ 0.5
SYMPK-203ENST00000593899 C19orf44Q9H6X5 657 aa18.18■□□□□ 0.5
SYMPK-203ENST00000593899 SLAIN2Q9P270 581 aa18.18■□□□□ 0.5
SYMPK-203ENST00000593899 NRXN1Q9ULB1 1477 aa18.18■□□□□ 0.5
SYMPK-203ENST00000593899 PIK3C2GO75747 1445 aa18.17■□□□□ 0.5
SYMPK-203ENST00000593899 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.17■□□□□ 0.5
SYMPK-203ENST00000593899 SPATA31A6Q5VVP1 1343 aa18.17■□□□□ 0.5
SYMPK-203ENST00000593899 AHDC1Q5TGY3 1603 aaPredicted RBP18.16■□□□□ 0.5
SYMPK-203ENST00000593899 SHPRHQ149N8 1683 aa18.15■□□□□ 0.5
SYMPK-203ENST00000593899 MYOM2P54296 1465 aa18.15■□□□□ 0.5
SYMPK-203ENST00000593899 UPF1Q92900 1129 aaKnown RBP eCLIP18.15■□□□□ 0.5
SYMPK-203ENST00000593899 PTCH1Q13635 1447 aa18.15■□□□□ 0.5
SYMPK-203ENST00000593899 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
SYMPK-203ENST00000593899 ROBO2Q9HCK4 1378 aa18.13■□□□□ 0.49
SYMPK-203ENST00000593899 DCCP43146 1447 aa18.13■□□□□ 0.49
SYMPK-203ENST00000593899 CDK12Q9NYV4 1490 aaPredicted RBP18.13■□□□□ 0.49
SYMPK-203ENST00000593899 ZNF772Q68DY9 489 aaPredicted RBP18.12■□□□□ 0.49
SYMPK-203ENST00000593899 CADPS2Q86UW7 1296 aa18.12■□□□□ 0.49
SYMPK-203ENST00000593899 C14orf93Q9H972 538 aaKnown RBP18.12■□□□□ 0.49
SYMPK-203ENST00000593899 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
SYMPK-203ENST00000593899 TECPR2O15040 1411 aa18.11■□□□□ 0.49
SYMPK-203ENST00000593899 ADGRL3Q9HAR2 1447 aa18.1■□□□□ 0.49
SYMPK-203ENST00000593899 C14orf37Q86TY3 774 aa18.1■□□□□ 0.49
SYMPK-203ENST00000593899 LRPPRCP42704 1394 aaKnown RBP18.09■□□□□ 0.49
SYMPK-203ENST00000593899 ABCC11Q96J66 1382 aa18.09■□□□□ 0.49
SYMPK-203ENST00000593899 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
SYMPK-203ENST00000593899 ATF3P18847 181 aa18.08■□□□□ 0.48
SYMPK-203ENST00000593899 TMEM132EQ6IEE7 984 aa18.08■□□□□ 0.48
SYMPK-203ENST00000593899 STAC3Q96MF2 364 aa18.08■□□□□ 0.48
SYMPK-203ENST00000593899 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
SYMPK-203ENST00000593899 CFAP70Q5T0N1 1121 aa18.07■□□□□ 0.48
SYMPK-203ENST00000593899 MST1RQ04912 1400 aa18.06■□□□□ 0.48
SYMPK-203ENST00000593899 SRCAPQ6ZRS2 3230 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms