RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 E9PCH4 1651 aa33.36■■■□□ 2.93
USF2-204ENST00000593708 KCNA6P17658 529 aa33.34■■■□□ 2.93
USF2-204ENST00000593708 IQGAP3Q86VI3 1631 aa33.31■■■□□ 2.92
USF2-204ENST00000593708 RBM33Q96EV2 1170 aaKnown RBP33.31■■■□□ 2.92
USF2-204ENST00000593708 ROCK1Q13464 1354 aa33.31■■■□□ 2.92
USF2-204ENST00000593708 NKTRP30414 1462 aaKnown RBP33.31■■■□□ 2.92
USF2-204ENST00000593708 RIMS2Q9UQ26 1411 aa33.28■■■□□ 2.92
USF2-204ENST00000593708 FAM135BQ49AJ0 1406 aa33.27■■■□□ 2.92
USF2-204ENST00000593708 ROBO1Q9Y6N7 1651 aa33.26■■■□□ 2.92
USF2-204ENST00000593708 CHD2O14647 1828 aaKnown RBP33.26■■■□□ 2.92
USF2-204ENST00000593708 PLEKHG1Q9ULL1 1385 aa33.26■■■□□ 2.92
USF2-204ENST00000593708 PROSER2Q86WR7 435 aaPredicted RBP33.25■■■□□ 2.91
USF2-204ENST00000593708 PHF23Q9BUL5 403 aaPredicted RBP33.25■■■□□ 2.91
USF2-204ENST00000593708 BCANQ96GW7 911 aa33.22■■■□□ 2.91
USF2-204ENST00000593708 PPARGC1BQ86YN6 1023 aaKnown RBP33.18■■■□□ 2.9
USF2-204ENST00000593708 PPP1R15AO75807 674 aaPredicted RBP33.17■■■□□ 2.9
USF2-204ENST00000593708 ITGAEP38570 1179 aa33.16■■■□□ 2.9
USF2-204ENST00000593708 ADAMTS13Q76LX8 1427 aa33.14■■■□□ 2.9
USF2-204ENST00000593708 NUP155O75694 1391 aa33.14■■■□□ 2.9
USF2-204ENST00000593708 CHGAP10645 457 aaKnown RBP33.14■■■□□ 2.9
USF2-204ENST00000593708 MSH6P52701 1360 aa33.12■■■□□ 2.89
USF2-204ENST00000593708 NUTM2DQ5VT03 806 aaPredicted RBP33.12■■■□□ 2.89
USF2-204ENST00000593708 RGS17Q9UGC6 210 aaPredicted RBP33.12■■■□□ 2.89
USF2-204ENST00000593708 HDGFP51858 240 aaKnown RBP33.09■■■□□ 2.89
USF2-204ENST00000593708 DIP2AQ14689 1571 aa33.09■■■□□ 2.89
USF2-204ENST00000593708 TBX22Q9Y458 520 aa33.08■■■□□ 2.89
USF2-204ENST00000593708 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.07■■■□□ 2.88
USF2-204ENST00000593708 SPHKAPQ2M3C7 1700 aa33.07■■■□□ 2.88
USF2-204ENST00000593708 PHLPP1O60346 1717 aa33.05■■■□□ 2.88
USF2-204ENST00000593708 SLAIN2Q9P270 581 aa33.03■■■□□ 2.88
USF2-204ENST00000593708 NRXN3Q9Y4C0 1643 aa33.01■■■□□ 2.87
USF2-204ENST00000593708 SIPA1L2Q9P2F8 1722 aaPredicted RBP33■■■□□ 2.87
USF2-204ENST00000593708 TRPM2O94759 1503 aa32.98■■■□□ 2.87
USF2-204ENST00000593708 NCOA3Q9Y6Q9 1424 aa32.98■■■□□ 2.87
USF2-204ENST00000593708 COL16A1Q07092 1604 aaPredicted RBP32.98■■■□□ 2.87
USF2-204ENST00000593708 PIK3R4Q99570 1358 aa32.97■■■□□ 2.87
USF2-204ENST00000593708 PTPRUQ92729 1446 aa32.97■■■□□ 2.87
USF2-204ENST00000593708 RRBP1Q9P2E9 1410 aaKnown RBP32.94■■■□□ 2.86
USF2-204ENST00000593708 SETBP1Q9Y6X0 1596 aa32.93■■■□□ 2.86
USF2-204ENST00000593708 XRN1Q8IZH2 1706 aaKnown RBP32.93■■■□□ 2.86
USF2-204ENST00000593708 CLTCL1P53675 1640 aa32.92■■■□□ 2.86
USF2-204ENST00000593708 C14orf37Q86TY3 774 aa32.91■■■□□ 2.86
USF2-204ENST00000593708 POTEAQ6S8J7 498 aa32.89■■■□□ 2.86
USF2-204ENST00000593708 AMOTL2Q9Y2J4 779 aa32.88■■■□□ 2.85
USF2-204ENST00000593708 NAIPQ13075 1403 aa32.87■■■□□ 2.85
USF2-204ENST00000593708 JCADQ9P266 1359 aa32.87■■■□□ 2.85
USF2-204ENST00000593708 AHDC1Q5TGY3 1603 aaPredicted RBP32.85■■■□□ 2.85
USF2-204ENST00000593708 C19orf44Q9H6X5 657 aa32.85■■■□□ 2.85
USF2-204ENST00000593708 NEXMIFQ5QGS0 1516 aa32.85■■■□□ 2.85
USF2-204ENST00000593708 CADPS2Q86UW7 1296 aa32.83■■■□□ 2.85
USF2-204ENST00000593708 ATF3P18847 181 aa32.81■■■□□ 2.84
USF2-204ENST00000593708 ZNF326Q5BKZ1 582 aaKnown RBP32.81■■■□□ 2.84
USF2-204ENST00000593708 METP08581 1390 aa32.81■■■□□ 2.84
USF2-204ENST00000593708 LRP6O75581 1613 aa32.8■■■□□ 2.84
USF2-204ENST00000593708 KIF1BO60333 1816 aa32.8■■■□□ 2.84
USF2-204ENST00000593708 SHPRHQ149N8 1683 aa32.77■■■□□ 2.84
USF2-204ENST00000593708 DCCP43146 1447 aa32.77■■■□□ 2.84
USF2-204ENST00000593708 SETD1AO15047 1707 aaKnown RBP32.75■■■□□ 2.83
USF2-204ENST00000593708 BRINP3Q76B58 766 aa32.74■■■□□ 2.83
USF2-204ENST00000593708 NALCNQ8IZF0 1738 aa32.73■■■□□ 2.83
USF2-204ENST00000593708 ASXL1Q8IXJ9 1541 aa32.72■■■□□ 2.83
USF2-204ENST00000593708 HFM1A2PYH4 1435 aa32.71■■■□□ 2.83
USF2-204ENST00000593708 MST1RQ04912 1400 aa32.71■■■□□ 2.83
USF2-204ENST00000593708 NHSL1Q5SYE7 1610 aa32.69■■■□□ 2.82
USF2-204ENST00000593708 SPATA31A6Q5VVP1 1343 aa32.68■■■□□ 2.82
USF2-204ENST00000593708 ADGRL3Q9HAR2 1447 aa32.67■■■□□ 2.82
USF2-204ENST00000593708 PPLO60437 1756 aa32.61■■■□□ 2.81
USF2-204ENST00000593708 TRIM52Q96A61 297 aa32.61■■■□□ 2.81
USF2-204ENST00000593708 SETD5Q9C0A6 1442 aa32.58■■■□□ 2.81
USF2-204ENST00000593708 MEX3CQ5U5Q3 659 aaKnown RBP32.57■■■□□ 2.8
USF2-204ENST00000593708 PTCH1Q13635 1447 aa32.57■■■□□ 2.8
USF2-204ENST00000593708 SLC4A1APQ9BWU0 796 aaKnown RBP32.56■■■□□ 2.8
USF2-204ENST00000593708 ROBO2Q9HCK4 1378 aa32.55■■■□□ 2.8
USF2-204ENST00000593708 DDX17Q92841 729 aaKnown RBP32.54■■■□□ 2.8
USF2-204ENST00000593708 PRAG1Q86YV5 1406 aa32.51■■■□□ 2.8
USF2-204ENST00000593708 NUTM2BA6NNL0 878 aaPredicted RBP32.51■■■□□ 2.79
USF2-204ENST00000593708 NUTM2EB1AL46 878 aaPredicted RBP32.51■■■□□ 2.79
USF2-204ENST00000593708 VGFO15240 615 aaPredicted RBP32.51■■■□□ 2.79
USF2-204ENST00000593708 NUTM2AQ8IVF1 878 aaPredicted RBP32.51■■■□□ 2.79
USF2-204ENST00000593708 FOXD1Q16676 465 aa32.5■■■□□ 2.79
USF2-204ENST00000593708 C1orf167Q5SNV9 1468 aa32.49■■■□□ 2.79
USF2-204ENST00000593708 ZNF772Q68DY9 489 aaPredicted RBP32.49■■■□□ 2.79
USF2-204ENST00000593708 LAMC1P11047 1609 aa32.48■■■□□ 2.79
USF2-204ENST00000593708 RPGRIP1LQ68CZ1 1315 aa32.48■■■□□ 2.79
USF2-204ENST00000593708 PNPLA6Q8IY17 1366 aa32.45■■■□□ 2.79
USF2-204ENST00000593708 LRRC59Q96AG4 307 aaKnown RBP32.43■■■□□ 2.78
USF2-204ENST00000593708 IFT172Q9UG01 1749 aa32.42■■■□□ 2.78
USF2-204ENST00000593708 AFF2P51816 1311 aa32.4■■■□□ 2.78
USF2-204ENST00000593708 SPATA31E1Q6ZUB1 1445 aa32.39■■■□□ 2.78
USF2-204ENST00000593708 ORAI2Q96SN7 254 aa32.38■■■□□ 2.77
USF2-204ENST00000593708 CCDC144AA2RUR9 1427 aa32.36■■■□□ 2.77
USF2-204ENST00000593708 ADGRF5Q8IZF2 1346 aa32.36■■■□□ 2.77
USF2-204ENST00000593708 CDC42BPGQ6DT37 1551 aa32.35■■■□□ 2.77
USF2-204ENST00000593708 RXRBP28702 533 aa32.34■■■□□ 2.77
USF2-204ENST00000593708 SOS2Q07890 1332 aaPredicted RBP32.33■■■□□ 2.77
USF2-204ENST00000593708 CDK12Q9NYV4 1490 aaPredicted RBP32.32■■■□□ 2.76
USF2-204ENST00000593708 C8orf37Q96NL8 207 aa32.32■■■□□ 2.76
USF2-204ENST00000593708 RGL3Q3MIN7 710 aa32.3■■■□□ 2.76
USF2-204ENST00000593708 MPHOSPH9Q99550 1183 aa32.3■■■□□ 2.76
USF2-204ENST00000593708 TECPR2O15040 1411 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms