RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 NUTM2DQ5VT03 806 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-220ENST00000593104 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
PRKCSH-220ENST00000593104 NWD1Q149M9 1564 aa17.46■□□□□ 0.39
PRKCSH-220ENST00000593104 ANKRD50Q9ULJ7 1429 aa17.46■□□□□ 0.39
PRKCSH-220ENST00000593104 POTEAQ6S8J7 498 aa17.45■□□□□ 0.38
PRKCSH-220ENST00000593104 ZFYVE9O95405 1425 aa17.44■□□□□ 0.38
PRKCSH-220ENST00000593104 RIMS2Q9UQ26 1411 aa17.42■□□□□ 0.38
PRKCSH-220ENST00000593104 CHGAP10645 457 aaKnown RBP17.42■□□□□ 0.38
PRKCSH-220ENST00000593104 SLC52A1Q9NWF4 448 aa17.42■□□□□ 0.38
PRKCSH-220ENST00000593104 TMEM131LA2VDJ0 1609 aa17.42■□□□□ 0.38
PRKCSH-220ENST00000593104 NKTRP30414 1462 aaKnown RBP17.42■□□□□ 0.38
PRKCSH-220ENST00000593104 CHD2O14647 1828 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-220ENST00000593104 E9PCH4 1651 aa17.4■□□□□ 0.38
PRKCSH-220ENST00000593104 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-220ENST00000593104 PHLPP1O60346 1717 aa17.4■□□□□ 0.38
PRKCSH-220ENST00000593104 MSH6P52701 1360 aa17.4■□□□□ 0.38
PRKCSH-220ENST00000593104 UNC13BO14795 1591 aa17.39■□□□□ 0.37
PRKCSH-220ENST00000593104 PLEKHG1Q9ULL1 1385 aa17.39■□□□□ 0.37
PRKCSH-220ENST00000593104 SETD1AO15047 1707 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-220ENST00000593104 RPRD2Q5VT52 1461 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-220ENST00000593104 PPARGC1BQ86YN6 1023 aaKnown RBP17.37■□□□□ 0.37
PRKCSH-220ENST00000593104 SLAIN2Q9P270 581 aa17.37■□□□□ 0.37
PRKCSH-220ENST00000593104 ADAMTS13Q76LX8 1427 aa17.36■□□□□ 0.37
PRKCSH-220ENST00000593104 ITGAEP38570 1179 aa17.35■□□□□ 0.37
PRKCSH-220ENST00000593104 COL16A1Q07092 1604 aaPredicted RBP17.33■□□□□ 0.37
PRKCSH-220ENST00000593104 C14orf37Q86TY3 774 aa17.33■□□□□ 0.36
PRKCSH-220ENST00000593104 LRP6O75581 1613 aa17.32■□□□□ 0.36
PRKCSH-220ENST00000593104 IQGAP3Q86VI3 1631 aa17.32■□□□□ 0.36
PRKCSH-220ENST00000593104 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-220ENST00000593104 TBX22Q9Y458 520 aa17.31■□□□□ 0.36
PRKCSH-220ENST00000593104 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
PRKCSH-220ENST00000593104 JCADQ9P266 1359 aa17.29■□□□□ 0.36
PRKCSH-220ENST00000593104 NUP155O75694 1391 aa17.28■□□□□ 0.36
PRKCSH-220ENST00000593104 HDGFP51858 240 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-220ENST00000593104 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
PRKCSH-220ENST00000593104 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.26■□□□□ 0.35
PRKCSH-220ENST00000593104 ROCK1Q13464 1354 aa17.26■□□□□ 0.35
PRKCSH-220ENST00000593104 AMOTL2Q9Y2J4 779 aa17.25■□□□□ 0.35
PRKCSH-220ENST00000593104 DIP2AQ14689 1571 aa17.24■□□□□ 0.35
PRKCSH-220ENST00000593104 TRPM2O94759 1503 aa17.23■□□□□ 0.35
PRKCSH-220ENST00000593104 ATF3P18847 181 aa17.23■□□□□ 0.35
PRKCSH-220ENST00000593104 AHDC1Q5TGY3 1603 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-220ENST00000593104 MEX3CQ5U5Q3 659 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-220ENST00000593104 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
PRKCSH-220ENST00000593104 C19orf44Q9H6X5 657 aa17.22■□□□□ 0.35
PRKCSH-220ENST00000593104 SPHKAPQ2M3C7 1700 aa17.21■□□□□ 0.35
PRKCSH-220ENST00000593104 NUTM2BA6NNL0 878 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-220ENST00000593104 NUTM2EB1AL46 878 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-220ENST00000593104 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
PRKCSH-220ENST00000593104 CADPS2Q86UW7 1296 aa17.21■□□□□ 0.35
PRKCSH-220ENST00000593104 NUTM2AQ8IVF1 878 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-220ENST00000593104 DDX17Q92841 729 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-220ENST00000593104 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-220ENST00000593104 NCOA3Q9Y6Q9 1424 aa17.21■□□□□ 0.34
PRKCSH-220ENST00000593104 METP08581 1390 aa17.2■□□□□ 0.34
PRKCSH-220ENST00000593104 SHPRHQ149N8 1683 aa17.2■□□□□ 0.34
PRKCSH-220ENST00000593104 PIK3R4Q99570 1358 aa17.19■□□□□ 0.34
PRKCSH-220ENST00000593104 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-220ENST00000593104 SPATA31A6Q5VVP1 1343 aa17.18■□□□□ 0.34
PRKCSH-220ENST00000593104 CLTCL1P53675 1640 aa17.18■□□□□ 0.34
PRKCSH-220ENST00000593104 ASXL1Q8IXJ9 1541 aa17.17■□□□□ 0.34
PRKCSH-220ENST00000593104 SETBP1Q9Y6X0 1596 aa17.17■□□□□ 0.34
PRKCSH-220ENST00000593104 MST1RQ04912 1400 aa17.16■□□□□ 0.34
PRKCSH-220ENST00000593104 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
PRKCSH-220ENST00000593104 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
PRKCSH-220ENST00000593104 NHSL1Q5SYE7 1610 aa17.13■□□□□ 0.33
PRKCSH-220ENST00000593104 ZNF772Q68DY9 489 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-220ENST00000593104 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
PRKCSH-220ENST00000593104 AFF2P51816 1311 aa17.11■□□□□ 0.33
PRKCSH-220ENST00000593104 DCCP43146 1447 aa17.1■□□□□ 0.33
PRKCSH-220ENST00000593104 ADGRL3Q9HAR2 1447 aa17.09■□□□□ 0.33
PRKCSH-220ENST00000593104 SETD5Q9C0A6 1442 aa17.08■□□□□ 0.32
PRKCSH-220ENST00000593104 RXRBP28702 533 aa17.08■□□□□ 0.32
PRKCSH-220ENST00000593104 KIF1BO60333 1816 aa17.07■□□□□ 0.32
PRKCSH-220ENST00000593104 C8orf37Q96NL8 207 aa17.07■□□□□ 0.32
PRKCSH-220ENST00000593104 NAIPQ13075 1403 aa17.06■□□□□ 0.32
PRKCSH-220ENST00000593104 PNPLA6Q8IY17 1366 aa17.06■□□□□ 0.32
PRKCSH-220ENST00000593104 C1orf167Q5SNV9 1468 aa17.05■□□□□ 0.32
PRKCSH-220ENST00000593104 ROBO2Q9HCK4 1378 aa17.04■□□□□ 0.32
PRKCSH-220ENST00000593104 ADAMTS2O95450 1211 aa17.04■□□□□ 0.32
PRKCSH-220ENST00000593104 ORAI2Q96SN7 254 aa17.04■□□□□ 0.32
PRKCSH-220ENST00000593104 LRRC59Q96AG4 307 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-220ENST00000593104 RGS12O14924 1447 aa17.03■□□□□ 0.32
PRKCSH-220ENST00000593104 RRBP1Q9P2E9 1410 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-220ENST00000593104 FOXD1Q16676 465 aa17.02■□□□□ 0.32
PRKCSH-220ENST00000593104 QTRT2Q9H974 415 aaKnown RBP17■□□□□ 0.31
PRKCSH-220ENST00000593104 PPLO60437 1756 aa16.99■□□□□ 0.31
PRKCSH-220ENST00000593104 PTCH1Q13635 1447 aa16.98■□□□□ 0.31
PRKCSH-220ENST00000593104 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
PRKCSH-220ENST00000593104 NGLY1Q96IV0 654 aa16.97■□□□□ 0.31
PRKCSH-220ENST00000593104 XPCQ01831 940 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-220ENST00000593104 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-220ENST00000593104 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.3
PRKCSH-220ENST00000593104 NUTM2FA1L443 756 aa16.95■□□□□ 0.3
PRKCSH-220ENST00000593104 RBM6P78332 1123 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-220ENST00000593104 LAMC1P11047 1609 aa16.95■□□□□ 0.3
PRKCSH-220ENST00000593104 VGFO15240 615 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-220ENST00000593104 HFM1A2PYH4 1435 aa16.94■□□□□ 0.3
PRKCSH-220ENST00000593104 ADGRF5Q8IZF2 1346 aa16.94■□□□□ 0.3
PRKCSH-220ENST00000593104 STK26Q9P289 416 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms