RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 KCNA6P17658 529 aa31.4■■■□□ 2.62
TRIM47-207ENST00000593089 E9PCH4 1651 aa31.4■■■□□ 2.62
TRIM47-207ENST00000593089 TMEM131LA2VDJ0 1609 aa31.38■■■□□ 2.61
TRIM47-207ENST00000593089 IQGAP3Q86VI3 1631 aa31.38■■■□□ 2.61
TRIM47-207ENST00000593089 TMEM94Q12767 1356 aa31.37■■■□□ 2.61
TRIM47-207ENST00000593089 ZFYVE9O95405 1425 aa31.36■■■□□ 2.61
TRIM47-207ENST00000593089 RIMS2Q9UQ26 1411 aa31.34■■■□□ 2.61
TRIM47-207ENST00000593089 CHGAP10645 457 aaKnown RBP31.34■■■□□ 2.61
TRIM47-207ENST00000593089 PROSER2Q86WR7 435 aaPredicted RBP31.34■■■□□ 2.61
TRIM47-207ENST00000593089 PPP1R15AO75807 674 aaPredicted RBP31.33■■■□□ 2.61
TRIM47-207ENST00000593089 RBM33Q96EV2 1170 aaKnown RBP31.33■■■□□ 2.61
TRIM47-207ENST00000593089 NWD1Q149M9 1564 aa31.32■■■□□ 2.6
TRIM47-207ENST00000593089 NUP155O75694 1391 aa31.31■■■□□ 2.6
TRIM47-207ENST00000593089 PLEKHG1Q9ULL1 1385 aa31.31■■■□□ 2.6
TRIM47-207ENST00000593089 HDGFP51858 240 aaKnown RBP31.3■■■□□ 2.6
TRIM47-207ENST00000593089 NKTRP30414 1462 aaKnown RBP31.29■■■□□ 2.6
TRIM47-207ENST00000593089 PHF23Q9BUL5 403 aaPredicted RBP31.26■■■□□ 2.59
TRIM47-207ENST00000593089 CHD2O14647 1828 aaKnown RBP31.24■■■□□ 2.59
TRIM47-207ENST00000593089 NUTM2DQ5VT03 806 aaPredicted RBP31.24■■■□□ 2.59
TRIM47-207ENST00000593089 FAM135BQ49AJ0 1406 aa31.24■■■□□ 2.59
TRIM47-207ENST00000593089 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.23■■■□□ 2.59
TRIM47-207ENST00000593089 ROBO1Q9Y6N7 1651 aa31.2■■■□□ 2.59
TRIM47-207ENST00000593089 MSH6P52701 1360 aa31.18■■■□□ 2.58
TRIM47-207ENST00000593089 TBX22Q9Y458 520 aa31.18■■■□□ 2.58
TRIM47-207ENST00000593089 ADAMTS13Q76LX8 1427 aa31.15■■■□□ 2.58
TRIM47-207ENST00000593089 SPHKAPQ2M3C7 1700 aa31.15■■■□□ 2.58
TRIM47-207ENST00000593089 RRBP1Q9P2E9 1410 aaKnown RBP31.13■■■□□ 2.57
TRIM47-207ENST00000593089 DIP2AQ14689 1571 aa31.13■■■□□ 2.57
TRIM47-207ENST00000593089 SLAIN2Q9P270 581 aa31.08■■■□□ 2.57
TRIM47-207ENST00000593089 C14orf37Q86TY3 774 aa31.06■■■□□ 2.56
TRIM47-207ENST00000593089 TRPM2O94759 1503 aa31.06■■■□□ 2.56
TRIM47-207ENST00000593089 PIK3R4Q99570 1358 aa31.05■■■□□ 2.56
TRIM47-207ENST00000593089 NAIPQ13075 1403 aa31.04■■■□□ 2.56
TRIM47-207ENST00000593089 ZNF326Q5BKZ1 582 aaKnown RBP31.03■■■□□ 2.56
TRIM47-207ENST00000593089 NCOA3Q9Y6Q9 1424 aa31.03■■■□□ 2.56
TRIM47-207ENST00000593089 PHLPP1O60346 1717 aa31.03■■■□□ 2.56
TRIM47-207ENST00000593089 CLTCL1P53675 1640 aa31■■■□□ 2.55
TRIM47-207ENST00000593089 NRXN3Q9Y4C0 1643 aa31■■■□□ 2.55
TRIM47-207ENST00000593089 AMOTL2Q9Y2J4 779 aa31■■■□□ 2.55
TRIM47-207ENST00000593089 PTPRUQ92729 1446 aa30.99■■■□□ 2.55
TRIM47-207ENST00000593089 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.99■■■□□ 2.55
TRIM47-207ENST00000593089 RGS17Q9UGC6 210 aaPredicted RBP30.99■■■□□ 2.55
TRIM47-207ENST00000593089 SETBP1Q9Y6X0 1596 aa30.96■■■□□ 2.55
TRIM47-207ENST00000593089 C19orf44Q9H6X5 657 aa30.95■■■□□ 2.55
TRIM47-207ENST00000593089 KIF1BO60333 1816 aa30.94■■■□□ 2.54
TRIM47-207ENST00000593089 ATF3P18847 181 aa30.93■■■□□ 2.54
TRIM47-207ENST00000593089 CADPS2Q86UW7 1296 aa30.93■■■□□ 2.54
TRIM47-207ENST00000593089 TRIM52Q96A61 297 aa30.93■■■□□ 2.54
TRIM47-207ENST00000593089 XRN1Q8IZH2 1706 aaKnown RBP30.92■■■□□ 2.54
TRIM47-207ENST00000593089 NEXMIFQ5QGS0 1516 aa30.92■■■□□ 2.54
TRIM47-207ENST00000593089 HFM1A2PYH4 1435 aa30.9■■■□□ 2.54
TRIM47-207ENST00000593089 COL16A1Q07092 1604 aaPredicted RBP30.9■■■□□ 2.54
TRIM47-207ENST00000593089 JCADQ9P266 1359 aa30.89■■■□□ 2.54
TRIM47-207ENST00000593089 METP08581 1390 aa30.88■■■□□ 2.53
TRIM47-207ENST00000593089 POTEAQ6S8J7 498 aa30.83■■■□□ 2.53
TRIM47-207ENST00000593089 AHDC1Q5TGY3 1603 aaPredicted RBP30.83■■■□□ 2.53
TRIM47-207ENST00000593089 SLC4A1APQ9BWU0 796 aaKnown RBP30.82■■■□□ 2.52
TRIM47-207ENST00000593089 DCCP43146 1447 aa30.81■■■□□ 2.52
TRIM47-207ENST00000593089 BRINP3Q76B58 766 aa30.78■■■□□ 2.52
TRIM47-207ENST00000593089 MST1RQ04912 1400 aa30.74■■■□□ 2.51
TRIM47-207ENST00000593089 VGFO15240 615 aaPredicted RBP30.74■■■□□ 2.51
TRIM47-207ENST00000593089 SPATA31A6Q5VVP1 1343 aa30.73■■■□□ 2.51
TRIM47-207ENST00000593089 LRP6O75581 1613 aa30.73■■■□□ 2.51
TRIM47-207ENST00000593089 NALCNQ8IZF0 1738 aa30.73■■■□□ 2.51
TRIM47-207ENST00000593089 SHPRHQ149N8 1683 aa30.73■■■□□ 2.51
TRIM47-207ENST00000593089 ASXL1Q8IXJ9 1541 aa30.73■■■□□ 2.51
TRIM47-207ENST00000593089 ADGRL3Q9HAR2 1447 aa30.73■■■□□ 2.51
TRIM47-207ENST00000593089 SETD1AO15047 1707 aaKnown RBP30.72■■■□□ 2.51
TRIM47-207ENST00000593089 FOXD1Q16676 465 aa30.71■■■□□ 2.51
TRIM47-207ENST00000593089 PPLO60437 1756 aa30.7■■■□□ 2.51
TRIM47-207ENST00000593089 MEX3CQ5U5Q3 659 aaKnown RBP30.69■■■□□ 2.5
TRIM47-207ENST00000593089 RPGRIP1LQ68CZ1 1315 aa30.69■■■□□ 2.5
TRIM47-207ENST00000593089 NHSL1Q5SYE7 1610 aa30.66■■■□□ 2.5
TRIM47-207ENST00000593089 PTCH1Q13635 1447 aa30.64■■■□□ 2.49
TRIM47-207ENST00000593089 ROBO2Q9HCK4 1378 aa30.63■■■□□ 2.49
TRIM47-207ENST00000593089 NUTM2BA6NNL0 878 aaPredicted RBP30.61■■■□□ 2.49
TRIM47-207ENST00000593089 NUTM2EB1AL46 878 aaPredicted RBP30.61■■■□□ 2.49
TRIM47-207ENST00000593089 NUTM2AQ8IVF1 878 aaPredicted RBP30.61■■■□□ 2.49
TRIM47-207ENST00000593089 CCDC144AA2RUR9 1427 aa30.6■■■□□ 2.49
TRIM47-207ENST00000593089 DDX17Q92841 729 aaKnown RBP30.6■■■□□ 2.49
TRIM47-207ENST00000593089 SETD5Q9C0A6 1442 aa30.6■■■□□ 2.49
TRIM47-207ENST00000593089 MPHOSPH9Q99550 1183 aa30.58■■■□□ 2.49
TRIM47-207ENST00000593089 C1orf167Q5SNV9 1468 aa30.57■■■□□ 2.48
TRIM47-207ENST00000593089 RGL3Q3MIN7 710 aa30.56■■■□□ 2.48
TRIM47-207ENST00000593089 ZNF772Q68DY9 489 aaPredicted RBP30.56■■■□□ 2.48
TRIM47-207ENST00000593089 LRRC59Q96AG4 307 aaKnown RBP30.56■■■□□ 2.48
TRIM47-207ENST00000593089 PRAG1Q86YV5 1406 aa30.55■■■□□ 2.48
TRIM47-207ENST00000593089 ADGRF5Q8IZF2 1346 aa30.53■■■□□ 2.48
TRIM47-207ENST00000593089 IFT172Q9UG01 1749 aa30.51■■■□□ 2.47
TRIM47-207ENST00000593089 SPATA31E1Q6ZUB1 1445 aa30.51■■■□□ 2.47
TRIM47-207ENST00000593089 ORAI2Q96SN7 254 aa30.49■■■□□ 2.47
TRIM47-207ENST00000593089 PNPLA6Q8IY17 1366 aa30.49■■■□□ 2.47
TRIM47-207ENST00000593089 ANKRD30BQ9BXX2 1392 aa30.46■■■□□ 2.47
TRIM47-207ENST00000593089 LAMC1P11047 1609 aa30.46■■■□□ 2.47
TRIM47-207ENST00000593089 AFF2P51816 1311 aa30.45■■■□□ 2.46
TRIM47-207ENST00000593089 STK26Q9P289 416 aa30.44■■■□□ 2.46
TRIM47-207ENST00000593089 CDC42BPGQ6DT37 1551 aa30.41■■■□□ 2.46
TRIM47-207ENST00000593089 RXRBP28702 533 aa30.41■■■□□ 2.46
TRIM47-207ENST00000593089 C8orf37Q96NL8 207 aa30.41■■■□□ 2.46
TRIM47-207ENST00000593089 SOS2Q07890 1332 aaPredicted RBP30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms