RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ZNF326Q5BKZ1 582 aaKnown RBP21.88■■□□□ 1.09
DDX39A-221ENST00000593026 MED14O60244 1454 aa21.88■■□□□ 1.09
DDX39A-221ENST00000593026 NPHP4O75161 1426 aaPredicted RBP21.88■■□□□ 1.09
DDX39A-221ENST00000593026 HDGFP51858 240 aaKnown RBP21.87■■□□□ 1.09
DDX39A-221ENST00000593026 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
DDX39A-221ENST00000593026 IQGAP1P46940 1657 aa21.85■■□□□ 1.09
DDX39A-221ENST00000593026 PPP1R15AO75807 674 aaPredicted RBP21.85■■□□□ 1.09
DDX39A-221ENST00000593026 ILDR1Q86SU0 546 aaPredicted RBP21.85■■□□□ 1.09
DDX39A-221ENST00000593026 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.85■■□□□ 1.09
DDX39A-221ENST00000593026 SPATA31E1Q6ZUB1 1445 aa21.83■■□□□ 1.09
DDX39A-221ENST00000593026 NEXMIFQ5QGS0 1516 aa21.82■■□□□ 1.08
DDX39A-221ENST00000593026 NUTM2DQ5VT03 806 aaPredicted RBP21.81■■□□□ 1.08
DDX39A-221ENST00000593026 RGL3Q3MIN7 710 aa21.8■■□□□ 1.08
DDX39A-221ENST00000593026 RPGRIP1LQ68CZ1 1315 aa21.8■■□□□ 1.08
DDX39A-221ENST00000593026 PLEKHG1Q9ULL1 1385 aa21.79■■□□□ 1.08
DDX39A-221ENST00000593026 FBXO41Q8TF61 875 aa21.79■■□□□ 1.08
DDX39A-221ENST00000593026 PPLO60437 1756 aa21.77■■□□□ 1.08
DDX39A-221ENST00000593026 BCANQ96GW7 911 aa21.77■■□□□ 1.08
DDX39A-221ENST00000593026 CERKQ8TCT0 537 aa21.75■■□□□ 1.07
DDX39A-221ENST00000593026 SENP3Q9H4L4 574 aaPredicted RBP21.75■■□□□ 1.07
DDX39A-221ENST00000593026 VGFO15240 615 aaPredicted RBP21.74■■□□□ 1.07
DDX39A-221ENST00000593026 IFT172Q9UG01 1749 aa21.74■■□□□ 1.07
DDX39A-221ENST00000593026 SLC26A8Q96RN1 970 aa21.72■■□□□ 1.07
DDX39A-221ENST00000593026 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
DDX39A-221ENST00000593026 ZNF335Q9H4Z2 1342 aaPredicted RBP21.7■■□□□ 1.06
DDX39A-221ENST00000593026 DIP2AQ14689 1571 aa21.7■■□□□ 1.06
DDX39A-221ENST00000593026 ADAMTS13Q76LX8 1427 aa21.69■■□□□ 1.06
DDX39A-221ENST00000593026 NRXN3Q9Y4C0 1643 aa21.69■■□□□ 1.06
DDX39A-221ENST00000593026 SIN3AQ96ST3 1273 aa21.68■■□□□ 1.06
DDX39A-221ENST00000593026 MYOM2P54296 1465 aa21.67■■□□□ 1.06
DDX39A-221ENST00000593026 TBX22Q9Y458 520 aa21.67■■□□□ 1.06
DDX39A-221ENST00000593026 ADGRF5Q8IZF2 1346 aa21.66■■□□□ 1.06
DDX39A-221ENST00000593026 NEUROD1Q13562 356 aa21.66■■□□□ 1.06
DDX39A-221ENST00000593026 LTBP4Q8N2S1 1624 aa21.65■■□□□ 1.06
DDX39A-221ENST00000593026 DCAF11Q8TEB1 546 aa21.64■■□□□ 1.05
DDX39A-221ENST00000593026 NRXN1Q9ULB1 1477 aa21.62■■□□□ 1.05
DDX39A-221ENST00000593026 PIK3C2GO75747 1445 aa21.62■■□□□ 1.05
DDX39A-221ENST00000593026 ALKQ9UM73 1620 aa21.62■■□□□ 1.05
DDX39A-221ENST00000593026 CPS1P31327 1500 aa21.61■■□□□ 1.05
DDX39A-221ENST00000593026 STAC3Q96MF2 364 aa21.61■■□□□ 1.05
DDX39A-221ENST00000593026 KDM2AQ9Y2K7 1162 aa21.61■■□□□ 1.05
DDX39A-221ENST00000593026 STRCP1A6NGW2 1772 aa21.61■■□□□ 1.05
DDX39A-221ENST00000593026 PIK3R4Q99570 1358 aa21.61■■□□□ 1.05
DDX39A-221ENST00000593026 SETD1AO15047 1707 aaKnown RBP21.59■■□□□ 1.05
DDX39A-221ENST00000593026 KCNA6P17658 529 aa21.59■■□□□ 1.05
DDX39A-221ENST00000593026 NWD1Q149M9 1564 aa21.59■■□□□ 1.05
DDX39A-221ENST00000593026 CHD2O14647 1828 aaKnown RBP21.58■■□□□ 1.05
DDX39A-221ENST00000593026 CCER1Q8TC90 406 aaPredicted RBP21.58■■□□□ 1.05
DDX39A-221ENST00000593026 METP08581 1390 aa21.58■■□□□ 1.04
DDX39A-221ENST00000593026 CLSPNQ9HAW4 1339 aa21.57■■□□□ 1.04
DDX39A-221ENST00000593026 IQSEC2Q5JU85 1478 aa21.57■■□□□ 1.04
DDX39A-221ENST00000593026 LAMC1P11047 1609 aa21.56■■□□□ 1.04
DDX39A-221ENST00000593026 L3MBTL2Q969R5 705 aa21.56■■□□□ 1.04
DDX39A-221ENST00000593026 TONSLQ96HA7 1378 aa21.55■■□□□ 1.04
DDX39A-221ENST00000593026 NKTRP30414 1462 aaKnown RBP21.55■■□□□ 1.04
DDX39A-221ENST00000593026 PTPRUQ92729 1446 aa21.54■■□□□ 1.04
DDX39A-221ENST00000593026 XRN1Q8IZH2 1706 aaKnown RBP21.52■■□□□ 1.04
DDX39A-221ENST00000593026 LRRC7Q96NW7 1537 aa21.52■■□□□ 1.04
DDX39A-221ENST00000593026 C14orf93Q9H972 538 aaKnown RBP21.52■■□□□ 1.04
DDX39A-221ENST00000593026 AMOTL2Q9Y2J4 779 aa21.52■■□□□ 1.04
DDX39A-221ENST00000593026 CFAP70Q5T0N1 1121 aa21.51■■□□□ 1.03
DDX39A-221ENST00000593026 ASXL1Q8IXJ9 1541 aa21.5■■□□□ 1.03
DDX39A-221ENST00000593026 PRAG1Q86YV5 1406 aa21.5■■□□□ 1.03
DDX39A-221ENST00000593026 PROSER2Q86WR7 435 aaPredicted RBP21.49■■□□□ 1.03
DDX39A-221ENST00000593026 TMEM132EQ6IEE7 984 aa21.47■■□□□ 1.03
DDX39A-221ENST00000593026 TMEM94Q12767 1356 aa21.47■■□□□ 1.03
DDX39A-221ENST00000593026 KIAA1210Q9ULL0 1709 aa21.45■■□□□ 1.02
DDX39A-221ENST00000593026 XIRP1Q702N8 1843 aaKnown RBP21.45■■□□□ 1.02
DDX39A-221ENST00000593026 LRPPRCP42704 1394 aaKnown RBP21.45■■□□□ 1.02
DDX39A-221ENST00000593026 ADGRB1O14514 1584 aa21.44■■□□□ 1.02
DDX39A-221ENST00000593026 RBM33Q96EV2 1170 aaKnown RBP21.44■■□□□ 1.02
DDX39A-221ENST00000593026 PTCH1Q13635 1447 aa21.44■■□□□ 1.02
DDX39A-221ENST00000593026 YTHDC2Q9H6S0 1430 aaKnown RBP21.44■■□□□ 1.02
DDX39A-221ENST00000593026 STK26Q9P289 416 aa21.43■■□□□ 1.02
DDX39A-221ENST00000593026 KNDC1Q76NI1 1749 aa21.42■■□□□ 1.02
DDX39A-221ENST00000593026 TECPR2O15040 1411 aa21.41■■□□□ 1.02
DDX39A-221ENST00000593026 ABCC11Q96J66 1382 aa21.41■■□□□ 1.02
DDX39A-221ENST00000593026 NCOA3Q9Y6Q9 1424 aa21.4■■□□□ 1.02
DDX39A-221ENST00000593026 ROBO2Q9HCK4 1378 aa21.4■■□□□ 1.02
DDX39A-221ENST00000593026 C14orf37Q86TY3 774 aa21.39■■□□□ 1.01
DDX39A-221ENST00000593026 TIMELESSQ9UNS1 1208 aa21.39■■□□□ 1.01
DDX39A-221ENST00000593026 TRPM1Q7Z4N2 1603 aa21.39■■□□□ 1.01
DDX39A-221ENST00000593026 UBAP1LF5GYI3 381 aa21.37■■□□□ 1.01
DDX39A-221ENST00000593026 MSH6P52701 1360 aa21.36■■□□□ 1.01
DDX39A-221ENST00000593026 NBPF1Q3BBV0 1214 aa21.36■■□□□ 1.01
DDX39A-221ENST00000593026 NBPF8Q3BBV2 869 aa21.36■■□□□ 1.01
DDX39A-221ENST00000593026 DLC1Q96QB1 1528 aa21.35■■□□□ 1.01
DDX39A-221ENST00000593026 FAM135BQ49AJ0 1406 aa21.35■■□□□ 1.01
DDX39A-221ENST00000593026 TRAK1Q9UPV9 953 aa21.34■■□□□ 1.01
DDX39A-221ENST00000593026 NALCNQ8IZF0 1738 aa21.33■■□□□ 1.01
DDX39A-221ENST00000593026 ADGRL3Q9HAR2 1447 aa21.33■■□□□ 1.01
DDX39A-221ENST00000593026 TOM1O60784 492 aa21.33■■□□□ 1.01
DDX39A-221ENST00000593026 SIRT1Q96EB6 747 aa21.33■■□□□ 1.01
DDX39A-221ENST00000593026 ROCK2O75116 1388 aaKnown RBP21.33■■□□□ 1
DDX39A-221ENST00000593026 WAPLQ7Z5K2 1190 aa21.32■■□□□ 1
DDX39A-221ENST00000593026 C19orf44Q9H6X5 657 aa21.32■■□□□ 1
DDX39A-221ENST00000593026 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.32■■□□□ 1
DDX39A-221ENST00000593026 RALGAPBQ86X10 1494 aa21.32■■□□□ 1
DDX39A-221ENST00000593026 PLEKHH1Q9ULM0 1364 aa21.31■■□□□ 1
DDX39A-221ENST00000593026 ARHGEF28Q8N1W1 1705 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms