RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 HDGFP51858 240 aaKnown RBP20.28■□□□□ 0.84
APOC1-209ENST00000592885 NUP155O75694 1391 aa20.28■□□□□ 0.84
APOC1-209ENST00000592885 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.84
APOC1-209ENST00000592885 MED1Q15648 1581 aaPredicted RBP20.27■□□□□ 0.84
APOC1-209ENST00000592885 KCNA6P17658 529 aa20.27■□□□□ 0.84
APOC1-209ENST00000592885 DIP2AQ14689 1571 aa20.26■□□□□ 0.83
APOC1-209ENST00000592885 SPHKAPQ2M3C7 1700 aa20.26■□□□□ 0.83
APOC1-209ENST00000592885 ILDR2Q71H61 639 aa20.25■□□□□ 0.83
APOC1-209ENST00000592885 ITGAEP38570 1179 aa20.24■□□□□ 0.83
APOC1-209ENST00000592885 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.24■□□□□ 0.83
APOC1-209ENST00000592885 CHD2O14647 1828 aaKnown RBP20.24■□□□□ 0.83
APOC1-209ENST00000592885 TMEM94Q12767 1356 aa20.23■□□□□ 0.83
APOC1-209ENST00000592885 SLC26A8Q96RN1 970 aa20.23■□□□□ 0.83
APOC1-209ENST00000592885 PPP1R15AO75807 674 aaPredicted RBP20.22■□□□□ 0.83
APOC1-209ENST00000592885 PPARGC1BQ86YN6 1023 aaKnown RBP20.21■□□□□ 0.83
APOC1-209ENST00000592885 FAM135BQ49AJ0 1406 aa20.19■□□□□ 0.82
APOC1-209ENST00000592885 SOCS7O14512 581 aa20.19■□□□□ 0.82
APOC1-209ENST00000592885 BCANQ96GW7 911 aa20.19■□□□□ 0.82
APOC1-209ENST00000592885 PIK3R4Q99570 1358 aa20.18■□□□□ 0.82
APOC1-209ENST00000592885 NAIPQ13075 1403 aa20.18■□□□□ 0.82
APOC1-209ENST00000592885 PROSER2Q86WR7 435 aaPredicted RBP20.17■□□□□ 0.82
APOC1-209ENST00000592885 CHGAP10645 457 aaKnown RBP20.16■□□□□ 0.82
APOC1-209ENST00000592885 TBX22Q9Y458 520 aa20.16■□□□□ 0.82
APOC1-209ENST00000592885 ADAMTS13Q76LX8 1427 aa20.16■□□□□ 0.82
APOC1-209ENST00000592885 NCOA3Q9Y6Q9 1424 aa20.16■□□□□ 0.82
APOC1-209ENST00000592885 TRPM2O94759 1503 aa20.16■□□□□ 0.82
APOC1-209ENST00000592885 MSH6P52701 1360 aa20.15■□□□□ 0.82
APOC1-209ENST00000592885 ROBO1Q9Y6N7 1651 aa20.15■□□□□ 0.82
APOC1-209ENST00000592885 HFM1A2PYH4 1435 aa20.14■□□□□ 0.81
APOC1-209ENST00000592885 SETBP1Q9Y6X0 1596 aa20.12■□□□□ 0.81
APOC1-209ENST00000592885 CLTCL1P53675 1640 aa20.12■□□□□ 0.81
APOC1-209ENST00000592885 NRXN3Q9Y4C0 1643 aa20.1■□□□□ 0.81
APOC1-209ENST00000592885 KIF1BO60333 1816 aa20.1■□□□□ 0.81
APOC1-209ENST00000592885 XRN1Q8IZH2 1706 aaKnown RBP20.07■□□□□ 0.8
APOC1-209ENST00000592885 NEXMIFQ5QGS0 1516 aa20.07■□□□□ 0.8
APOC1-209ENST00000592885 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
APOC1-209ENST00000592885 NUTM2DQ5VT03 806 aaPredicted RBP20.05■□□□□ 0.8
APOC1-209ENST00000592885 RBM33Q96EV2 1170 aaKnown RBP20.05■□□□□ 0.8
APOC1-209ENST00000592885 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.05■□□□□ 0.8
APOC1-209ENST00000592885 SENP3Q9H4L4 574 aaPredicted RBP20.04■□□□□ 0.8
APOC1-209ENST00000592885 PHLPP1O60346 1717 aa20.04■□□□□ 0.8
APOC1-209ENST00000592885 SLAIN2Q9P270 581 aa20.02■□□□□ 0.8
APOC1-209ENST00000592885 DCCP43146 1447 aa20.02■□□□□ 0.79
APOC1-209ENST00000592885 PTPRUQ92729 1446 aa20.02■□□□□ 0.79
APOC1-209ENST00000592885 ZNF326Q5BKZ1 582 aaKnown RBP20.01■□□□□ 0.79
APOC1-209ENST00000592885 CADPS2Q86UW7 1296 aa19.99■□□□□ 0.79
APOC1-209ENST00000592885 AMOTL2Q9Y2J4 779 aa19.99■□□□□ 0.79
APOC1-209ENST00000592885 COL16A1Q07092 1604 aaPredicted RBP19.98■□□□□ 0.79
APOC1-209ENST00000592885 AHDC1Q5TGY3 1603 aaPredicted RBP19.98■□□□□ 0.79
APOC1-209ENST00000592885 C14orf37Q86TY3 774 aa19.98■□□□□ 0.79
APOC1-209ENST00000592885 C19orf44Q9H6X5 657 aa19.98■□□□□ 0.79
APOC1-209ENST00000592885 TRIM52Q96A61 297 aa19.97■□□□□ 0.79
APOC1-209ENST00000592885 SETD1AO15047 1707 aaKnown RBP19.96■□□□□ 0.79
APOC1-209ENST00000592885 PPLO60437 1756 aa19.95■□□□□ 0.78
APOC1-209ENST00000592885 ATF3P18847 181 aa19.95■□□□□ 0.78
APOC1-209ENST00000592885 SLC4A1APQ9BWU0 796 aaKnown RBP19.95■□□□□ 0.78
APOC1-209ENST00000592885 JCADQ9P266 1359 aa19.95■□□□□ 0.78
APOC1-209ENST00000592885 METP08581 1390 aa19.94■□□□□ 0.78
APOC1-209ENST00000592885 RPGRIP1LQ68CZ1 1315 aa19.93■□□□□ 0.78
APOC1-209ENST00000592885 PRAG1Q86YV5 1406 aa19.93■□□□□ 0.78
APOC1-209ENST00000592885 ACIN1Q9UKV3 1341 aaKnown RBP19.92■□□□□ 0.78
APOC1-209ENST00000592885 PTCH1Q13635 1447 aa19.92■□□□□ 0.78
APOC1-209ENST00000592885 SHPRHQ149N8 1683 aa19.91■□□□□ 0.78
APOC1-209ENST00000592885 VGFO15240 615 aaPredicted RBP19.91■□□□□ 0.78
APOC1-209ENST00000592885 ADGRL3Q9HAR2 1447 aa19.91■□□□□ 0.78
APOC1-209ENST00000592885 NALCNQ8IZF0 1738 aa19.9■□□□□ 0.78
APOC1-209ENST00000592885 ASXL1Q8IXJ9 1541 aa19.88■□□□□ 0.77
APOC1-209ENST00000592885 MST1RQ04912 1400 aa19.88■□□□□ 0.77
APOC1-209ENST00000592885 NHSL1Q5SYE7 1610 aa19.87■□□□□ 0.77
APOC1-209ENST00000592885 CCDC144AA2RUR9 1427 aa19.87■□□□□ 0.77
APOC1-209ENST00000592885 SPATA31A6Q5VVP1 1343 aa19.86■□□□□ 0.77
APOC1-209ENST00000592885 IFT172Q9UG01 1749 aa19.86■□□□□ 0.77
APOC1-209ENST00000592885 RGS17Q9UGC6 210 aaPredicted RBP19.86■□□□□ 0.77
APOC1-209ENST00000592885 BRINP3Q76B58 766 aa19.84■□□□□ 0.77
APOC1-209ENST00000592885 SPATA31E1Q6ZUB1 1445 aa19.82■□□□□ 0.76
APOC1-209ENST00000592885 LAMC1P11047 1609 aa19.81■□□□□ 0.76
APOC1-209ENST00000592885 MPHOSPH9Q99550 1183 aa19.81■□□□□ 0.76
APOC1-209ENST00000592885 ANKRD30BQ9BXX2 1392 aa19.81■□□□□ 0.76
APOC1-209ENST00000592885 LRP6O75581 1613 aa19.8■□□□□ 0.76
APOC1-209ENST00000592885 SETD5Q9C0A6 1442 aa19.8■□□□□ 0.76
APOC1-209ENST00000592885 ROBO2Q9HCK4 1378 aa19.79■□□□□ 0.76
APOC1-209ENST00000592885 FOXD1Q16676 465 aa19.78■□□□□ 0.76
APOC1-209ENST00000592885 KNDC1Q76NI1 1749 aa19.78■□□□□ 0.76
APOC1-209ENST00000592885 CDC42BPGQ6DT37 1551 aa19.77■□□□□ 0.76
APOC1-209ENST00000592885 C1orf167Q5SNV9 1468 aa19.76■□□□□ 0.75
APOC1-209ENST00000592885 TECPR2O15040 1411 aa19.76■□□□□ 0.75
APOC1-209ENST00000592885 POTEAQ6S8J7 498 aa19.75■□□□□ 0.75
APOC1-209ENST00000592885 PIK3C2GO75747 1445 aa19.75■□□□□ 0.75
APOC1-209ENST00000592885 MEX3CQ5U5Q3 659 aaKnown RBP19.72■□□□□ 0.75
APOC1-209ENST00000592885 LRRC59Q96AG4 307 aaKnown RBP19.72■□□□□ 0.75
APOC1-209ENST00000592885 ADGRF5Q8IZF2 1346 aa19.72■□□□□ 0.75
APOC1-209ENST00000592885 MYOM2P54296 1465 aa19.71■□□□□ 0.75
APOC1-209ENST00000592885 LRPPRCP42704 1394 aaKnown RBP19.7■□□□□ 0.74
APOC1-209ENST00000592885 ZNF772Q68DY9 489 aaPredicted RBP19.7■□□□□ 0.74
APOC1-209ENST00000592885 RAB3GAP2Q9H2M9 1393 aa19.7■□□□□ 0.74
APOC1-209ENST00000592885 NRXN1Q9ULB1 1477 aa19.69■□□□□ 0.74
APOC1-209ENST00000592885 RGL3Q3MIN7 710 aa19.69■□□□□ 0.74
APOC1-209ENST00000592885 PNPLA6Q8IY17 1366 aa19.69■□□□□ 0.74
APOC1-209ENST00000592885 ABCC11Q96J66 1382 aa19.68■□□□□ 0.74
APOC1-209ENST00000592885 SOS2Q07890 1332 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms