RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 SPATA31E1Q6ZUB1 1445 aa14.58□□□□□ -0.07
TPM4-216ENST00000592822 DMRT2Q9Y5R5 561 aa14.58□□□□□ -0.08
TPM4-216ENST00000592822 EID1Q9Y6B2 187 aa14.58□□□□□ -0.08
TPM4-216ENST00000592822 NPHP4O75161 1426 aaPredicted RBP14.58□□□□□ -0.08
TPM4-216ENST00000592822 ZNF326Q5BKZ1 582 aaKnown RBP14.57□□□□□ -0.08
TPM4-216ENST00000592822 NEXMIFQ5QGS0 1516 aa14.56□□□□□ -0.08
TPM4-216ENST00000592822 IQGAP1P46940 1657 aa14.56□□□□□ -0.08
TPM4-216ENST00000592822 NUTM2DQ5VT03 806 aaPredicted RBP14.56□□□□□ -0.08
TPM4-216ENST00000592822 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.55□□□□□ -0.08
TPM4-216ENST00000592822 HDGFP51858 240 aaKnown RBP14.54□□□□□ -0.08
TPM4-216ENST00000592822 RGL3Q3MIN7 710 aa14.54□□□□□ -0.08
TPM4-216ENST00000592822 PPLO60437 1756 aa14.54□□□□□ -0.08
TPM4-216ENST00000592822 IFT172Q9UG01 1749 aa14.53□□□□□ -0.08
TPM4-216ENST00000592822 PLEKHG1Q9ULL1 1385 aa14.53□□□□□ -0.08
TPM4-216ENST00000592822 RPGRIP1LQ68CZ1 1315 aa14.52□□□□□ -0.08
TPM4-216ENST00000592822 PPP1R15AO75807 674 aaPredicted RBP14.52□□□□□ -0.09
TPM4-216ENST00000592822 SENP3Q9H4L4 574 aaPredicted RBP14.52□□□□□ -0.09
TPM4-216ENST00000592822 SIN3AQ96ST3 1273 aa14.5□□□□□ -0.09
TPM4-216ENST00000592822 NRXN3Q9Y4C0 1643 aa14.48□□□□□ -0.09
TPM4-216ENST00000592822 SETBP1Q9Y6X0 1596 aa14.48□□□□□ -0.09
TPM4-216ENST00000592822 VGFO15240 615 aaPredicted RBP14.48□□□□□ -0.09
TPM4-216ENST00000592822 BCANQ96GW7 911 aa14.48□□□□□ -0.09
TPM4-216ENST00000592822 SLC26A8Q96RN1 970 aa14.48□□□□□ -0.09
TPM4-216ENST00000592822 ADAMTS13Q76LX8 1427 aa14.48□□□□□ -0.09
TPM4-216ENST00000592822 ZNF335Q9H4Z2 1342 aaPredicted RBP14.47□□□□□ -0.09
TPM4-216ENST00000592822 ADGRF5Q8IZF2 1346 aa14.46□□□□□ -0.09
TPM4-216ENST00000592822 LTBP4Q8N2S1 1624 aa14.45□□□□□ -0.1
TPM4-216ENST00000592822 STRCP1A6NGW2 1772 aa14.45□□□□□ -0.1
TPM4-216ENST00000592822 NEUROD1Q13562 356 aa14.45□□□□□ -0.1
TPM4-216ENST00000592822 DIP2AQ14689 1571 aa14.45□□□□□ -0.1
TPM4-216ENST00000592822 TBX22Q9Y458 520 aa14.45□□□□□ -0.1
TPM4-216ENST00000592822 MYOM2P54296 1465 aa14.44□□□□□ -0.1
TPM4-216ENST00000592822 NRXN1Q9ULB1 1477 aa14.44□□□□□ -0.1
TPM4-216ENST00000592822 DCAF11Q8TEB1 546 aa14.43□□□□□ -0.1
TPM4-216ENST00000592822 ALKQ9UM73 1620 aa14.43□□□□□ -0.1
TPM4-216ENST00000592822 SETD1AO15047 1707 aaKnown RBP14.43□□□□□ -0.1
TPM4-216ENST00000592822 PIK3C2GO75747 1445 aa14.42□□□□□ -0.1
TPM4-216ENST00000592822 CHD2O14647 1828 aaKnown RBP14.42□□□□□ -0.1
TPM4-216ENST00000592822 KDM2AQ9Y2K7 1162 aa14.41□□□□□ -0.1
TPM4-216ENST00000592822 NWD1Q149M9 1564 aa14.4□□□□□ -0.1
TPM4-216ENST00000592822 METP08581 1390 aa14.4□□□□□ -0.1
TPM4-216ENST00000592822 L3MBTL2Q969R5 705 aa14.4□□□□□ -0.1
TPM4-216ENST00000592822 STAC3Q96MF2 364 aa14.4□□□□□ -0.1
TPM4-216ENST00000592822 PIK3R4Q99570 1358 aa14.39□□□□□ -0.11
TPM4-216ENST00000592822 KCNA6P17658 529 aa14.39□□□□□ -0.11
TPM4-216ENST00000592822 CCER1Q8TC90 406 aaPredicted RBP14.39□□□□□ -0.11
TPM4-216ENST00000592822 PTPRUQ92729 1446 aa14.39□□□□□ -0.11
TPM4-216ENST00000592822 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
TPM4-216ENST00000592822 CPS1P31327 1500 aa14.38□□□□□ -0.11
TPM4-216ENST00000592822 C14orf93Q9H972 538 aaKnown RBP14.37□□□□□ -0.11
TPM4-216ENST00000592822 LAMC1P11047 1609 aa14.37□□□□□ -0.11
TPM4-216ENST00000592822 ASXL1Q8IXJ9 1541 aa14.36□□□□□ -0.11
TPM4-216ENST00000592822 XRN1Q8IZH2 1706 aaKnown RBP14.36□□□□□ -0.11
TPM4-216ENST00000592822 CFAP70Q5T0N1 1121 aa14.36□□□□□ -0.11
TPM4-216ENST00000592822 CERKQ8TCT0 537 aa14.36□□□□□ -0.11
TPM4-216ENST00000592822 LRRC7Q96NW7 1537 aa14.36□□□□□ -0.11
TPM4-216ENST00000592822 AMOTL2Q9Y2J4 779 aa14.35□□□□□ -0.11
TPM4-216ENST00000592822 NKTRP30414 1462 aaKnown RBP14.35□□□□□ -0.11
TPM4-216ENST00000592822 TONSLQ96HA7 1378 aa14.34□□□□□ -0.11
TPM4-216ENST00000592822 XIRP1Q702N8 1843 aaKnown RBP14.34□□□□□ -0.11
TPM4-216ENST00000592822 PRAG1Q86YV5 1406 aa14.34□□□□□ -0.11
TPM4-216ENST00000592822 TMEM132EQ6IEE7 984 aa14.34□□□□□ -0.11
TPM4-216ENST00000592822 KIAA1210Q9ULL0 1709 aa14.32□□□□□ -0.12
TPM4-216ENST00000592822 PROSER2Q86WR7 435 aaPredicted RBP14.32□□□□□ -0.12
TPM4-216ENST00000592822 ADGRB1O14514 1584 aa14.31□□□□□ -0.12
TPM4-216ENST00000592822 RBM33Q96EV2 1170 aaKnown RBP14.31□□□□□ -0.12
TPM4-216ENST00000592822 LRPPRCP42704 1394 aaKnown RBP14.31□□□□□ -0.12
TPM4-216ENST00000592822 TMEM94Q12767 1356 aa14.31□□□□□ -0.12
TPM4-216ENST00000592822 IQSEC2Q5JU85 1478 aa14.31□□□□□ -0.12
TPM4-216ENST00000592822 STK26Q9P289 416 aa14.3□□□□□ -0.12
TPM4-216ENST00000592822 YTHDC2Q9H6S0 1430 aaKnown RBP14.3□□□□□ -0.12
TPM4-216ENST00000592822 NBPF8Q3BBV2 869 aa14.29□□□□□ -0.12
TPM4-216ENST00000592822 ROBO2Q9HCK4 1378 aa14.29□□□□□ -0.12
TPM4-216ENST00000592822 TRPM1Q7Z4N2 1603 aa14.29□□□□□ -0.12
TPM4-216ENST00000592822 KNDC1Q76NI1 1749 aa14.29□□□□□ -0.12
TPM4-216ENST00000592822 TECPR2O15040 1411 aa14.28□□□□□ -0.12
TPM4-216ENST00000592822 PTCH1Q13635 1447 aa14.28□□□□□ -0.12
TPM4-216ENST00000592822 NBPF1Q3BBV0 1214 aa14.28□□□□□ -0.12
TPM4-216ENST00000592822 ABCC11Q96J66 1382 aa14.28□□□□□ -0.12
TPM4-216ENST00000592822 TIMELESSQ9UNS1 1208 aa14.27□□□□□ -0.13
TPM4-216ENST00000592822 NCOA3Q9Y6Q9 1424 aa14.25□□□□□ -0.13
TPM4-216ENST00000592822 SIRT1Q96EB6 747 aa14.24□□□□□ -0.13
TPM4-216ENST00000592822 DLC1Q96QB1 1528 aa14.24□□□□□ -0.13
TPM4-216ENST00000592822 NALCNQ8IZF0 1738 aa14.24□□□□□ -0.13
TPM4-216ENST00000592822 PLEKHH1Q9ULM0 1364 aa14.23□□□□□ -0.13
TPM4-216ENST00000592822 WAPLQ7Z5K2 1190 aa14.23□□□□□ -0.13
TPM4-216ENST00000592822 TRAK1Q9UPV9 953 aa14.23□□□□□ -0.13
TPM4-216ENST00000592822 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.23□□□□□ -0.13
TPM4-216ENST00000592822 FAM135BQ49AJ0 1406 aa14.23□□□□□ -0.13
TPM4-216ENST00000592822 C14orf37Q86TY3 774 aa14.22□□□□□ -0.13
TPM4-216ENST00000592822 RALGAPBQ86X10 1494 aa14.22□□□□□ -0.13
TPM4-216ENST00000592822 ARHGEF28Q8N1W1 1705 aaKnown RBP14.21□□□□□ -0.13
TPM4-216ENST00000592822 C19orf44Q9H6X5 657 aa14.21□□□□□ -0.13
TPM4-216ENST00000592822 ADGRL3Q9HAR2 1447 aa14.21□□□□□ -0.13
TPM4-216ENST00000592822 ROCK2O75116 1388 aaKnown RBP14.21□□□□□ -0.14
TPM4-216ENST00000592822 MSH6P52701 1360 aa14.21□□□□□ -0.14
TPM4-216ENST00000592822 GPRASP1Q5JY77 1395 aa14.21□□□□□ -0.14
TPM4-216ENST00000592822 UBAP1LF5GYI3 381 aa14.2□□□□□ -0.14
TPM4-216ENST00000592822 PRAM1Q96QH2 718 aa14.2□□□□□ -0.14
TPM4-216ENST00000592822 TOM1O60784 492 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms