RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 HECW2Q9P2P5 1572 aa22.26■■□□□ 1.15
PRKCSH-217ENST00000592741 MLH3Q9UHC1 1453 aa22.26■■□□□ 1.15
PRKCSH-217ENST00000592741 IFT172Q9UG01 1749 aa22.25■■□□□ 1.15
PRKCSH-217ENST00000592741 RBM19Q9Y4C8 960 aaKnown RBP22.25■■□□□ 1.15
PRKCSH-217ENST00000592741 ABCA6Q8N139 1617 aa22.24■■□□□ 1.15
PRKCSH-217ENST00000592741 INSRP06213 1382 aa22.24■■□□□ 1.15
PRKCSH-217ENST00000592741 ZMYM4Q5VZL5 1548 aa22.24■■□□□ 1.15
PRKCSH-217ENST00000592741 MROH2AA6NES4 1674 aa22.23■■□□□ 1.15
PRKCSH-217ENST00000592741 SENP3-EIF4A1A0A087X0R7 540 aa22.22■■□□□ 1.15
PRKCSH-217ENST00000592741 FRMPD1Q5SYB0 1578 aa22.22■■□□□ 1.15
PRKCSH-217ENST00000592741 KNSTRNQ9Y448 316 aa22.2■■□□□ 1.14
PRKCSH-217ENST00000592741 ADGRB3O60242 1522 aa22.2■■□□□ 1.14
PRKCSH-217ENST00000592741 KDM5AP29375 1690 aaKnown RBP22.2■■□□□ 1.14
PRKCSH-217ENST00000592741 B4GALNT3Q6L9W6 998 aa22.19■■□□□ 1.14
PRKCSH-217ENST00000592741 SLC24A1O60721 1099 aa22.19■■□□□ 1.14
PRKCSH-217ENST00000592741 MYT1Q01538 1121 aa22.19■■□□□ 1.14
PRKCSH-217ENST00000592741 NEO1Q92859 1461 aa22.18■■□□□ 1.14
PRKCSH-217ENST00000592741 NRXN1Q9ULB1 1477 aa22.18■■□□□ 1.14
PRKCSH-217ENST00000592741 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
PRKCSH-217ENST00000592741 PDE3BQ13370 1112 aa22.18■■□□□ 1.14
PRKCSH-217ENST00000592741 MYOM1P52179 1685 aa22.18■■□□□ 1.14
PRKCSH-217ENST00000592741 ADGRF5Q8IZF2 1346 aa22.18■■□□□ 1.14
PRKCSH-217ENST00000592741 CFAP70Q5T0N1 1121 aa22.17■■□□□ 1.14
PRKCSH-217ENST00000592741 ASXL1Q8IXJ9 1541 aa22.15■■□□□ 1.14
PRKCSH-217ENST00000592741 NPATQ14207 1427 aa22.15■■□□□ 1.14
PRKCSH-217ENST00000592741 AMER1Q5JTC6 1135 aaPredicted RBP22.13■■□□□ 1.13
PRKCSH-217ENST00000592741 GGT6Q6P531 493 aa22.13■■□□□ 1.13
PRKCSH-217ENST00000592741 ABCC3O15438 1527 aa22.13■■□□□ 1.13
PRKCSH-217ENST00000592741 NOS1P29475 1434 aa22.12■■□□□ 1.13
PRKCSH-217ENST00000592741 MYO3AQ8NEV4 1616 aa22.12■■□□□ 1.13
PRKCSH-217ENST00000592741 SETBP1Q9Y6X0 1596 aa22.11■■□□□ 1.13
PRKCSH-217ENST00000592741 SALL2Q9Y467 1007 aaPredicted RBP22.11■■□□□ 1.13
PRKCSH-217ENST00000592741 NPC1L1Q9UHC9 1359 aa22.11■■□□□ 1.13
PRKCSH-217ENST00000592741 PPLO60437 1756 aa22.11■■□□□ 1.13
PRKCSH-217ENST00000592741 ERVK-7P63135 1459 aa22.1■■□□□ 1.13
PRKCSH-217ENST00000592741 CHGAP10645 457 aaKnown RBP22.1■■□□□ 1.13
PRKCSH-217ENST00000592741 PPP2R1AP30153 589 aa22.1■■□□□ 1.13
PRKCSH-217ENST00000592741 CAMSAP1Q5T5Y3 1602 aa22.09■■□□□ 1.13
PRKCSH-217ENST00000592741 RCAN3Q9UKA8 241 aa22.07■■□□□ 1.12
PRKCSH-217ENST00000592741 SBNO2Q9Y2G9 1366 aa22.07■■□□□ 1.12
PRKCSH-217ENST00000592741 DIP2CQ9Y2E4 1556 aa22.07■■□□□ 1.12
PRKCSH-217ENST00000592741 RRP1P56182 461 aaKnown RBP22.07■■□□□ 1.12
PRKCSH-217ENST00000592741 PIK3C2GO75747 1445 aa22.06■■□□□ 1.12
PRKCSH-217ENST00000592741 CFAP65Q6ZU64 1925 aaKnown RBP22.06■■□□□ 1.12
PRKCSH-217ENST00000592741 CCDC136Q96JN2 1154 aa22.06■■□□□ 1.12
PRKCSH-217ENST00000592741 RPGRIP1LQ68CZ1 1315 aa22.06■■□□□ 1.12
PRKCSH-217ENST00000592741 RAPGEF3O95398 923 aa22.05■■□□□ 1.12
PRKCSH-217ENST00000592741 WDR43Q15061 677 aaKnown RBP eCLIP22.04■■□□□ 1.121e-7■■■□□ 17.1
PRKCSH-217ENST00000592741 RICTORQ6R327 1708 aa22.04■■□□□ 1.12
PRKCSH-217ENST00000592741 ADAMTS8Q9UP79 889 aa22.03■■□□□ 1.12
PRKCSH-217ENST00000592741 CENPJQ9HC77 1338 aaPredicted RBP22.02■■□□□ 1.12
PRKCSH-217ENST00000592741 ZC3H13Q5T200 1668 aaKnown RBP22.02■■□□□ 1.12
PRKCSH-217ENST00000592741 C14orf93Q9H972 538 aaKnown RBP22.01■■□□□ 1.11
PRKCSH-217ENST00000592741 SIGLEC1Q9BZZ2 1709 aa22.01■■□□□ 1.11
PRKCSH-217ENST00000592741 PIK3C2BO00750 1634 aa22■■□□□ 1.11
PRKCSH-217ENST00000592741 CDCA7LQ96GN5 454 aa22■■□□□ 1.11
PRKCSH-217ENST00000592741 ADGRB1O14514 1584 aa21.99■■□□□ 1.11
PRKCSH-217ENST00000592741 FANCIQ9NVI1 1328 aa21.99■■□□□ 1.11
PRKCSH-217ENST00000592741 QRICH2Q9H0J4 1663 aa21.99■■□□□ 1.11
PRKCSH-217ENST00000592741 ARHGAP31Q2M1Z3 1444 aa21.98■■□□□ 1.11
PRKCSH-217ENST00000592741 GLI2P10070 1586 aa21.96■■□□□ 1.11
PRKCSH-217ENST00000592741 ANP32EQ9BTT0 268 aa21.95■■□□□ 1.11
PRKCSH-217ENST00000592741 TRAK1Q9UPV9 953 aa21.95■■□□□ 1.11
PRKCSH-217ENST00000592741 NEXMIFQ5QGS0 1516 aa21.94■■□□□ 1.1
PRKCSH-217ENST00000592741 CARD14Q9BXL6 1004 aa21.93■■□□□ 1.1
PRKCSH-217ENST00000592741 YEATS2Q9ULM3 1422 aa21.92■■□□□ 1.1
PRKCSH-217ENST00000592741 VGFO15240 615 aaPredicted RBP21.91■■□□□ 1.1
PRKCSH-217ENST00000592741 EXOC6Q8TAG9 804 aa21.91■■□□□ 1.1
PRKCSH-217ENST00000592741 PLEKHH1Q9ULM0 1364 aa21.9■■□□□ 1.1
PRKCSH-217ENST00000592741 TMEM132EQ6IEE7 984 aa21.89■■□□□ 1.1
PRKCSH-217ENST00000592741 NSD3Q9BZ95 1437 aa21.87■■□□□ 1.09
PRKCSH-217ENST00000592741 ZNF521Q96K83 1311 aa21.87■■□□□ 1.09
PRKCSH-217ENST00000592741 SLC52A1Q9NWF4 448 aa21.87■■□□□ 1.09
PRKCSH-217ENST00000592741 ARHGEF28Q8N1W1 1705 aaKnown RBP21.87■■□□□ 1.09
PRKCSH-217ENST00000592741 CYB5RLQ6IPT4 315 aa21.86■■□□□ 1.09
PRKCSH-217ENST00000592741 PREX1Q8TCU6 1659 aa21.85■■□□□ 1.09
PRKCSH-217ENST00000592741 ZFYVE9O95405 1425 aa21.85■■□□□ 1.09
PRKCSH-217ENST00000592741 USP32Q8NFA0 1604 aa21.85■■□□□ 1.09
PRKCSH-217ENST00000592741 GOLGA2Q08379 1002 aa21.85■■□□□ 1.09
PRKCSH-217ENST00000592741 IDI1Q13907 227 aa21.84■■□□□ 1.09
PRKCSH-217ENST00000592741 NUTM2DQ5VT03 806 aaPredicted RBP21.83■■□□□ 1.09
PRKCSH-217ENST00000592741 PUS7Q96PZ0 661 aaKnown RBP21.83■■□□□ 1.09
PRKCSH-217ENST00000592741 DUSP27Q5VZP5 1158 aa21.83■■□□□ 1.08
PRKCSH-217ENST00000592741 POLR3AO14802 1390 aaPredicted RBP21.83■■□□□ 1.08
PRKCSH-217ENST00000592741 MSH5O43196 834 aa21.82■■□□□ 1.08
PRKCSH-217ENST00000592741 EVC2Q86UK5 1308 aa21.82■■□□□ 1.08
PRKCSH-217ENST00000592741 CCDC146Q8IYE0 955 aa21.82■■□□□ 1.08
PRKCSH-217ENST00000592741 SLC12A5Q9H2X9 1139 aa21.82■■□□□ 1.08
PRKCSH-217ENST00000592741 DIP2BQ9P265 1576 aa21.81■■□□□ 1.08
PRKCSH-217ENST00000592741 RIMBP3CA6NJZ7 1639 aa21.81■■□□□ 1.08
PRKCSH-217ENST00000592741 RIMBP3BA6NNM3 1639 aa21.81■■□□□ 1.08
PRKCSH-217ENST00000592741 RIMBP3Q9UFD9 1639 aa21.81■■□□□ 1.08
PRKCSH-217ENST00000592741 PLIN1O60240 522 aa21.8■■□□□ 1.08
PRKCSH-217ENST00000592741 MORC1Q86VD1 984 aa21.8■■□□□ 1.08
PRKCSH-217ENST00000592741 TMEM131LA2VDJ0 1609 aa21.8■■□□□ 1.08
PRKCSH-217ENST00000592741 TULP4Q9NRJ4 1543 aa21.8■■□□□ 1.08
PRKCSH-217ENST00000592741 MYO5BQ9ULV0 1848 aa21.8■■□□□ 1.08
PRKCSH-217ENST00000592741 NGEFQ8N5V2 710 aa21.79■■□□□ 1.08
PRKCSH-217ENST00000592741 FAM69CQ0P6D2 419 aa21.79■■□□□ 1.08
PRKCSH-217ENST00000592741 SLFN5Q08AF3 891 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms