RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 NWD1Q149M9 1564 aa20.7■□□□□ 0.9
CAPNS1-213ENST00000592354 ZFYVE9O95405 1425 aa20.7■□□□□ 0.9
CAPNS1-213ENST00000592354 SLC26A8Q96RN1 970 aa20.69■□□□□ 0.9
CAPNS1-213ENST00000592354 SPHKAPQ2M3C7 1700 aa20.67■□□□□ 0.9
CAPNS1-213ENST00000592354 RIMS2Q9UQ26 1411 aa20.66■□□□□ 0.9
CAPNS1-213ENST00000592354 NUP155O75694 1391 aa20.65■□□□□ 0.9
CAPNS1-213ENST00000592354 NKTRP30414 1462 aaKnown RBP20.64■□□□□ 0.89
CAPNS1-213ENST00000592354 TMEM94Q12767 1356 aa20.64■□□□□ 0.89
CAPNS1-213ENST00000592354 BCANQ96GW7 911 aa20.64■□□□□ 0.89
CAPNS1-213ENST00000592354 CHD2O14647 1828 aaKnown RBP20.63■□□□□ 0.89
CAPNS1-213ENST00000592354 CHGAP10645 457 aaKnown RBP20.63■□□□□ 0.89
CAPNS1-213ENST00000592354 PLEKHG1Q9ULL1 1385 aa20.62■□□□□ 0.89
CAPNS1-213ENST00000592354 RRBP1Q9P2E9 1410 aaKnown RBP20.61■□□□□ 0.89
CAPNS1-213ENST00000592354 PPP1R15AO75807 674 aaPredicted RBP20.61■□□□□ 0.89
CAPNS1-213ENST00000592354 RBM33Q96EV2 1170 aaKnown RBP20.61■□□□□ 0.89
CAPNS1-213ENST00000592354 KCNA6P17658 529 aa20.6■□□□□ 0.89
CAPNS1-213ENST00000592354 ROBO1Q9Y6N7 1651 aa20.6■□□□□ 0.89
CAPNS1-213ENST00000592354 SOCS7O14512 581 aa20.58■□□□□ 0.89
CAPNS1-213ENST00000592354 NUTM2DQ5VT03 806 aaPredicted RBP20.58■□□□□ 0.89
CAPNS1-213ENST00000592354 DIP2AQ14689 1571 aa20.58■□□□□ 0.88
CAPNS1-213ENST00000592354 PROSER2Q86WR7 435 aaPredicted RBP20.57■□□□□ 0.88
CAPNS1-213ENST00000592354 CLTCL1P53675 1640 aa20.55■□□□□ 0.88
CAPNS1-213ENST00000592354 ADAMTS13Q76LX8 1427 aa20.54■□□□□ 0.88
CAPNS1-213ENST00000592354 NAIPQ13075 1403 aa20.53■□□□□ 0.88
CAPNS1-213ENST00000592354 NRXN3Q9Y4C0 1643 aa20.53■□□□□ 0.88
CAPNS1-213ENST00000592354 HDGFP51858 240 aaKnown RBP20.52■□□□□ 0.88
CAPNS1-213ENST00000592354 TRPM2O94759 1503 aa20.52■□□□□ 0.87
CAPNS1-213ENST00000592354 MSH6P52701 1360 aa20.51■□□□□ 0.87
CAPNS1-213ENST00000592354 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.51■□□□□ 0.87
CAPNS1-213ENST00000592354 FAM135BQ49AJ0 1406 aa20.5■□□□□ 0.87
CAPNS1-213ENST00000592354 KIF1BO60333 1816 aa20.49■□□□□ 0.87
CAPNS1-213ENST00000592354 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
CAPNS1-213ENST00000592354 PHLPP1O60346 1717 aa20.48■□□□□ 0.87
CAPNS1-213ENST00000592354 SETBP1Q9Y6X0 1596 aa20.47■□□□□ 0.87
CAPNS1-213ENST00000592354 TBX22Q9Y458 520 aa20.47■□□□□ 0.87
CAPNS1-213ENST00000592354 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.47■□□□□ 0.87
CAPNS1-213ENST00000592354 XRN1Q8IZH2 1706 aaKnown RBP20.46■□□□□ 0.87
CAPNS1-213ENST00000592354 NEXMIFQ5QGS0 1516 aa20.46■□□□□ 0.87
CAPNS1-213ENST00000592354 HFM1A2PYH4 1435 aa20.45■□□□□ 0.86
CAPNS1-213ENST00000592354 PIK3R4Q99570 1358 aa20.44■□□□□ 0.86
CAPNS1-213ENST00000592354 PTPRUQ92729 1446 aa20.44■□□□□ 0.86
CAPNS1-213ENST00000592354 ZNF326Q5BKZ1 582 aaKnown RBP20.43■□□□□ 0.86
CAPNS1-213ENST00000592354 C14orf37Q86TY3 774 aa20.42■□□□□ 0.86
CAPNS1-213ENST00000592354 COL16A1Q07092 1604 aaPredicted RBP20.4■□□□□ 0.86
CAPNS1-213ENST00000592354 NCOA3Q9Y6Q9 1424 aa20.39■□□□□ 0.85
CAPNS1-213ENST00000592354 TRIM52Q96A61 297 aa20.39■□□□□ 0.85
CAPNS1-213ENST00000592354 SLAIN2Q9P270 581 aa20.39■□□□□ 0.85
CAPNS1-213ENST00000592354 SETD1AO15047 1707 aaKnown RBP20.37■□□□□ 0.85
CAPNS1-213ENST00000592354 AMOTL2Q9Y2J4 779 aa20.37■□□□□ 0.85
CAPNS1-213ENST00000592354 NALCNQ8IZF0 1738 aa20.36■□□□□ 0.85
CAPNS1-213ENST00000592354 METP08581 1390 aa20.35■□□□□ 0.85
CAPNS1-213ENST00000592354 PPLO60437 1756 aa20.35■□□□□ 0.85
CAPNS1-213ENST00000592354 AHDC1Q5TGY3 1603 aaPredicted RBP20.34■□□□□ 0.85
CAPNS1-213ENST00000592354 SLC4A1APQ9BWU0 796 aaKnown RBP20.32■□□□□ 0.84
CAPNS1-213ENST00000592354 ATF3P18847 181 aa20.31■□□□□ 0.84
CAPNS1-213ENST00000592354 CADPS2Q86UW7 1296 aa20.31■□□□□ 0.84
CAPNS1-213ENST00000592354 C19orf44Q9H6X5 657 aa20.31■□□□□ 0.84
CAPNS1-213ENST00000592354 RGS17Q9UGC6 210 aaPredicted RBP20.31■□□□□ 0.84
CAPNS1-213ENST00000592354 SHPRHQ149N8 1683 aa20.29■□□□□ 0.84
CAPNS1-213ENST00000592354 DCCP43146 1447 aa20.29■□□□□ 0.84
CAPNS1-213ENST00000592354 JCADQ9P266 1359 aa20.29■□□□□ 0.84
CAPNS1-213ENST00000592354 ASXL1Q8IXJ9 1541 aa20.28■□□□□ 0.84
CAPNS1-213ENST00000592354 NHSL1Q5SYE7 1610 aa20.27■□□□□ 0.84
CAPNS1-213ENST00000592354 FOXD1Q16676 465 aa20.27■□□□□ 0.84
CAPNS1-213ENST00000592354 IFT172Q9UG01 1749 aa20.27■□□□□ 0.83
CAPNS1-213ENST00000592354 LRP6O75581 1613 aa20.26■□□□□ 0.83
CAPNS1-213ENST00000592354 MST1RQ04912 1400 aa20.26■□□□□ 0.83
CAPNS1-213ENST00000592354 ADGRL3Q9HAR2 1447 aa20.26■□□□□ 0.83
CAPNS1-213ENST00000592354 BRINP3Q76B58 766 aa20.23■□□□□ 0.83
CAPNS1-213ENST00000592354 CCDC144AA2RUR9 1427 aa20.22■□□□□ 0.83
CAPNS1-213ENST00000592354 PTCH1Q13635 1447 aa20.22■□□□□ 0.83
CAPNS1-213ENST00000592354 VGFO15240 615 aaPredicted RBP20.2■□□□□ 0.82
CAPNS1-213ENST00000592354 POTEAQ6S8J7 498 aa20.2■□□□□ 0.82
CAPNS1-213ENST00000592354 ROBO2Q9HCK4 1378 aa20.2■□□□□ 0.82
CAPNS1-213ENST00000592354 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
CAPNS1-213ENST00000592354 SPATA31A6Q5VVP1 1343 aa20.17■□□□□ 0.82
CAPNS1-213ENST00000592354 PRAG1Q86YV5 1406 aa20.17■□□□□ 0.82
CAPNS1-213ENST00000592354 MPHOSPH9Q99550 1183 aa20.16■□□□□ 0.82
CAPNS1-213ENST00000592354 SPATA31E1Q6ZUB1 1445 aa20.16■□□□□ 0.82
CAPNS1-213ENST00000592354 MEX3CQ5U5Q3 659 aaKnown RBP20.14■□□□□ 0.81
CAPNS1-213ENST00000592354 DDX17Q92841 729 aaKnown RBP20.14■□□□□ 0.81
CAPNS1-213ENST00000592354 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
CAPNS1-213ENST00000592354 C1orf167Q5SNV9 1468 aa20.13■□□□□ 0.81
CAPNS1-213ENST00000592354 ADGRF5Q8IZF2 1346 aa20.13■□□□□ 0.81
CAPNS1-213ENST00000592354 RGL3Q3MIN7 710 aa20.13■□□□□ 0.81
CAPNS1-213ENST00000592354 LAMC1P11047 1609 aa20.13■□□□□ 0.81
CAPNS1-213ENST00000592354 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
CAPNS1-213ENST00000592354 CDC42BPGQ6DT37 1551 aa20.12■□□□□ 0.81
CAPNS1-213ENST00000592354 NUTM2BA6NNL0 878 aaPredicted RBP20.11■□□□□ 0.81
CAPNS1-213ENST00000592354 NUTM2EB1AL46 878 aaPredicted RBP20.11■□□□□ 0.81
CAPNS1-213ENST00000592354 NUTM2AQ8IVF1 878 aaPredicted RBP20.11■□□□□ 0.81
CAPNS1-213ENST00000592354 PIK3C2GO75747 1445 aa20.09■□□□□ 0.81
CAPNS1-213ENST00000592354 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.8
CAPNS1-213ENST00000592354 PNPLA6Q8IY17 1366 aa20.07■□□□□ 0.8
CAPNS1-213ENST00000592354 RAB3GAP2Q9H2M9 1393 aa20.07■□□□□ 0.8
CAPNS1-213ENST00000592354 ORAI2Q96SN7 254 aa20.05■□□□□ 0.8
CAPNS1-213ENST00000592354 STK26Q9P289 416 aa20.05■□□□□ 0.8
CAPNS1-213ENST00000592354 TECPR2O15040 1411 aa20.04■□□□□ 0.8
CAPNS1-213ENST00000592354 LRRC59Q96AG4 307 aaKnown RBP20.04■□□□□ 0.8
CAPNS1-213ENST00000592354 FMN2Q9NZ56 1722 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms