RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 NEURL4Q96JN8 1562 aa14.33□□□□□ -0.12
TPM4-215ENST00000592138 SCAF11Q99590 1463 aaKnown RBP14.32□□□□□ -0.12
TPM4-215ENST00000592138 ANKRD30BQ9BXX2 1392 aa14.32□□□□□ -0.12
TPM4-215ENST00000592138 ZFYVE9O95405 1425 aa14.32□□□□□ -0.12
TPM4-215ENST00000592138 HDGFP51858 240 aaKnown RBP14.3□□□□□ -0.12
TPM4-215ENST00000592138 EID1Q9Y6B2 187 aa14.3□□□□□ -0.12
TPM4-215ENST00000592138 POLR1AO95602 1720 aaPredicted RBP14.29□□□□□ -0.12
TPM4-215ENST00000592138 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.29□□□□□ -0.12
TPM4-215ENST00000592138 NCKAP5LQ9HCH0 1330 aa14.29□□□□□ -0.12
TPM4-215ENST00000592138 NPHP4O75161 1426 aaPredicted RBP14.28□□□□□ -0.12
TPM4-215ENST00000592138 LTKP29376 864 aa14.28□□□□□ -0.12
TPM4-215ENST00000592138 RIMS2Q9UQ26 1411 aa14.28□□□□□ -0.12
TPM4-215ENST00000592138 SPATA31E1Q6ZUB1 1445 aa14.27□□□□□ -0.12
TPM4-215ENST00000592138 CHGAP10645 457 aaKnown RBP14.27□□□□□ -0.13
TPM4-215ENST00000592138 TXNDC2Q86VQ3 553 aa14.27□□□□□ -0.13
TPM4-215ENST00000592138 DHX57Q6P158 1386 aaKnown RBP14.26□□□□□ -0.13
TPM4-215ENST00000592138 RPGRIP1LQ68CZ1 1315 aa14.26□□□□□ -0.13
TPM4-215ENST00000592138 KIF1BO60333 1816 aa14.26□□□□□ -0.13
TPM4-215ENST00000592138 PLEKHG1Q9ULL1 1385 aa14.25□□□□□ -0.13
TPM4-215ENST00000592138 PCGF6Q9BYE7 350 aa14.25□□□□□ -0.13
TPM4-215ENST00000592138 IQGAP1P46940 1657 aa14.25□□□□□ -0.13
TPM4-215ENST00000592138 NEXMIFQ5QGS0 1516 aa14.25□□□□□ -0.13
TPM4-215ENST00000592138 MYO5BQ9ULV0 1848 aa14.23□□□□□ -0.13
TPM4-215ENST00000592138 ZNF326Q5BKZ1 582 aaKnown RBP14.23□□□□□ -0.13
TPM4-215ENST00000592138 PPP1R15AO75807 674 aaPredicted RBP14.21□□□□□ -0.13
TPM4-215ENST00000592138 MED1Q15648 1581 aaPredicted RBP14.21□□□□□ -0.14
TPM4-215ENST00000592138 VGFO15240 615 aaPredicted RBP14.2□□□□□ -0.14
TPM4-215ENST00000592138 DIP2AQ14689 1571 aa14.2□□□□□ -0.14
TPM4-215ENST00000592138 SETBP1Q9Y6X0 1596 aa14.2□□□□□ -0.14
TPM4-215ENST00000592138 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
TPM4-215ENST00000592138 MYOM2P54296 1465 aa14.18□□□□□ -0.14
TPM4-215ENST00000592138 ADAMTS13Q76LX8 1427 aa14.17□□□□□ -0.14
TPM4-215ENST00000592138 PPLO60437 1756 aa14.17□□□□□ -0.14
TPM4-215ENST00000592138 TBX22Q9Y458 520 aa14.17□□□□□ -0.14
TPM4-215ENST00000592138 PIK3R4Q99570 1358 aa14.17□□□□□ -0.14
TPM4-215ENST00000592138 IFT172Q9UG01 1749 aa14.16□□□□□ -0.14
TPM4-215ENST00000592138 RGL3Q3MIN7 710 aa14.16□□□□□ -0.14
TPM4-215ENST00000592138 NRXN1Q9ULB1 1477 aa14.15□□□□□ -0.14
TPM4-215ENST00000592138 NRXN3Q9Y4C0 1643 aa14.15□□□□□ -0.14
TPM4-215ENST00000592138 CPS1P31327 1500 aa14.15□□□□□ -0.14
TPM4-215ENST00000592138 ZNF335Q9H4Z2 1342 aaPredicted RBP14.15□□□□□ -0.15
TPM4-215ENST00000592138 CLSPNQ9HAW4 1339 aa14.15□□□□□ -0.15
TPM4-215ENST00000592138 ADRA2BP18089 450 aa14.14□□□□□ -0.15
TPM4-215ENST00000592138 NUTM2DQ5VT03 806 aaPredicted RBP14.14□□□□□ -0.15
TPM4-215ENST00000592138 PIK3C2GO75747 1445 aa14.14□□□□□ -0.15
TPM4-215ENST00000592138 NWD1Q149M9 1564 aa14.13□□□□□ -0.15
TPM4-215ENST00000592138 BCANQ96GW7 911 aa14.12□□□□□ -0.15
TPM4-215ENST00000592138 SLC26A8Q96RN1 970 aa14.12□□□□□ -0.15
TPM4-215ENST00000592138 UBAP1LF5GYI3 381 aa14.11□□□□□ -0.15
TPM4-215ENST00000592138 KCNA6P17658 529 aa14.11□□□□□ -0.15
TPM4-215ENST00000592138 NKTRP30414 1462 aaKnown RBP14.11□□□□□ -0.15
TPM4-215ENST00000592138 ADGRF5Q8IZF2 1346 aa14.11□□□□□ -0.15
TPM4-215ENST00000592138 PRAG1Q86YV5 1406 aa14.09□□□□□ -0.15
TPM4-215ENST00000592138 ALKQ9UM73 1620 aa14.09□□□□□ -0.15
TPM4-215ENST00000592138 SETD1AO15047 1707 aaKnown RBP14.08□□□□□ -0.16
TPM4-215ENST00000592138 DCAF11Q8TEB1 546 aa14.08□□□□□ -0.16
TPM4-215ENST00000592138 SIN3AQ96ST3 1273 aa14.08□□□□□ -0.16
TPM4-215ENST00000592138 METP08581 1390 aa14.08□□□□□ -0.16
TPM4-215ENST00000592138 LAMC1P11047 1609 aa14.08□□□□□ -0.16
TPM4-215ENST00000592138 C14orf93Q9H972 538 aaKnown RBP14.06□□□□□ -0.16
TPM4-215ENST00000592138 CHD2O14647 1828 aaKnown RBP14.06□□□□□ -0.16
TPM4-215ENST00000592138 PTPRUQ92729 1446 aa14.06□□□□□ -0.16
TPM4-215ENST00000592138 NCOA3Q9Y6Q9 1424 aa14.06□□□□□ -0.16
TPM4-215ENST00000592138 LRRC7Q96NW7 1537 aa14.05□□□□□ -0.16
TPM4-215ENST00000592138 XRN1Q8IZH2 1706 aaKnown RBP14.05□□□□□ -0.16
TPM4-215ENST00000592138 STRCP1A6NGW2 1772 aa14.05□□□□□ -0.16
TPM4-215ENST00000592138 HSPA1LP34931 641 aa14.04□□□□□ -0.16
TPM4-215ENST00000592138 NEUROD1Q13562 356 aa14.04□□□□□ -0.16
TPM4-215ENST00000592138 L3MBTL2Q969R5 705 aa14.04□□□□□ -0.16
TPM4-215ENST00000592138 PTCH1Q13635 1447 aa14.04□□□□□ -0.16
TPM4-215ENST00000592138 AMOTL2Q9Y2J4 779 aa14.03□□□□□ -0.16
TPM4-215ENST00000592138 TONSLQ96HA7 1378 aa14.03□□□□□ -0.16
TPM4-215ENST00000592138 TECPR2O15040 1411 aa14.03□□□□□ -0.16
TPM4-215ENST00000592138 ASXL1Q8IXJ9 1541 aa14.02□□□□□ -0.16
TPM4-215ENST00000592138 TIMELESSQ9UNS1 1208 aa14.02□□□□□ -0.17
TPM4-215ENST00000592138 KDM2AQ9Y2K7 1162 aa14.02□□□□□ -0.17
TPM4-215ENST00000592138 LRPPRCP42704 1394 aaKnown RBP14.01□□□□□ -0.17
TPM4-215ENST00000592138 ADGRB1O14514 1584 aa14□□□□□ -0.17
TPM4-215ENST00000592138 TMEM94Q12767 1356 aa14□□□□□ -0.17
TPM4-215ENST00000592138 ABCC11Q96J66 1382 aa14□□□□□ -0.17
TPM4-215ENST00000592138 CFAP70Q5T0N1 1121 aa14□□□□□ -0.17
TPM4-215ENST00000592138 CCER1Q8TC90 406 aaPredicted RBP14□□□□□ -0.17
TPM4-215ENST00000592138 KIAA1210Q9ULL0 1709 aa14□□□□□ -0.17
TPM4-215ENST00000592138 YTHDC2Q9H6S0 1430 aaKnown RBP13.99□□□□□ -0.17
TPM4-215ENST00000592138 PROSER2Q86WR7 435 aaPredicted RBP13.99□□□□□ -0.17
TPM4-215ENST00000592138 SIRT1Q96EB6 747 aa13.99□□□□□ -0.17
TPM4-215ENST00000592138 KNDC1Q76NI1 1749 aa13.98□□□□□ -0.17
TPM4-215ENST00000592138 FAM135BQ49AJ0 1406 aa13.98□□□□□ -0.17
TPM4-215ENST00000592138 DLC1Q96QB1 1528 aa13.97□□□□□ -0.17
TPM4-215ENST00000592138 ROBO2Q9HCK4 1378 aa13.96□□□□□ -0.17
TPM4-215ENST00000592138 DCCP43146 1447 aa13.96□□□□□ -0.18
TPM4-215ENST00000592138 TMEM132EQ6IEE7 984 aa13.95□□□□□ -0.18
TPM4-215ENST00000592138 MSH6P52701 1360 aa13.95□□□□□ -0.18
TPM4-215ENST00000592138 XIRP1Q702N8 1843 aaKnown RBP13.94□□□□□ -0.18
TPM4-215ENST00000592138 ADGRL3Q9HAR2 1447 aa13.94□□□□□ -0.18
TPM4-215ENST00000592138 TOM1O60784 492 aa13.93□□□□□ -0.18
TPM4-215ENST00000592138 C19orf44Q9H6X5 657 aa13.93□□□□□ -0.18
TPM4-215ENST00000592138 GPRASP1Q5JY77 1395 aa13.93□□□□□ -0.18
TPM4-215ENST00000592138 TRPM1Q7Z4N2 1603 aa13.93□□□□□ -0.18
TPM4-215ENST00000592138 PIP4K2BP78356 416 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms