RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 STRCP1A6NGW2 1772 aa15.58■□□□□ 0.08
VMP1-214ENST00000592106 LTKP29376 864 aa15.58■□□□□ 0.08
VMP1-214ENST00000592106 SLC52A1Q9NWF4 448 aa15.58■□□□□ 0.08
VMP1-214ENST00000592106 IDI1Q13907 227 aa15.57■□□□□ 0.08
VMP1-214ENST00000592106 UNC13BO14795 1591 aa15.57■□□□□ 0.08
VMP1-214ENST00000592106 HSPA1LP34931 641 aa15.56■□□□□ 0.08
VMP1-214ENST00000592106 ROCK1Q13464 1354 aa15.56■□□□□ 0.08
VMP1-214ENST00000592106 GCC2Q8IWJ2 1684 aa15.56■□□□□ 0.08
VMP1-214ENST00000592106 MED1Q15648 1581 aaPredicted RBP15.53■□□□□ 0.08
VMP1-214ENST00000592106 HDGFP51858 240 aaKnown RBP15.52■□□□□ 0.08
VMP1-214ENST00000592106 ALKQ9UM73 1620 aa15.52■□□□□ 0.08
VMP1-214ENST00000592106 BCANQ96GW7 911 aa15.51■□□□□ 0.07
VMP1-214ENST00000592106 NKTRP30414 1462 aaKnown RBP15.5■□□□□ 0.07
VMP1-214ENST00000592106 IQGAP3Q86VI3 1631 aa15.5■□□□□ 0.07
VMP1-214ENST00000592106 PPP1R15AO75807 674 aaPredicted RBP15.49■□□□□ 0.07
VMP1-214ENST00000592106 KCNA6P17658 529 aa15.49■□□□□ 0.07
VMP1-214ENST00000592106 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
VMP1-214ENST00000592106 SLC4A2P04920 1241 aa15.47■□□□□ 0.07
VMP1-214ENST00000592106 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.47■□□□□ 0.07
VMP1-214ENST00000592106 SLC26A8Q96RN1 970 aa15.47■□□□□ 0.07
VMP1-214ENST00000592106 RIMS2Q9UQ26 1411 aa15.47■□□□□ 0.07
VMP1-214ENST00000592106 E9PCH4 1651 aa15.47■□□□□ 0.07
VMP1-214ENST00000592106 PLEKHG1Q9ULL1 1385 aa15.47■□□□□ 0.07
VMP1-214ENST00000592106 TMEM131LA2VDJ0 1609 aa15.46■□□□□ 0.07
VMP1-214ENST00000592106 ZFYVE9O95405 1425 aa15.46■□□□□ 0.07
VMP1-214ENST00000592106 XIRP1Q702N8 1843 aaKnown RBP15.46■□□□□ 0.07
VMP1-214ENST00000592106 ITGAEP38570 1179 aa15.46■□□□□ 0.07
VMP1-214ENST00000592106 TMEM94Q12767 1356 aa15.46■□□□□ 0.07
VMP1-214ENST00000592106 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
VMP1-214ENST00000592106 NUP155O75694 1391 aa15.45■□□□□ 0.06
VMP1-214ENST00000592106 MYO5BQ9ULV0 1848 aa15.45■□□□□ 0.06
VMP1-214ENST00000592106 PROSER2Q86WR7 435 aaPredicted RBP15.44■□□□□ 0.06
VMP1-214ENST00000592106 DIP2AQ14689 1571 aa15.43■□□□□ 0.06
VMP1-214ENST00000592106 MSH6P52701 1360 aa15.42■□□□□ 0.06
VMP1-214ENST00000592106 FAM135BQ49AJ0 1406 aa15.42■□□□□ 0.06
VMP1-214ENST00000592106 PPARGC1BQ86YN6 1023 aaKnown RBP15.39■□□□□ 0.05
VMP1-214ENST00000592106 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
VMP1-214ENST00000592106 CHD2O14647 1828 aaKnown RBP15.38■□□□□ 0.05
VMP1-214ENST00000592106 SPHKAPQ2M3C7 1700 aa15.38■□□□□ 0.05
VMP1-214ENST00000592106 RRBP1Q9P2E9 1410 aaKnown RBP15.38■□□□□ 0.05
VMP1-214ENST00000592106 TBX22Q9Y458 520 aa15.38■□□□□ 0.05
VMP1-214ENST00000592106 ROBO1Q9Y6N7 1651 aa15.38■□□□□ 0.05
VMP1-214ENST00000592106 PIK3R4Q99570 1358 aa15.37■□□□□ 0.05
VMP1-214ENST00000592106 NCOA3Q9Y6Q9 1424 aa15.37■□□□□ 0.05
VMP1-214ENST00000592106 TRPM2O94759 1503 aa15.37■□□□□ 0.05
VMP1-214ENST00000592106 ADAMTS13Q76LX8 1427 aa15.34■□□□□ 0.05
VMP1-214ENST00000592106 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
VMP1-214ENST00000592106 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
VMP1-214ENST00000592106 NUTM2DQ5VT03 806 aaPredicted RBP15.33■□□□□ 0.04
VMP1-214ENST00000592106 RBM33Q96EV2 1170 aaKnown RBP15.33■□□□□ 0.04
VMP1-214ENST00000592106 ZNF326Q5BKZ1 582 aaKnown RBP15.31■□□□□ 0.04
VMP1-214ENST00000592106 NAIPQ13075 1403 aa15.31■□□□□ 0.04
VMP1-214ENST00000592106 PHLPP1O60346 1717 aa15.3■□□□□ 0.04
VMP1-214ENST00000592106 SLAIN2Q9P270 581 aa15.3■□□□□ 0.04
VMP1-214ENST00000592106 SETBP1Q9Y6X0 1596 aa15.3■□□□□ 0.04
VMP1-214ENST00000592106 CADPS2Q86UW7 1296 aa15.29■□□□□ 0.04
VMP1-214ENST00000592106 HFM1A2PYH4 1435 aa15.28■□□□□ 0.04
VMP1-214ENST00000592106 ATF3P18847 181 aa15.28■□□□□ 0.04
VMP1-214ENST00000592106 CLTCL1P53675 1640 aa15.28■□□□□ 0.04
VMP1-214ENST00000592106 JCADQ9P266 1359 aa15.27■□□□□ 0.04
VMP1-214ENST00000592106 KIF1BO60333 1816 aa15.27■□□□□ 0.04
VMP1-214ENST00000592106 C19orf44Q9H6X5 657 aa15.27■□□□□ 0.04
VMP1-214ENST00000592106 AMOTL2Q9Y2J4 779 aa15.27■□□□□ 0.04
VMP1-214ENST00000592106 DCCP43146 1447 aa15.26■□□□□ 0.03
VMP1-214ENST00000592106 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.26■□□□□ 0.03
VMP1-214ENST00000592106 NRXN3Q9Y4C0 1643 aa15.26■□□□□ 0.03
VMP1-214ENST00000592106 TRIM52Q96A61 297 aa15.26■□□□□ 0.03
VMP1-214ENST00000592106 XRN1Q8IZH2 1706 aaKnown RBP15.26■□□□□ 0.03
VMP1-214ENST00000592106 NEXMIFQ5QGS0 1516 aa15.25■□□□□ 0.03
VMP1-214ENST00000592106 PTPRUQ92729 1446 aa15.25■□□□□ 0.03
VMP1-214ENST00000592106 ZBTB22O15209 634 aa15.24■□□□□ 0.03
VMP1-214ENST00000592106 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
VMP1-214ENST00000592106 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
VMP1-214ENST00000592106 C1QBPQ07021 282 aaKnown RBP15.23■□□□□ 0.03
VMP1-214ENST00000592106 COL16A1Q07092 1604 aaPredicted RBP15.23■□□□□ 0.03
VMP1-214ENST00000592106 AHDC1Q5TGY3 1603 aaPredicted RBP15.23■□□□□ 0.03
VMP1-214ENST00000592106 SPATA31A6Q5VVP1 1343 aa15.19■□□□□ 0.02
VMP1-214ENST00000592106 RPGRIP1LQ68CZ1 1315 aa15.19■□□□□ 0.02
VMP1-214ENST00000592106 VGFO15240 615 aaPredicted RBP15.19■□□□□ 0.02
VMP1-214ENST00000592106 ADGRL3Q9HAR2 1447 aa15.18■□□□□ 0.02
VMP1-214ENST00000592106 RGS17Q9UGC6 210 aaPredicted RBP15.18■□□□□ 0.02
VMP1-214ENST00000592106 METP08581 1390 aa15.18■□□□□ 0.02
VMP1-214ENST00000592106 SHPRHQ149N8 1683 aa15.17■□□□□ 0.02
VMP1-214ENST00000592106 MEX3CQ5U5Q3 659 aaKnown RBP15.17■□□□□ 0.02
VMP1-214ENST00000592106 ASXL1Q8IXJ9 1541 aa15.17■□□□□ 0.02
VMP1-214ENST00000592106 PTCH1Q13635 1447 aa15.17■□□□□ 0.02
VMP1-214ENST00000592106 BRINP3Q76B58 766 aa15.16■□□□□ 0.02
VMP1-214ENST00000592106 MST1RQ04912 1400 aa15.16■□□□□ 0.02
VMP1-214ENST00000592106 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
VMP1-214ENST00000592106 CCDC144AA2RUR9 1427 aa15.15■□□□□ 0.02
VMP1-214ENST00000592106 NALCNQ8IZF0 1738 aa15.14■□□□□ 0.01
VMP1-214ENST00000592106 PPLO60437 1756 aa15.13■□□□□ 0.01
VMP1-214ENST00000592106 POTEAQ6S8J7 498 aa15.13■□□□□ 0.01
VMP1-214ENST00000592106 PRAG1Q86YV5 1406 aa15.13■□□□□ 0.01
VMP1-214ENST00000592106 NHSL1Q5SYE7 1610 aa15.13■□□□□ 0.01
VMP1-214ENST00000592106 SETD1AO15047 1707 aaKnown RBP15.12■□□□□ 0.01
VMP1-214ENST00000592106 LRP6O75581 1613 aa15.12■□□□□ 0.01
VMP1-214ENST00000592106 SETD5Q9C0A6 1442 aa15.11■□□□□ 0.01
VMP1-214ENST00000592106 ZNF772Q68DY9 489 aaPredicted RBP15.11■□□□□ 0.01
VMP1-214ENST00000592106 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms