RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 GLI2P10070 1586 aa21.46■■□□□ 1.03
MBD1-227ENST00000592060 NRXN1Q9ULB1 1477 aa21.45■■□□□ 1.02
MBD1-227ENST00000592060 PNISRQ8TF01 805 aaKnown RBP21.45■■□□□ 1.02
MBD1-227ENST00000592060 LRPPRCP42704 1394 aaKnown RBP21.44■■□□□ 1.02
MBD1-227ENST00000592060 CAMSAP1Q5T5Y3 1602 aa21.44■■□□□ 1.02
MBD1-227ENST00000592060 NPATQ14207 1427 aa21.44■■□□□ 1.02
MBD1-227ENST00000592060 WASHC2CQ9Y4E1 1318 aa21.41■■□□□ 1.02
MBD1-227ENST00000592060 SYNMO15061 1565 aa21.41■■□□□ 1.02
MBD1-227ENST00000592060 PPLO60437 1756 aa21.41■■□□□ 1.02
MBD1-227ENST00000592060 TMC1Q8TDI8 760 aa21.41■■□□□ 1.02
MBD1-227ENST00000592060 MYOM1P52179 1685 aa21.41■■□□□ 1.02
MBD1-227ENST00000592060 SIGLEC1Q9BZZ2 1709 aa21.4■■□□□ 1.02
MBD1-227ENST00000592060 ZC3H13Q5T200 1668 aaKnown RBP21.38■■□□□ 1.01
MBD1-227ENST00000592060 MYO3AQ8NEV4 1616 aa21.38■■□□□ 1.01
MBD1-227ENST00000592060 CFAP65Q6ZU64 1925 aaKnown RBP21.38■■□□□ 1.01
MBD1-227ENST00000592060 RAPGEF3O95398 923 aa21.37■■□□□ 1.01
MBD1-227ENST00000592060 SMG6Q86US8 1419 aaKnown RBP21.37■■□□□ 1.01
MBD1-227ENST00000592060 EIF3AQ14152 1382 aaKnown RBP21.37■■□□□ 1.01
MBD1-227ENST00000592060 PIK3C2BO00750 1634 aa21.37■■□□□ 1.01
MBD1-227ENST00000592060 ADGRF5Q8IZF2 1346 aa21.36■■□□□ 1.01
MBD1-227ENST00000592060 PANK3Q9H999 370 aa21.36■■□□□ 1.01
MBD1-227ENST00000592060 SETBP1Q9Y6X0 1596 aa21.36■■□□□ 1.01
MBD1-227ENST00000592060 KDM5AP29375 1690 aaKnown RBP21.36■■□□□ 1.01
MBD1-227ENST00000592060 NLRP13Q86W25 1043 aa21.36■■□□□ 1.01
MBD1-227ENST00000592060 NOS1P29475 1434 aa21.34■■□□□ 1.01
MBD1-227ENST00000592060 GGT6Q6P531 493 aa21.34■■□□□ 1.01
MBD1-227ENST00000592060 DIP2BQ9P265 1576 aa21.34■■□□□ 1.01
MBD1-227ENST00000592060 ZMYM4Q5VZL5 1548 aa21.33■■□□□ 1
MBD1-227ENST00000592060 CFAP70Q5T0N1 1121 aa21.32■■□□□ 1
MBD1-227ENST00000592060 YEATS2Q9ULM3 1422 aa21.31■■□□□ 1
MBD1-227ENST00000592060 AEBP2Q6ZN18 517 aaPredicted RBP21.3■■□□□ 1
MBD1-227ENST00000592060 PIK3C2GO75747 1445 aa21.3■■□□□ 1
MBD1-227ENST00000592060 CDCA8Q53HL2 280 aa21.3■■□□□ 1
MBD1-227ENST00000592060 ERICH6BQ5W0A0 696 aa21.3■■□□□ 1
MBD1-227ENST00000592060 ARHGAP31Q2M1Z3 1444 aa21.3■■□□□ 1
MBD1-227ENST00000592060 TSHZ2Q9NRE2 1034 aa21.29■■□□□ 1
MBD1-227ENST00000592060 ERVK-7P63135 1459 aa21.29■■□□□ 1
MBD1-227ENST00000592060 CC2D1BQ5T0F9 858 aaKnown RBP21.28■■□□□ 1
MBD1-227ENST00000592060 IRX6P78412 446 aaPredicted RBP21.27■■□□□ 1
MBD1-227ENST00000592060 NUDCQ9Y266 331 aa21.27■■□□□ 1
MBD1-227ENST00000592060 ADGRB1O14514 1584 aa21.27■■□□□ 1
MBD1-227ENST00000592060 INSRP06213 1382 aa21.26■□□□□ 0.99
MBD1-227ENST00000592060 SBNO2Q9Y2G9 1366 aa21.26■□□□□ 0.99
MBD1-227ENST00000592060 ASXL1Q8IXJ9 1541 aa21.25■□□□□ 0.99
MBD1-227ENST00000592060 NEXMIFQ5QGS0 1516 aa21.24■□□□□ 0.99
MBD1-227ENST00000592060 RPGRIP1LQ68CZ1 1315 aa21.24■□□□□ 0.99
MBD1-227ENST00000592060 PREX1Q8TCU6 1659 aa21.23■□□□□ 0.99
MBD1-227ENST00000592060 BLMP54132 1417 aaPredicted RBP21.23■□□□□ 0.99
MBD1-227ENST00000592060 QRICH2Q9H0J4 1663 aa21.22■□□□□ 0.99
MBD1-227ENST00000592060 CHGAP10645 457 aaKnown RBP21.22■□□□□ 0.99
MBD1-227ENST00000592060 NPC1L1Q9UHC9 1359 aa21.22■□□□□ 0.99
MBD1-227ENST00000592060 SLC24A1O60721 1099 aa21.21■□□□□ 0.99
MBD1-227ENST00000592060 AMER1Q5JTC6 1135 aaPredicted RBP21.21■□□□□ 0.99
MBD1-227ENST00000592060 TSPOAP1O95153 1857 aa21.2■□□□□ 0.98
MBD1-227ENST00000592060 REREQ9P2R6 1566 aa21.2■□□□□ 0.98
MBD1-227ENST00000592060 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
MBD1-227ENST00000592060 C14orf93Q9H972 538 aaKnown RBP21.2■□□□□ 0.98
MBD1-227ENST00000592060 KNSTRNQ9Y448 316 aa21.19■□□□□ 0.98
MBD1-227ENST00000592060 MYO5BQ9ULV0 1848 aa21.18■□□□□ 0.98
MBD1-227ENST00000592060 FAM69CQ0P6D2 419 aa21.17■□□□□ 0.98
MBD1-227ENST00000592060 PPP4R2Q9NY27 417 aa21.17■□□□□ 0.98
MBD1-227ENST00000592060 ARHGEF28Q8N1W1 1705 aaKnown RBP21.16■□□□□ 0.98
MBD1-227ENST00000592060 SENP3-EIF4A1A0A087X0R7 540 aa21.16■□□□□ 0.98
MBD1-227ENST00000592060 TMEM131LA2VDJ0 1609 aa21.15■□□□□ 0.98
MBD1-227ENST00000592060 CENPJQ9HC77 1338 aaPredicted RBP21.15■□□□□ 0.98
MBD1-227ENST00000592060 AGLP35573 1532 aa21.14■□□□□ 0.97
MBD1-227ENST00000592060 PPP2R1AP30153 589 aa21.14■□□□□ 0.97
MBD1-227ENST00000592060 ZFYVE9O95405 1425 aa21.13■□□□□ 0.97
MBD1-227ENST00000592060 IDI1Q13907 227 aa21.1■□□□□ 0.97
MBD1-227ENST00000592060 SLC52A1Q9NWF4 448 aa21.1■□□□□ 0.97
MBD1-227ENST00000592060 PDE3BQ13370 1112 aa21.09■□□□□ 0.97
MBD1-227ENST00000592060 TRAK1Q9UPV9 953 aa21.09■□□□□ 0.97
MBD1-227ENST00000592060 KIF13AQ9H1H9 1805 aa21.09■□□□□ 0.97
MBD1-227ENST00000592060 VGFO15240 615 aaPredicted RBP21.08■□□□□ 0.96
MBD1-227ENST00000592060 TMEM132EQ6IEE7 984 aa21.06■□□□□ 0.96
MBD1-227ENST00000592060 CARD14Q9BXL6 1004 aa21.06■□□□□ 0.96
MBD1-227ENST00000592060 USP32Q8NFA0 1604 aa21.06■□□□□ 0.96
MBD1-227ENST00000592060 CLTCQ00610 1675 aaKnown RBP21.06■□□□□ 0.96
MBD1-227ENST00000592060 TULP4Q9NRJ4 1543 aa21.05■□□□□ 0.96
MBD1-227ENST00000592060 ARHGEF40Q8TER5 1519 aa21.04■□□□□ 0.96
MBD1-227ENST00000592060 ADAMTS8Q9UP79 889 aa21.03■□□□□ 0.96
MBD1-227ENST00000592060 NUTM2DQ5VT03 806 aaPredicted RBP21.02■□□□□ 0.96
MBD1-227ENST00000592060 SALL2Q9Y467 1007 aaPredicted RBP21.01■□□□□ 0.95
MBD1-227ENST00000592060 SPATA31D1Q6ZQQ2 1576 aa21.01■□□□□ 0.95
MBD1-227ENST00000592060 B4GALNT3Q6L9W6 998 aa21■□□□□ 0.95
MBD1-227ENST00000592060 PPP6R1Q9UPN7 881 aa21■□□□□ 0.95
MBD1-227ENST00000592060 NSD3Q9BZ95 1437 aa21■□□□□ 0.95
MBD1-227ENST00000592060 WDR43Q15061 677 aaKnown RBP eCLIP20.98■□□□□ 0.95
MBD1-227ENST00000592060 FBXO31Q5XUX0 539 aaPredicted RBP20.98■□□□□ 0.95
MBD1-227ENST00000592060 PUS7Q96PZ0 661 aaKnown RBP20.98■□□□□ 0.95
MBD1-227ENST00000592060 CDCA7LQ96GN5 454 aa20.97■□□□□ 0.95
MBD1-227ENST00000592060 PTPRMP28827 1452 aa20.97■□□□□ 0.95
MBD1-227ENST00000592060 RRP1P56182 461 aaKnown RBP20.96■□□□□ 0.95
MBD1-227ENST00000592060 RCAN3Q9UKA8 241 aa20.96■□□□□ 0.95
MBD1-227ENST00000592060 PLEKHH1Q9ULM0 1364 aa20.95■□□□□ 0.94
MBD1-227ENST00000592060 ALKQ9UM73 1620 aa20.94■□□□□ 0.94
MBD1-227ENST00000592060 SHPRHQ149N8 1683 aa20.94■□□□□ 0.94
MBD1-227ENST00000592060 SLC12A5Q9H2X9 1139 aa20.94■□□□□ 0.94
MBD1-227ENST00000592060 EVC2Q86UK5 1308 aa20.94■□□□□ 0.94
MBD1-227ENST00000592060 RBM19Q9Y4C8 960 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms