RNA–Protein interactions for RNA: ENST00000592054.5

DNMT1-226, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-226ENST00000592054 CERKQ8TCT0 537 aa7.1□□□□□ -1.27
DNMT1-226ENST00000592054 HMGXB3Q12766 1538 aa7.1□□□□□ -1.27
DNMT1-226ENST00000592054 GRXCR2A6NFK2 248 aa7.09□□□□□ -1.27
DNMT1-226ENST00000592054 APLP1P51693 650 aa7.09□□□□□ -1.27
DNMT1-226ENST00000592054 COPS2P61201 443 aa7.09□□□□□ -1.27
DNMT1-226ENST00000592054 NUDT18Q6ZVK8 323 aa7.09□□□□□ -1.27
DNMT1-226ENST00000592054 NKX2-3Q8TAU0 364 aa7.09□□□□□ -1.27
DNMT1-226ENST00000592054 TSHZ2Q9NRE2 1034 aa7.09□□□□□ -1.27
DNMT1-226ENST00000592054 SPDYE16A6NNV3 312 aaPredicted RBP7.08□□□□□ -1.28
DNMT1-226ENST00000592054 C3orf80F5H4A9 247 aa7.08□□□□□ -1.28
DNMT1-226ENST00000592054 ARAP1Q96P48 1450 aa7.08□□□□□ -1.28
DNMT1-226ENST00000592054 LMTK3Q96Q04 1460 aa7.07□□□□□ -1.28
DNMT1-226ENST00000592054 ZNF775Q96BV0 537 aaPredicted RBP7.07□□□□□ -1.28
DNMT1-226ENST00000592054 ATAD2BQ9ULI0 1458 aa7.06□□□□□ -1.28
DNMT1-226ENST00000592054 NECTIN2Q92692 538 aa7.06□□□□□ -1.28
DNMT1-226ENST00000592054 SLC4A3P48751 1232 aa7.04□□□□□ -1.28
DNMT1-226ENST00000592054 PRIM1P49642 420 aaKnown RBP7.04□□□□□ -1.28
DNMT1-226ENST00000592054 SLF2Q8IX21 1173 aa7.04□□□□□ -1.28
DNMT1-226ENST00000592054 CDHR5Q9HBB8 845 aa7.04□□□□□ -1.28
DNMT1-226ENST00000592054 ZCCHC6Q5VYS8 1495 aaKnown RBP7.04□□□□□ -1.28
DNMT1-226ENST00000592054 SWT1Q5T5J6 900 aaKnown RBP7.03□□□□□ -1.28
DNMT1-226ENST00000592054 SOCS7O14512 581 aa7.02□□□□□ -1.29
DNMT1-226ENST00000592054 PLCB2Q00722 1185 aa7.02□□□□□ -1.29
DNMT1-226ENST00000592054 PKDCCQ504Y2 493 aa7.02□□□□□ -1.29
DNMT1-226ENST00000592054 TMUB1Q9BVT8 246 aa7.02□□□□□ -1.29
DNMT1-226ENST00000592054 ERCC6L2Q5T890 1561 aa7.01□□□□□ -1.29
DNMT1-226ENST00000592054 BAZ1BQ9UIG0 1483 aaKnown RBP7.01□□□□□ -1.29
DNMT1-226ENST00000592054 ZPR1O75312 459 aa7.01□□□□□ -1.29
DNMT1-226ENST00000592054 E2F4Q16254 413 aa7.01□□□□□ -1.29
DNMT1-226ENST00000592054 FBXO41Q8TF61 875 aa7.01□□□□□ -1.29
DNMT1-226ENST00000592054 SLC19A1P41440 591 aa7□□□□□ -1.29
DNMT1-226ENST00000592054 RBM27Q9P2N5 1060 aaKnown RBP7□□□□□ -1.29
DNMT1-226ENST00000592054 OSBPP22059 807 aa6.99□□□□□ -1.29
DNMT1-226ENST00000592054 PADI6Q6TGC4 694 aa6.99□□□□□ -1.29
DNMT1-226ENST00000592054 PCDHB3Q9Y5E6 796 aa6.99□□□□□ -1.29
DNMT1-226ENST00000592054 PRR14Q9BWN1 585 aa6.98□□□□□ -1.29
DNMT1-226ENST00000592054 WDR70Q9NW82 654 aa6.98□□□□□ -1.29
DNMT1-226ENST00000592054 CEP164Q9UPV0 1460 aa6.98□□□□□ -1.29
DNMT1-226ENST00000592054 RNF223E7ERA6 249 aa6.97□□□□□ -1.29
DNMT1-226ENST00000592054 CHD1O14646 1710 aa6.97□□□□□ -1.29
DNMT1-226ENST00000592054 TRIM67Q6ZTA4 783 aa6.97□□□□□ -1.29
DNMT1-226ENST00000592054 RSF1Q96T23 1441 aaPredicted RBP6.97□□□□□ -1.29
DNMT1-226ENST00000592054 DGAT1O75907 488 aa6.96□□□□□ -1.3
DNMT1-226ENST00000592054 MYT1Q01538 1121 aa6.96□□□□□ -1.3
DNMT1-226ENST00000592054 BLOC1S3Q6QNY0 202 aa6.96□□□□□ -1.3
DNMT1-226ENST00000592054 FAM187AA6NFU0 413 aa6.95□□□□□ -1.3
DNMT1-226ENST00000592054 SPRYD7Q5W111 196 aa6.95□□□□□ -1.3
DNMT1-226ENST00000592054 ZNF598Q86UK7 904 aaKnown RBP6.95□□□□□ -1.3
DNMT1-226ENST00000592054 POTECB2RU33 542 aa6.94□□□□□ -1.3
DNMT1-226ENST00000592054 PPEF1O14829 653 aaPredicted RBP6.94□□□□□ -1.3
DNMT1-226ENST00000592054 TLL1O43897 1013 aa6.94□□□□□ -1.3
DNMT1-226ENST00000592054 HAP1P54257 671 aaPredicted RBP6.94□□□□□ -1.3
DNMT1-226ENST00000592054 SMARCA4P51532 1647 aa6.94□□□□□ -1.3
DNMT1-226ENST00000592054 CADPSQ9ULU8 1353 aa6.94□□□□□ -1.3
DNMT1-226ENST00000592054 TNFRSF10AO00220 468 aa6.93□□□□□ -1.3
DNMT1-226ENST00000592054 ZNF697Q5TEC3 545 aa6.93□□□□□ -1.3
DNMT1-226ENST00000592054 TTC13Q8NBP0 860 aa6.93□□□□□ -1.3
DNMT1-226ENST00000592054 HECW2Q9P2P5 1572 aa6.92□□□□□ -1.3
DNMT1-226ENST00000592054 S1PR4O95977 384 aa6.92□□□□□ -1.3
DNMT1-226ENST00000592054 ANKLE1Q8NAG6 615 aa6.92□□□□□ -1.3
DNMT1-226ENST00000592054 EMID1Q96A84 441 aaPredicted RBP6.92□□□□□ -1.3
DNMT1-226ENST00000592054 EYA1Q99502 592 aa6.92□□□□□ -1.3
DNMT1-226ENST00000592054 NPDC1Q9NQX5 325 aaPredicted RBP6.92□□□□□ -1.3
DNMT1-226ENST00000592054 ARIH1Q9Y4X5 557 aaPredicted RBP6.92□□□□□ -1.3
DNMT1-226ENST00000592054 PRR20EP86478 221 aa6.91□□□□□ -1.3
DNMT1-226ENST00000592054 PRR20CP86479 221 aa6.91□□□□□ -1.3
DNMT1-226ENST00000592054 PRR20DP86480 221 aa6.91□□□□□ -1.3
DNMT1-226ENST00000592054 PRR20BP86481 221 aa6.91□□□□□ -1.3
DNMT1-226ENST00000592054 PRR20AP86496 221 aa6.91□□□□□ -1.3
DNMT1-226ENST00000592054 KMT5BQ4FZB7 885 aa6.9□□□□□ -1.3
DNMT1-226ENST00000592054 LIAT1Q6ZQX7 453 aa6.9□□□□□ -1.3
DNMT1-226ENST00000592054 KDM2AQ9Y2K7 1162 aa6.9□□□□□ -1.3
DNMT1-226ENST00000592054 ILDR2Q71H61 639 aa6.89□□□□□ -1.31
DNMT1-226ENST00000592054 DISP3Q9P2K9 1392 aa6.89□□□□□ -1.31
DNMT1-226ENST00000592054 FANCD2Q9BXW9 1451 aa6.89□□□□□ -1.31
DNMT1-226ENST00000592054 ST8SIA5O15466 376 aa6.88□□□□□ -1.31
DNMT1-226ENST00000592054 DNAJB2P25686 324 aa6.88□□□□□ -1.31
DNMT1-226ENST00000592054 ZNF608Q9ULD9 1512 aaPredicted RBP6.87□□□□□ -1.31
DNMT1-226ENST00000592054 ACTN4O43707 911 aaKnown RBP6.87□□□□□ -1.31
DNMT1-226ENST00000592054 GDF9O60383 454 aa6.87□□□□□ -1.31
DNMT1-226ENST00000592054 RBM46Q8TBY0 533 aaKnown RBP6.87□□□□□ -1.31
DNMT1-226ENST00000592054 KCNV2Q8TDN2 545 aa6.87□□□□□ -1.31
DNMT1-226ENST00000592054 KIF13AQ9H1H9 1805 aa6.86□□□□□ -1.31
DNMT1-226ENST00000592054 CFHP08603 1231 aa6.86□□□□□ -1.31
DNMT1-226ENST00000592054 TREML4Q6UXN2 200 aa6.86□□□□□ -1.31
DNMT1-226ENST00000592054 AAASQ9NRG9 546 aa6.86□□□□□ -1.31
DNMT1-226ENST00000592054 EIF4G3O43432 1585 aaKnown RBP6.86□□□□□ -1.31
DNMT1-226ENST00000592054 ADH1BP00325 375 aa6.85□□□□□ -1.31
DNMT1-226ENST00000592054 FOXC1Q12948 553 aa6.85□□□□□ -1.31
DNMT1-226ENST00000592054 SLC6A16Q9GZN6 736 aa6.85□□□□□ -1.31
DNMT1-226ENST00000592054 URB2Q14146 1524 aaKnown RBP6.85□□□□□ -1.31
DNMT1-226ENST00000592054 IFT140Q96RY7 1462 aa6.85□□□□□ -1.31
DNMT1-226ENST00000592054 PEG3Q9GZU2 1588 aa6.84□□□□□ -1.31
DNMT1-226ENST00000592054 NR1I2O75469 434 aa6.84□□□□□ -1.31
DNMT1-226ENST00000592054 TMEM134Q9H6X4 195 aa6.84□□□□□ -1.31
DNMT1-226ENST00000592054 RCCD1A6NED2 376 aa6.83□□□□□ -1.32
DNMT1-226ENST00000592054 PLA2G2CQ5R387 149 aa6.83□□□□□ -1.32
DNMT1-226ENST00000592054 FAM161AQ3B820 660 aa6.82□□□□□ -1.32
DNMT1-226ENST00000592054 KDM6BO15054 1643 aa6.82□□□□□ -1.32
DNMT1-226ENST00000592054 SYNJ2O15056 1496 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms