RNA–Protein interactions for RNA: ENST00000592054.5

DNMT1-226, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-226ENST00000592054 AEBP2Q6ZN18 517 aaPredicted RBP18.7■□□□□ 0.58
DNMT1-226ENST00000592054 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
DNMT1-226ENST00000592054 SENP3Q9H4L4 574 aaPredicted RBP16.03■□□□□ 0.16
DNMT1-226ENST00000592054 PHF23Q9BUL5 403 aaPredicted RBP15.79■□□□□ 0.12
DNMT1-226ENST00000592054 FOXD1Q16676 465 aa14.95□□□□□ -0.02
DNMT1-226ENST00000592054 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
DNMT1-226ENST00000592054 MSH5O43196 834 aa14.11□□□□□ -0.15
DNMT1-226ENST00000592054 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-226ENST00000592054 PLPPR3Q6T4P5 718 aa13.94□□□□□ -0.18
DNMT1-226ENST00000592054 PPP6R1Q9UPN7 881 aa13.79□□□□□ -0.2
DNMT1-226ENST00000592054 ADRA2BP18089 450 aa13.77□□□□□ -0.21
DNMT1-226ENST00000592054 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-226ENST00000592054 DMRT2Q9Y5R5 561 aa12.65□□□□□ -0.38
DNMT1-226ENST00000592054 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
DNMT1-226ENST00000592054 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
DNMT1-226ENST00000592054 DCAF8L1A6NGE4 600 aa12.28□□□□□ -0.44
DNMT1-226ENST00000592054 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
DNMT1-226ENST00000592054 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
DNMT1-226ENST00000592054 CNKSR2Q8WXI2 1034 aa12.01□□□□□ -0.49
DNMT1-226ENST00000592054 RNF39Q9H2S5 420 aa11.98□□□□□ -0.49
DNMT1-226ENST00000592054 RNF216Q9NWF9 866 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-226ENST00000592054 C1QBPQ07021 282 aaKnown RBP11.81□□□□□ -0.52
DNMT1-226ENST00000592054 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
DNMT1-226ENST00000592054 DNAJC5BQ9UF47 199 aa11.66□□□□□ -0.54
DNMT1-226ENST00000592054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.553e-7■■■□□ 16.3
DNMT1-226ENST00000592054 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
DNMT1-226ENST00000592054 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-226ENST00000592054 CAPN15O75808 1086 aa11.24□□□□□ -0.61
DNMT1-226ENST00000592054 SPINK5Q9NQ38 1064 aaPredicted RBP11.2□□□□□ -0.62
DNMT1-226ENST00000592054 DSG3P32926 999 aa11.16□□□□□ -0.62
DNMT1-226ENST00000592054 POTEHQ6S545 545 aa11.07□□□□□ -0.64
DNMT1-226ENST00000592054 KCNA4P22459 653 aa11.05□□□□□ -0.64
DNMT1-226ENST00000592054 TRHP20396 242 aaPredicted RBP11.02□□□□□ -0.65
DNMT1-226ENST00000592054 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
DNMT1-226ENST00000592054 APLP2Q06481 763 aa10.97□□□□□ -0.65
DNMT1-226ENST00000592054 ABCB7O75027 752 aa10.96□□□□□ -0.65
DNMT1-226ENST00000592054 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
DNMT1-226ENST00000592054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.9□□□□□ -0.66
DNMT1-226ENST00000592054 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.66
DNMT1-226ENST00000592054 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
DNMT1-226ENST00000592054 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
DNMT1-226ENST00000592054 MYCNP04198 464 aaPredicted RBP10.63□□□□□ -0.71
DNMT1-226ENST00000592054 POLA2Q14181 598 aa10.63□□□□□ -0.71
DNMT1-226ENST00000592054 CHRDL2Q6WN34 429 aa10.54□□□□□ -0.72
DNMT1-226ENST00000592054 SLC4A1APQ9BWU0 796 aaKnown RBP10.41□□□□□ -0.74
DNMT1-226ENST00000592054 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
DNMT1-226ENST00000592054 ATF5Q9Y2D1 282 aaPredicted RBP10.39□□□□□ -0.75
DNMT1-226ENST00000592054 ZBTB12Q9Y330 459 aaPredicted RBP10.38□□□□□ -0.75
DNMT1-226ENST00000592054 AKT1S1Q96B36 256 aa10.37□□□□□ -0.75
DNMT1-226ENST00000592054 OSCARQ8IYS5 282 aa10.29□□□□□ -0.76
DNMT1-226ENST00000592054 REM2Q8IYK8 340 aaPredicted RBP10.28□□□□□ -0.76
DNMT1-226ENST00000592054 SP7Q8TDD2 431 aaPredicted RBP10.26□□□□□ -0.77
DNMT1-226ENST00000592054 PIP4P2Q8N4L2 257 aa10.23□□□□□ -0.77
DNMT1-226ENST00000592054 HAX1O00165 279 aa10.17□□□□□ -0.78
DNMT1-226ENST00000592054 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
DNMT1-226ENST00000592054 ZBTB22O15209 634 aa10.13□□□□□ -0.79
DNMT1-226ENST00000592054 FXR2P51116 673 aaKnown RBP eCLIP10.1□□□□□ -0.793e-6■■□□□ 12
DNMT1-226ENST00000592054 ATXN8OSP0DMR3 200 aa10.06□□□□□ -0.8
DNMT1-226ENST00000592054 FBLN2P98095 1184 aa10.05□□□□□ -0.8
DNMT1-226ENST00000592054 SPDYE2BA6NHP3 402 aa10.02□□□□□ -0.81
DNMT1-226ENST00000592054 SPDYE6P0CI01 402 aa10.02□□□□□ -0.81
DNMT1-226ENST00000592054 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
DNMT1-226ENST00000592054 CLEC11AQ9Y240 323 aa9.99□□□□□ -0.81
DNMT1-226ENST00000592054 EVX2Q03828 476 aa9.95□□□□□ -0.82
DNMT1-226ENST00000592054 PRKAR2AP13861 404 aaKnown RBP9.94□□□□□ -0.82
DNMT1-226ENST00000592054 SPDYE1Q8NFV5 336 aaPredicted RBP9.93□□□□□ -0.82
DNMT1-226ENST00000592054 ZNF692Q9BU19 519 aaPredicted RBP9.91□□□□□ -0.82
DNMT1-226ENST00000592054 MKRN4PQ13434 485 aaPredicted RBP9.88□□□□□ -0.83
DNMT1-226ENST00000592054 SSUH2Q9Y2M2 353 aa9.83□□□□□ -0.84
DNMT1-226ENST00000592054 C19orf67A6NJJ6 358 aa9.79□□□□□ -0.84
DNMT1-226ENST00000592054 CHADLQ6NUI6 762 aa9.78□□□□□ -0.84
DNMT1-226ENST00000592054 PRR29P0C7W0 189 aa9.76□□□□□ -0.85
DNMT1-226ENST00000592054 PABPN1Q86U42 306 aaKnown RBP eCLIP9.75□□□□□ -0.85
DNMT1-226ENST00000592054 GABBR2O75899 941 aa9.74□□□□□ -0.85
DNMT1-226ENST00000592054 LHX8Q68G74 356 aa9.64□□□□□ -0.87
DNMT1-226ENST00000592054 CD44P16070 742 aaKnown RBP9.61□□□□□ -0.87
DNMT1-226ENST00000592054 FARP1Q9Y4F1 1045 aaPredicted RBP9.59□□□□□ -0.87
DNMT1-226ENST00000592054 EHMT2Q96KQ7 1210 aa9.57□□□□□ -0.88
DNMT1-226ENST00000592054 CSRNP3Q8WYN3 585 aa9.5□□□□□ -0.89
DNMT1-226ENST00000592054 POTEIP0CG38 1075 aa9.49□□□□□ -0.89
DNMT1-226ENST00000592054 DCBLD2Q96PD2 775 aa9.48□□□□□ -0.89
DNMT1-226ENST00000592054 CLCN6P51797 869 aa9.47□□□□□ -0.89
DNMT1-226ENST00000592054 ZRANB1Q9UGI0 708 aa9.45□□□□□ -0.9
DNMT1-226ENST00000592054 STAG3Q9UJ98 1225 aa9.42□□□□□ -0.9
DNMT1-226ENST00000592054 CREBZFQ9NS37 354 aa9.4□□□□□ -0.9
DNMT1-226ENST00000592054 ZNF579Q8NAF0 562 aaKnown RBP9.39□□□□□ -0.91
DNMT1-226ENST00000592054 SPDYE4A6NLX3 237 aa9.35□□□□□ -0.91
DNMT1-226ENST00000592054 PAK3O75914 559 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-226ENST00000592054 GALR2O43603 387 aaPredicted RBP9.33□□□□□ -0.92
DNMT1-226ENST00000592054 PLSCR2Q9NRY7 297 aa9.29□□□□□ -0.92
DNMT1-226ENST00000592054 PHF12Q96QT6 1004 aa9.28□□□□□ -0.92
DNMT1-226ENST00000592054 NPM1P06748 294 aaKnown RBP eCLIP9.27□□□□□ -0.93
DNMT1-226ENST00000592054 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
DNMT1-226ENST00000592054 POTEB2H3BUK9 544 aa9.18□□□□□ -0.94
DNMT1-226ENST00000592054 MNX1P50219 401 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-226ENST00000592054 PELP1Q8IZL8 1130 aaKnown RBP9.15□□□□□ -0.94
DNMT1-226ENST00000592054 MS4A3Q96HJ5 214 aa9.14□□□□□ -0.95
DNMT1-226ENST00000592054 TSPYL2Q9H2G4 693 aaPredicted RBP9.12□□□□□ -0.95
DNMT1-226ENST00000592054 METRNQ9UJH8 293 aa9.11□□□□□ -0.95
DNMT1-226ENST00000592054 POTEMA6NI47 508 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms