RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 ERCC6Q03468 1493 aa9.2□□□□□ -0.94
NPC1-213ENST00000591955 ZPR1O75312 459 aa9.19□□□□□ -0.94
NPC1-213ENST00000591955 OSBPP22059 807 aa9.19□□□□□ -0.94
NPC1-213ENST00000591955 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
NPC1-213ENST00000591955 SLF2Q8IX21 1173 aa9.19□□□□□ -0.94
NPC1-213ENST00000591955 TRIM26Q12899 539 aaPredicted RBP9.18□□□□□ -0.94
NPC1-213ENST00000591955 EMID1Q96A84 441 aaPredicted RBP9.18□□□□□ -0.94
NPC1-213ENST00000591955 SLC19A1P41440 591 aa9.16□□□□□ -0.94
NPC1-213ENST00000591955 E2F4Q16254 413 aa9.16□□□□□ -0.94
NPC1-213ENST00000591955 RNF223E7ERA6 249 aa9.15□□□□□ -0.94
NPC1-213ENST00000591955 DGAT1O75907 488 aa9.14□□□□□ -0.95
NPC1-213ENST00000591955 PRR20EP86478 221 aa9.14□□□□□ -0.95
NPC1-213ENST00000591955 PRR20CP86479 221 aa9.14□□□□□ -0.95
NPC1-213ENST00000591955 PRR20DP86480 221 aa9.14□□□□□ -0.95
NPC1-213ENST00000591955 PRR20BP86481 221 aa9.14□□□□□ -0.95
NPC1-213ENST00000591955 PRR20AP86496 221 aa9.14□□□□□ -0.95
NPC1-213ENST00000591955 PADI6Q6TGC4 694 aa9.14□□□□□ -0.95
NPC1-213ENST00000591955 NPDC1Q9NQX5 325 aaPredicted RBP9.14□□□□□ -0.95
NPC1-213ENST00000591955 CENPBP07199 599 aaPredicted RBP9.13□□□□□ -0.95
NPC1-213ENST00000591955 PKDCCQ504Y2 493 aa9.13□□□□□ -0.95
NPC1-213ENST00000591955 SPRYD7Q5W111 196 aa9.13□□□□□ -0.95
NPC1-213ENST00000591955 PRR14Q9BWN1 585 aa9.13□□□□□ -0.95
NPC1-213ENST00000591955 POTECB2RU33 542 aa9.12□□□□□ -0.95
NPC1-213ENST00000591955 EYA1Q99502 592 aa9.12□□□□□ -0.95
NPC1-213ENST00000591955 PCDHB3Q9Y5E6 796 aa9.12□□□□□ -0.95
NPC1-213ENST00000591955 ZNF598Q86UK7 904 aaKnown RBP9.11□□□□□ -0.95
NPC1-213ENST00000591955 NESP48681 1621 aa9.11□□□□□ -0.95
NPC1-213ENST00000591955 THOC2Q8NI27 1593 aaKnown RBP9.11□□□□□ -0.95
NPC1-213ENST00000591955 SLC4A3P48751 1232 aa9.1□□□□□ -0.95
NPC1-213ENST00000591955 BLOC1S3Q6QNY0 202 aa9.1□□□□□ -0.95
NPC1-213ENST00000591955 ANKLE1Q8NAG6 615 aa9.09□□□□□ -0.95
NPC1-213ENST00000591955 BBXQ8WY36 941 aaPredicted RBP9.09□□□□□ -0.95
NPC1-213ENST00000591955 TLL1O43897 1013 aa9.07□□□□□ -0.96
NPC1-213ENST00000591955 LIAT1Q6ZQX7 453 aa9.07□□□□□ -0.96
NPC1-213ENST00000591955 GDF9O60383 454 aa9.06□□□□□ -0.96
NPC1-213ENST00000591955 LCE2AQ5TA79 106 aaPredicted RBP9.06□□□□□ -0.96
NPC1-213ENST00000591955 PPARGC1BQ86YN6 1023 aaKnown RBP9.06□□□□□ -0.96
NPC1-213ENST00000591955 ZNF697Q5TEC3 545 aa9.05□□□□□ -0.96
NPC1-213ENST00000591955 ACIN1Q9UKV3 1341 aaKnown RBP9.05□□□□□ -0.96
NPC1-213ENST00000591955 SMARCA2P51531 1590 aa9.04□□□□□ -0.96
NPC1-213ENST00000591955 PPEF1O14829 653 aaPredicted RBP9.04□□□□□ -0.96
NPC1-213ENST00000591955 S1PR4O95977 384 aa9.04□□□□□ -0.96
NPC1-213ENST00000591955 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
NPC1-213ENST00000591955 TREML4Q6UXN2 200 aa9.03□□□□□ -0.96
NPC1-213ENST00000591955 CLSPNQ9HAW4 1339 aa9.03□□□□□ -0.96
NPC1-213ENST00000591955 KIF21AQ7Z4S6 1674 aa9.02□□□□□ -0.97
NPC1-213ENST00000591955 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
NPC1-213ENST00000591955 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
NPC1-213ENST00000591955 DNAJB2P25686 324 aa9.01□□□□□ -0.97
NPC1-213ENST00000591955 WDR70Q9NW82 654 aa9.01□□□□□ -0.97
NPC1-213ENST00000591955 SPRYD3Q8NCJ5 442 aa9□□□□□ -0.97
NPC1-213ENST00000591955 TMEM134Q9H6X4 195 aa9□□□□□ -0.97
NPC1-213ENST00000591955 AAASQ9NRG9 546 aa9□□□□□ -0.97
NPC1-213ENST00000591955 ST8SIA5O15466 376 aa8.99□□□□□ -0.97
NPC1-213ENST00000591955 ADH1BP00325 375 aa8.99□□□□□ -0.97
NPC1-213ENST00000591955 KMT5BQ4FZB7 885 aa8.99□□□□□ -0.97
NPC1-213ENST00000591955 NCAPD3P42695 1498 aa8.98□□□□□ -0.97
NPC1-213ENST00000591955 PLA2G2CQ5R387 149 aa8.98□□□□□ -0.97
NPC1-213ENST00000591955 SUPT5HO00267 1087 aaKnown RBP8.96□□□□□ -0.98
NPC1-213ENST00000591955 CFHP08603 1231 aa8.96□□□□□ -0.98
NPC1-213ENST00000591955 ATAD2BQ9ULI0 1458 aa8.96□□□□□ -0.98
NPC1-213ENST00000591955 LMOD2Q6P5Q4 547 aa8.95□□□□□ -0.98
NPC1-213ENST00000591955 CRIPAKQ8N1N5 446 aa8.95□□□□□ -0.98
NPC1-213ENST00000591955 RBM46Q8TBY0 533 aaKnown RBP8.95□□□□□ -0.98
NPC1-213ENST00000591955 PKD2L1Q9P0L9 805 aa8.95□□□□□ -0.98
NPC1-213ENST00000591955 ADGRG1Q9Y653 693 aa8.95□□□□□ -0.98
NPC1-213ENST00000591955 HMGXB3Q12766 1538 aa8.95□□□□□ -0.98
NPC1-213ENST00000591955 NR1I2O75469 434 aa8.94□□□□□ -0.98
NPC1-213ENST00000591955 PTGDRQ13258 359 aa8.94□□□□□ -0.98
NPC1-213ENST00000591955 SLC6A16Q9GZN6 736 aa8.94□□□□□ -0.98
NPC1-213ENST00000591955 SLC10A3P09131 477 aa8.93□□□□□ -0.98
NPC1-213ENST00000591955 SMARCA4P51532 1647 aa8.92□□□□□ -0.98
NPC1-213ENST00000591955 BAZ1AQ9NRL2 1556 aaPredicted RBP8.92□□□□□ -0.98
NPC1-213ENST00000591955 RCCD1A6NED2 376 aa8.92□□□□□ -0.98
NPC1-213ENST00000591955 AVPP01185 164 aa8.9□□□□□ -0.98
NPC1-213ENST00000591955 MLLT3P42568 568 aaPredicted RBP8.9□□□□□ -0.98
NPC1-213ENST00000591955 FOXC1Q12948 553 aa8.9□□□□□ -0.98
NPC1-213ENST00000591955 DACH1Q9UI36 760 aa8.9□□□□□ -0.98
NPC1-213ENST00000591955 SCUBE3Q8IX30 993 aa8.89□□□□□ -0.99
NPC1-213ENST00000591955 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.89□□□□□ -0.99
NPC1-213ENST00000591955 LAMC3Q9Y6N6 1575 aa8.88□□□□□ -0.99
NPC1-213ENST00000591955 WFS1O76024 890 aa8.88□□□□□ -0.99
NPC1-213ENST00000591955 RPIAP49247 311 aa8.88□□□□□ -0.99
NPC1-213ENST00000591955 FAM161AQ3B820 660 aa8.88□□□□□ -0.99
NPC1-213ENST00000591955 TOR4AQ9NXH8 423 aa8.88□□□□□ -0.99
NPC1-213ENST00000591955 BAZ1BQ9UIG0 1483 aaKnown RBP8.86□□□□□ -0.99
NPC1-213ENST00000591955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.86□□□□□ -0.99
NPC1-213ENST00000591955 SPSB2Q99619 263 aa8.86□□□□□ -0.99
NPC1-213ENST00000591955 GMPR2Q9P2T1 348 aaKnown RBP8.86□□□□□ -0.99
NPC1-213ENST00000591955 STK17AQ9UEE5 414 aa8.85□□□□□ -0.99
NPC1-213ENST00000591955 AXIN1O15169 862 aa8.84□□□□□ -0.99
NPC1-213ENST00000591955 WIPF1O43516 503 aa8.84□□□□□ -0.99
NPC1-213ENST00000591955 SMCPP49901 116 aaPredicted RBP8.84□□□□□ -0.99
NPC1-213ENST00000591955 NFX1Q12986 1120 aaKnown RBP8.84□□□□□ -0.99
NPC1-213ENST00000591955 CTC1Q2NKJ3 1217 aa8.84□□□□□ -0.99
NPC1-213ENST00000591955 PUS10Q3MIT2 529 aaKnown RBP8.84□□□□□ -0.99
NPC1-213ENST00000591955 ARHGEF1Q92888 912 aaKnown RBP8.84□□□□□ -0.99
NPC1-213ENST00000591955 GTF3C3Q9Y5Q9 886 aa8.84□□□□□ -0.99
NPC1-213ENST00000591955 C11orf95C9JLR9 678 aaPredicted RBP8.83□□□□□ -1
NPC1-213ENST00000591955 PAXIP1Q6ZW49 1069 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms