RNA–Protein interactions for RNA: ENST00000591631.2

AP3D1-210, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-210ENST00000591631 KCNA6P17658 529 aa24.57■■□□□ 1.52
AP3D1-210ENST00000591631 HDGFP51858 240 aaKnown RBP24.57■■□□□ 1.52
AP3D1-210ENST00000591631 ITGAEP38570 1179 aa24.56■■□□□ 1.52
AP3D1-210ENST00000591631 PPP1R15AO75807 674 aaPredicted RBP24.55■■□□□ 1.52
AP3D1-210ENST00000591631 SENP3Q9H4L4 574 aaPredicted RBP24.55■■□□□ 1.52
AP3D1-210ENST00000591631 NWD1Q149M9 1564 aa24.54■■□□□ 1.52
AP3D1-210ENST00000591631 ZFYVE9O95405 1425 aa24.54■■□□□ 1.52
AP3D1-210ENST00000591631 NKTRP30414 1462 aaKnown RBP24.54■■□□□ 1.52
AP3D1-210ENST00000591631 TMEM94Q12767 1356 aa24.54■■□□□ 1.52
AP3D1-210ENST00000591631 RIMS2Q9UQ26 1411 aa24.53■■□□□ 1.52
AP3D1-210ENST00000591631 PLEKHG1Q9ULL1 1385 aa24.53■■□□□ 1.52
AP3D1-210ENST00000591631 PPARGC1BQ86YN6 1023 aaKnown RBP24.52■■□□□ 1.52
AP3D1-210ENST00000591631 NUP155O75694 1391 aa24.52■■□□□ 1.52
AP3D1-210ENST00000591631 CHD2O14647 1828 aaKnown RBP24.51■■□□□ 1.51
AP3D1-210ENST00000591631 CHGAP10645 457 aaKnown RBP24.51■■□□□ 1.51
AP3D1-210ENST00000591631 PROSER2Q86WR7 435 aaPredicted RBP24.51■■□□□ 1.51
AP3D1-210ENST00000591631 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.49■■□□□ 1.51
AP3D1-210ENST00000591631 PHF23Q9BUL5 403 aaPredicted RBP24.49■■□□□ 1.51
AP3D1-210ENST00000591631 SPHKAPQ2M3C7 1700 aa24.46■■□□□ 1.51
AP3D1-210ENST00000591631 FAM135BQ49AJ0 1406 aa24.45■■□□□ 1.51
AP3D1-210ENST00000591631 MSH6P52701 1360 aa24.44■■□□□ 1.5
AP3D1-210ENST00000591631 ROBO1Q9Y6N7 1651 aa24.44■■□□□ 1.5
AP3D1-210ENST00000591631 DIP2AQ14689 1571 aa24.44■■□□□ 1.5
AP3D1-210ENST00000591631 RBM33Q96EV2 1170 aaKnown RBP24.42■■□□□ 1.5
AP3D1-210ENST00000591631 TBX22Q9Y458 520 aa24.41■■□□□ 1.5
AP3D1-210ENST00000591631 RRBP1Q9P2E9 1410 aaKnown RBP24.38■■□□□ 1.49
AP3D1-210ENST00000591631 NUTM2DQ5VT03 806 aaPredicted RBP24.38■■□□□ 1.49
AP3D1-210ENST00000591631 TRPM2O94759 1503 aa24.36■■□□□ 1.49
AP3D1-210ENST00000591631 PIK3R4Q99570 1358 aa24.36■■□□□ 1.49
AP3D1-210ENST00000591631 ADAMTS13Q76LX8 1427 aa24.35■■□□□ 1.49
AP3D1-210ENST00000591631 NCOA3Q9Y6Q9 1424 aa24.35■■□□□ 1.49
AP3D1-210ENST00000591631 C14orf37Q86TY3 774 aa24.33■■□□□ 1.49
AP3D1-210ENST00000591631 PHLPP1O60346 1717 aa24.32■■□□□ 1.48
AP3D1-210ENST00000591631 SLAIN2Q9P270 581 aa24.32■■□□□ 1.48
AP3D1-210ENST00000591631 KIF1BO60333 1816 aa24.31■■□□□ 1.48
AP3D1-210ENST00000591631 ZNF326Q5BKZ1 582 aaKnown RBP24.3■■□□□ 1.48
AP3D1-210ENST00000591631 NAIPQ13075 1403 aa24.29■■□□□ 1.48
AP3D1-210ENST00000591631 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.29■■□□□ 1.48
AP3D1-210ENST00000591631 SETBP1Q9Y6X0 1596 aa24.28■■□□□ 1.48
AP3D1-210ENST00000591631 CLTCL1P53675 1640 aa24.28■■□□□ 1.48
AP3D1-210ENST00000591631 NRXN3Q9Y4C0 1643 aa24.27■■□□□ 1.48
AP3D1-210ENST00000591631 CADPS2Q86UW7 1296 aa24.25■■□□□ 1.47
AP3D1-210ENST00000591631 C19orf44Q9H6X5 657 aa24.24■■□□□ 1.47
AP3D1-210ENST00000591631 AMOTL2Q9Y2J4 779 aa24.24■■□□□ 1.47
AP3D1-210ENST00000591631 ATF3P18847 181 aa24.23■■□□□ 1.47
AP3D1-210ENST00000591631 XRN1Q8IZH2 1706 aaKnown RBP24.23■■□□□ 1.47
AP3D1-210ENST00000591631 HFM1A2PYH4 1435 aa24.22■■□□□ 1.47
AP3D1-210ENST00000591631 NEXMIFQ5QGS0 1516 aa24.21■■□□□ 1.47
AP3D1-210ENST00000591631 PTPRUQ92729 1446 aa24.21■■□□□ 1.47
AP3D1-210ENST00000591631 TRIM52Q96A61 297 aa24.21■■□□□ 1.47
AP3D1-210ENST00000591631 COL16A1Q07092 1604 aaPredicted RBP24.2■■□□□ 1.46
AP3D1-210ENST00000591631 JCADQ9P266 1359 aa24.19■■□□□ 1.46
AP3D1-210ENST00000591631 RGS17Q9UGC6 210 aaPredicted RBP24.17■■□□□ 1.46
AP3D1-210ENST00000591631 DCCP43146 1447 aa24.17■■□□□ 1.46
AP3D1-210ENST00000591631 AHDC1Q5TGY3 1603 aaPredicted RBP24.16■■□□□ 1.46
AP3D1-210ENST00000591631 SLC4A1APQ9BWU0 796 aaKnown RBP24.14■■□□□ 1.45
AP3D1-210ENST00000591631 METP08581 1390 aa24.13■■□□□ 1.45
AP3D1-210ENST00000591631 SHPRHQ149N8 1683 aa24.11■■□□□ 1.45
AP3D1-210ENST00000591631 PPLO60437 1756 aa24.09■■□□□ 1.45
AP3D1-210ENST00000591631 VGFO15240 615 aaPredicted RBP24.09■■□□□ 1.45
AP3D1-210ENST00000591631 SPATA31A6Q5VVP1 1343 aa24.09■■□□□ 1.45
AP3D1-210ENST00000591631 NALCNQ8IZF0 1738 aa24.08■■□□□ 1.45
AP3D1-210ENST00000591631 BRINP3Q76B58 766 aa24.07■■□□□ 1.44
AP3D1-210ENST00000591631 ADGRL3Q9HAR2 1447 aa24.07■■□□□ 1.44
AP3D1-210ENST00000591631 RPGRIP1LQ68CZ1 1315 aa24.07■■□□□ 1.44
AP3D1-210ENST00000591631 SETD1AO15047 1707 aaKnown RBP24.07■■□□□ 1.44
AP3D1-210ENST00000591631 ASXL1Q8IXJ9 1541 aa24.06■■□□□ 1.44
AP3D1-210ENST00000591631 MST1RQ04912 1400 aa24.05■■□□□ 1.44
AP3D1-210ENST00000591631 POTEAQ6S8J7 498 aa24.05■■□□□ 1.44
AP3D1-210ENST00000591631 NHSL1Q5SYE7 1610 aa24.05■■□□□ 1.44
AP3D1-210ENST00000591631 MEX3CQ5U5Q3 659 aaKnown RBP24.04■■□□□ 1.44
AP3D1-210ENST00000591631 PTCH1Q13635 1447 aa24.02■■□□□ 1.44
AP3D1-210ENST00000591631 LRP6O75581 1613 aa24.01■■□□□ 1.43
AP3D1-210ENST00000591631 CCDC144AA2RUR9 1427 aa24■■□□□ 1.43
AP3D1-210ENST00000591631 FOXD1Q16676 465 aa23.97■■□□□ 1.43
AP3D1-210ENST00000591631 SETD5Q9C0A6 1442 aa23.96■■□□□ 1.43
AP3D1-210ENST00000591631 PRAG1Q86YV5 1406 aa23.95■■□□□ 1.42
AP3D1-210ENST00000591631 ZNF772Q68DY9 489 aaPredicted RBP23.95■■□□□ 1.42
AP3D1-210ENST00000591631 ROBO2Q9HCK4 1378 aa23.94■■□□□ 1.42
AP3D1-210ENST00000591631 IFT172Q9UG01 1749 aa23.94■■□□□ 1.42
AP3D1-210ENST00000591631 LRRC59Q96AG4 307 aaKnown RBP23.94■■□□□ 1.42
AP3D1-210ENST00000591631 ACIN1Q9UKV3 1341 aaKnown RBP23.93■■□□□ 1.42
AP3D1-210ENST00000591631 NUTM2BA6NNL0 878 aaPredicted RBP23.92■■□□□ 1.42
AP3D1-210ENST00000591631 NUTM2EB1AL46 878 aaPredicted RBP23.92■■□□□ 1.42
AP3D1-210ENST00000591631 NUTM2AQ8IVF1 878 aaPredicted RBP23.92■■□□□ 1.42
AP3D1-210ENST00000591631 MPHOSPH9Q99550 1183 aa23.92■■□□□ 1.42
AP3D1-210ENST00000591631 C1orf167Q5SNV9 1468 aa23.92■■□□□ 1.42
AP3D1-210ENST00000591631 LAMC1P11047 1609 aa23.89■■□□□ 1.42
AP3D1-210ENST00000591631 ANKRD30BQ9BXX2 1392 aa23.89■■□□□ 1.41
AP3D1-210ENST00000591631 SPATA31E1Q6ZUB1 1445 aa23.88■■□□□ 1.41
AP3D1-210ENST00000591631 RGL3Q3MIN7 710 aa23.88■■□□□ 1.41
AP3D1-210ENST00000591631 DDX17Q92841 729 aaKnown RBP23.86■■□□□ 1.41
AP3D1-210ENST00000591631 CDC42BPGQ6DT37 1551 aa23.86■■□□□ 1.41
AP3D1-210ENST00000591631 ADGRF5Q8IZF2 1346 aa23.85■■□□□ 1.41
AP3D1-210ENST00000591631 PNPLA6Q8IY17 1366 aa23.85■■□□□ 1.41
AP3D1-210ENST00000591631 KNDC1Q76NI1 1749 aa23.84■■□□□ 1.41
AP3D1-210ENST00000591631 ORAI2Q96SN7 254 aa23.82■■□□□ 1.4
AP3D1-210ENST00000591631 AFF2P51816 1311 aa23.81■■□□□ 1.4
AP3D1-210ENST00000591631 TECPR2O15040 1411 aa23.8■■□□□ 1.4
AP3D1-210ENST00000591631 PIK3C2GO75747 1445 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms