RNA–Protein interactions for RNA: ENST00000591600.1

APOC4-201, Transcript of apolipoprotein C4, humanhuman

TSL 3 BASIC

Gene APOC4, Length 348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-201ENST00000591600 ZFYVE9O95405 1425 aa23.65■■□□□ 1.38
APOC4-201ENST00000591600 SLC26A8Q96RN1 970 aa23.64■■□□□ 1.37
APOC4-201ENST00000591600 NKTRP30414 1462 aaKnown RBP23.63■■□□□ 1.37
APOC4-201ENST00000591600 CHD2O14647 1828 aaKnown RBP23.63■■□□□ 1.37
APOC4-201ENST00000591600 TMEM94Q12767 1356 aa23.63■■□□□ 1.37
APOC4-201ENST00000591600 FAM135BQ49AJ0 1406 aa23.62■■□□□ 1.37
APOC4-201ENST00000591600 HDGFP51858 240 aaKnown RBP23.62■■□□□ 1.37
APOC4-201ENST00000591600 PLEKHG1Q9ULL1 1385 aa23.6■■□□□ 1.37
APOC4-201ENST00000591600 PROSER2Q86WR7 435 aaPredicted RBP23.58■■□□□ 1.37
APOC4-201ENST00000591600 RIMS2Q9UQ26 1411 aa23.58■■□□□ 1.36
APOC4-201ENST00000591600 BCANQ96GW7 911 aa23.55■■□□□ 1.36
APOC4-201ENST00000591600 ROBO1Q9Y6N7 1651 aa23.54■■□□□ 1.36
APOC4-201ENST00000591600 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.54■■□□□ 1.36
APOC4-201ENST00000591600 PHF23Q9BUL5 403 aaPredicted RBP23.54■■□□□ 1.36
APOC4-201ENST00000591600 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
APOC4-201ENST00000591600 TBX22Q9Y458 520 aa23.53■■□□□ 1.36
APOC4-201ENST00000591600 NUP155O75694 1391 aa23.52■■□□□ 1.36
APOC4-201ENST00000591600 PPP1R15AO75807 674 aaPredicted RBP23.52■■□□□ 1.36
APOC4-201ENST00000591600 DIP2AQ14689 1571 aa23.51■■□□□ 1.35
APOC4-201ENST00000591600 MSH6P52701 1360 aa23.5■■□□□ 1.35
APOC4-201ENST00000591600 RBM33Q96EV2 1170 aaKnown RBP23.49■■□□□ 1.35
APOC4-201ENST00000591600 NCOA3Q9Y6Q9 1424 aa23.49■■□□□ 1.35
APOC4-201ENST00000591600 ADAMTS13Q76LX8 1427 aa23.48■■□□□ 1.35
APOC4-201ENST00000591600 SPHKAPQ2M3C7 1700 aa23.47■■□□□ 1.35
APOC4-201ENST00000591600 CHGAP10645 457 aaKnown RBP23.47■■□□□ 1.35
APOC4-201ENST00000591600 ITGAEP38570 1179 aa23.47■■□□□ 1.35
APOC4-201ENST00000591600 PIK3R4Q99570 1358 aa23.47■■□□□ 1.35
APOC4-201ENST00000591600 SLAIN2Q9P270 581 aa23.45■■□□□ 1.34
APOC4-201ENST00000591600 PPARGC1BQ86YN6 1023 aaKnown RBP23.41■■□□□ 1.34
APOC4-201ENST00000591600 TRPM2O94759 1503 aa23.41■■□□□ 1.34
APOC4-201ENST00000591600 PHLPP1O60346 1717 aa23.41■■□□□ 1.34
APOC4-201ENST00000591600 RRBP1Q9P2E9 1410 aaKnown RBP23.41■■□□□ 1.34
APOC4-201ENST00000591600 RGS17Q9UGC6 210 aaPredicted RBP23.4■■□□□ 1.34
APOC4-201ENST00000591600 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.39■■□□□ 1.34
APOC4-201ENST00000591600 NUTM2DQ5VT03 806 aaPredicted RBP23.39■■□□□ 1.33
APOC4-201ENST00000591600 NRXN3Q9Y4C0 1643 aa23.37■■□□□ 1.33
APOC4-201ENST00000591600 SETBP1Q9Y6X0 1596 aa23.36■■□□□ 1.33
APOC4-201ENST00000591600 C19orf44Q9H6X5 657 aa23.36■■□□□ 1.33
APOC4-201ENST00000591600 CADPS2Q86UW7 1296 aa23.34■■□□□ 1.33
APOC4-201ENST00000591600 COL16A1Q07092 1604 aaPredicted RBP23.33■■□□□ 1.33
APOC4-201ENST00000591600 XRN1Q8IZH2 1706 aaKnown RBP23.33■■□□□ 1.33
APOC4-201ENST00000591600 KIF1BO60333 1816 aa23.33■■□□□ 1.33
APOC4-201ENST00000591600 AMOTL2Q9Y2J4 779 aa23.33■■□□□ 1.33
APOC4-201ENST00000591600 NAIPQ13075 1403 aa23.33■■□□□ 1.32
APOC4-201ENST00000591600 PTPRUQ92729 1446 aa23.33■■□□□ 1.32
APOC4-201ENST00000591600 CLTCL1P53675 1640 aa23.32■■□□□ 1.32
APOC4-201ENST00000591600 JCADQ9P266 1359 aa23.31■■□□□ 1.32
APOC4-201ENST00000591600 C14orf37Q86TY3 774 aa23.31■■□□□ 1.32
APOC4-201ENST00000591600 ATF3P18847 181 aa23.29■■□□□ 1.32
APOC4-201ENST00000591600 AHDC1Q5TGY3 1603 aaPredicted RBP23.29■■□□□ 1.32
APOC4-201ENST00000591600 DCCP43146 1447 aa23.28■■□□□ 1.32
APOC4-201ENST00000591600 NEXMIFQ5QGS0 1516 aa23.28■■□□□ 1.32
APOC4-201ENST00000591600 ZNF326Q5BKZ1 582 aaKnown RBP23.27■■□□□ 1.32
APOC4-201ENST00000591600 SHPRHQ149N8 1683 aa23.25■■□□□ 1.31
APOC4-201ENST00000591600 HFM1A2PYH4 1435 aa23.25■■□□□ 1.31
APOC4-201ENST00000591600 POTEAQ6S8J7 498 aa23.24■■□□□ 1.31
APOC4-201ENST00000591600 METP08581 1390 aa23.23■■□□□ 1.31
APOC4-201ENST00000591600 SPATA31A6Q5VVP1 1343 aa23.22■■□□□ 1.31
APOC4-201ENST00000591600 BRINP3Q76B58 766 aa23.19■■□□□ 1.3
APOC4-201ENST00000591600 SETD1AO15047 1707 aaKnown RBP23.19■■□□□ 1.3
APOC4-201ENST00000591600 NHSL1Q5SYE7 1610 aa23.17■■□□□ 1.3
APOC4-201ENST00000591600 MST1RQ04912 1400 aa23.16■■□□□ 1.3
APOC4-201ENST00000591600 LRP6O75581 1613 aa23.16■■□□□ 1.3
APOC4-201ENST00000591600 VGFO15240 615 aaPredicted RBP23.16■■□□□ 1.3
APOC4-201ENST00000591600 ASXL1Q8IXJ9 1541 aa23.16■■□□□ 1.3
APOC4-201ENST00000591600 NALCNQ8IZF0 1738 aa23.16■■□□□ 1.3
APOC4-201ENST00000591600 ADGRL3Q9HAR2 1447 aa23.16■■□□□ 1.3
APOC4-201ENST00000591600 PPLO60437 1756 aa23.15■■□□□ 1.3
APOC4-201ENST00000591600 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
APOC4-201ENST00000591600 RPGRIP1LQ68CZ1 1315 aa23.14■■□□□ 1.3
APOC4-201ENST00000591600 SLC4A1APQ9BWU0 796 aaKnown RBP23.13■■□□□ 1.29
APOC4-201ENST00000591600 PRAG1Q86YV5 1406 aa23.12■■□□□ 1.29
APOC4-201ENST00000591600 SETD5Q9C0A6 1442 aa23.12■■□□□ 1.29
APOC4-201ENST00000591600 PTCH1Q13635 1447 aa23.11■■□□□ 1.29
APOC4-201ENST00000591600 ZNF772Q68DY9 489 aaPredicted RBP23.08■■□□□ 1.29
APOC4-201ENST00000591600 LAMC1P11047 1609 aa23.08■■□□□ 1.28
APOC4-201ENST00000591600 MEX3CQ5U5Q3 659 aaKnown RBP23.06■■□□□ 1.28
APOC4-201ENST00000591600 LRRC59Q96AG4 307 aaKnown RBP23.06■■□□□ 1.28
APOC4-201ENST00000591600 ROBO2Q9HCK4 1378 aa23.03■■□□□ 1.28
APOC4-201ENST00000591600 C1orf167Q5SNV9 1468 aa23.02■■□□□ 1.28
APOC4-201ENST00000591600 IFT172Q9UG01 1749 aa23.02■■□□□ 1.28
APOC4-201ENST00000591600 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
APOC4-201ENST00000591600 NUTM2BA6NNL0 878 aaPredicted RBP22.98■■□□□ 1.27
APOC4-201ENST00000591600 NUTM2EB1AL46 878 aaPredicted RBP22.98■■□□□ 1.27
APOC4-201ENST00000591600 NUTM2AQ8IVF1 878 aaPredicted RBP22.98■■□□□ 1.27
APOC4-201ENST00000591600 PNPLA6Q8IY17 1366 aa22.98■■□□□ 1.27
APOC4-201ENST00000591600 SPATA31E1Q6ZUB1 1445 aa22.98■■□□□ 1.27
APOC4-201ENST00000591600 FOXD1Q16676 465 aa22.97■■□□□ 1.27
APOC4-201ENST00000591600 ACIN1Q9UKV3 1341 aaKnown RBP22.97■■□□□ 1.27
APOC4-201ENST00000591600 DDX17Q92841 729 aaKnown RBP22.96■■□□□ 1.27
APOC4-201ENST00000591600 MPHOSPH9Q99550 1183 aa22.96■■□□□ 1.27
APOC4-201ENST00000591600 ANKRD30BQ9BXX2 1392 aa22.95■■□□□ 1.26
APOC4-201ENST00000591600 CDK12Q9NYV4 1490 aaPredicted RBP22.95■■□□□ 1.26
APOC4-201ENST00000591600 CDC42BPGQ6DT37 1551 aa22.94■■□□□ 1.26
APOC4-201ENST00000591600 SOS2Q07890 1332 aaPredicted RBP22.94■■□□□ 1.26
APOC4-201ENST00000591600 RXRBP28702 533 aa22.94■■□□□ 1.26
APOC4-201ENST00000591600 AFF2P51816 1311 aa22.93■■□□□ 1.26
APOC4-201ENST00000591600 ADGRF5Q8IZF2 1346 aa22.93■■□□□ 1.26
APOC4-201ENST00000591600 TECPR2O15040 1411 aa22.92■■□□□ 1.26
APOC4-201ENST00000591600 KNDC1Q76NI1 1749 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms