RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 CHD2O14647 1828 aaKnown RBP15.47■□□□□ 0.07
RETREG3-211ENST00000591547 MSH6P52701 1360 aa15.47■□□□□ 0.07
RETREG3-211ENST00000591547 LRP6O75581 1613 aa15.46■□□□□ 0.07
RETREG3-211ENST00000591547 COL16A1Q07092 1604 aaPredicted RBP15.46■□□□□ 0.07
RETREG3-211ENST00000591547 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.07
RETREG3-211ENST00000591547 JCADQ9P266 1359 aa15.46■□□□□ 0.07
RETREG3-211ENST00000591547 GCC2Q8IWJ2 1684 aa15.44■□□□□ 0.06
RETREG3-211ENST00000591547 TRIM52Q96A61 297 aa15.44■□□□□ 0.06
RETREG3-211ENST00000591547 NUTM2DQ5VT03 806 aaPredicted RBP15.43■□□□□ 0.06
RETREG3-211ENST00000591547 ZFYVE9O95405 1425 aa15.42■□□□□ 0.06
RETREG3-211ENST00000591547 FGD6Q6ZV73 1430 aa15.42■□□□□ 0.06
RETREG3-211ENST00000591547 ANKRD30AQ9BXX3 1397 aa15.41■□□□□ 0.06
RETREG3-211ENST00000591547 UPF1Q92900 1129 aaKnown RBP eCLIP15.41■□□□□ 0.06
RETREG3-211ENST00000591547 RIMS2Q9UQ26 1411 aa15.41■□□□□ 0.06
RETREG3-211ENST00000591547 MEX3CQ5U5Q3 659 aaKnown RBP15.4■□□□□ 0.06
RETREG3-211ENST00000591547 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.4■□□□□ 0.06
RETREG3-211ENST00000591547 TMEM131LA2VDJ0 1609 aa15.39■□□□□ 0.05
RETREG3-211ENST00000591547 PLEKHG1Q9ULL1 1385 aa15.39■□□□□ 0.05
RETREG3-211ENST00000591547 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
RETREG3-211ENST00000591547 C14orf37Q86TY3 774 aa15.39■□□□□ 0.05
RETREG3-211ENST00000591547 SLC52A1Q9NWF4 448 aa15.39■□□□□ 0.05
RETREG3-211ENST00000591547 CHGAP10645 457 aaKnown RBP15.38■□□□□ 0.05
RETREG3-211ENST00000591547 SHPRHQ149N8 1683 aa15.36■□□□□ 0.05
RETREG3-211ENST00000591547 NUTM2BA6NNL0 878 aaPredicted RBP15.36■□□□□ 0.05
RETREG3-211ENST00000591547 NUTM2EB1AL46 878 aaPredicted RBP15.36■□□□□ 0.05
RETREG3-211ENST00000591547 NUTM2AQ8IVF1 878 aaPredicted RBP15.36■□□□□ 0.05
RETREG3-211ENST00000591547 ADAMTS13Q76LX8 1427 aa15.35■□□□□ 0.05
RETREG3-211ENST00000591547 TBX22Q9Y458 520 aa15.35■□□□□ 0.05
RETREG3-211ENST00000591547 SPATA31A6Q5VVP1 1343 aa15.35■□□□□ 0.05
RETREG3-211ENST00000591547 AHDC1Q5TGY3 1603 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-211ENST00000591547 DIP2AQ14689 1571 aa15.33■□□□□ 0.05
RETREG3-211ENST00000591547 APLP2Q06481 763 aa15.33■□□□□ 0.04
RETREG3-211ENST00000591547 ZNF772Q68DY9 489 aaPredicted RBP15.33■□□□□ 0.04
RETREG3-211ENST00000591547 ADGRL2O95490 1459 aa15.33■□□□□ 0.04
RETREG3-211ENST00000591547 ATF3P18847 181 aa15.32■□□□□ 0.04
RETREG3-211ENST00000591547 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
RETREG3-211ENST00000591547 PTPRUQ92729 1446 aa15.32■□□□□ 0.04
RETREG3-211ENST00000591547 ANKRD50Q9ULJ7 1429 aa15.32■□□□□ 0.04
RETREG3-211ENST00000591547 RPRD2Q5VT52 1461 aaKnown RBP15.32■□□□□ 0.04
RETREG3-211ENST00000591547 E9PCH4 1651 aa15.32■□□□□ 0.04
RETREG3-211ENST00000591547 RXRBP28702 533 aa15.31■□□□□ 0.04
RETREG3-211ENST00000591547 BRINP3Q76B58 766 aa15.31■□□□□ 0.04
RETREG3-211ENST00000591547 C19orf44Q9H6X5 657 aa15.31■□□□□ 0.04
RETREG3-211ENST00000591547 CADPS2Q86UW7 1296 aa15.3■□□□□ 0.04
RETREG3-211ENST00000591547 NCOA3Q9Y6Q9 1424 aa15.29■□□□□ 0.04
RETREG3-211ENST00000591547 AFF2P51816 1311 aa15.29■□□□□ 0.04
RETREG3-211ENST00000591547 HDGFP51858 240 aaKnown RBP15.29■□□□□ 0.04
RETREG3-211ENST00000591547 DDX17Q92841 729 aaKnown RBP15.29■□□□□ 0.04
RETREG3-211ENST00000591547 AMOTL2Q9Y2J4 779 aa15.29■□□□□ 0.04
RETREG3-211ENST00000591547 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.27■□□□□ 0.04
RETREG3-211ENST00000591547 UNC13BO14795 1591 aa15.27■□□□□ 0.03
RETREG3-211ENST00000591547 TRPM2O94759 1503 aa15.26■□□□□ 0.03
RETREG3-211ENST00000591547 ASXL1Q8IXJ9 1541 aa15.26■□□□□ 0.03
RETREG3-211ENST00000591547 NHSL1Q5SYE7 1610 aa15.25■□□□□ 0.03
RETREG3-211ENST00000591547 NRXN3Q9Y4C0 1643 aa15.25■□□□□ 0.03
RETREG3-211ENST00000591547 C8orf37Q96NL8 207 aa15.24■□□□□ 0.03
RETREG3-211ENST00000591547 RGS12O14924 1447 aa15.24■□□□□ 0.03
RETREG3-211ENST00000591547 PIK3R4Q99570 1358 aa15.24■□□□□ 0.03
RETREG3-211ENST00000591547 MST1RQ04912 1400 aa15.23■□□□□ 0.03
RETREG3-211ENST00000591547 XRN1Q8IZH2 1706 aaKnown RBP15.23■□□□□ 0.03
RETREG3-211ENST00000591547 CDK12Q9NYV4 1490 aaPredicted RBP15.22■□□□□ 0.03
RETREG3-211ENST00000591547 QTRT2Q9H974 415 aaKnown RBP15.22■□□□□ 0.03
RETREG3-211ENST00000591547 IQGAP3Q86VI3 1631 aa15.21■□□□□ 0.03
RETREG3-211ENST00000591547 SETD5Q9C0A6 1442 aa15.21■□□□□ 0.03
RETREG3-211ENST00000591547 METP08581 1390 aa15.2■□□□□ 0.02
RETREG3-211ENST00000591547 ADAMTS2O95450 1211 aa15.19■□□□□ 0.02
RETREG3-211ENST00000591547 NALCNQ8IZF0 1738 aa15.19■□□□□ 0.02
RETREG3-211ENST00000591547 PNPLA6Q8IY17 1366 aa15.19■□□□□ 0.02
RETREG3-211ENST00000591547 LRRC59Q96AG4 307 aaKnown RBP15.18■□□□□ 0.02
RETREG3-211ENST00000591547 DCCP43146 1447 aa15.17■□□□□ 0.02
RETREG3-211ENST00000591547 SRCAPQ6ZRS2 3230 aa15.17■□□□□ 0.02
RETREG3-211ENST00000591547 NUP155O75694 1391 aa15.17■□□□□ 0.02
RETREG3-211ENST00000591547 RBM6P78332 1123 aaKnown RBP15.17■□□□□ 0.02
RETREG3-211ENST00000591547 SETBP1Q9Y6X0 1596 aa15.16■□□□□ 0.02
RETREG3-211ENST00000591547 ITGAEP38570 1179 aa15.16■□□□□ 0.02
RETREG3-211ENST00000591547 ZNF326Q5BKZ1 582 aaKnown RBP15.16■□□□□ 0.02
RETREG3-211ENST00000591547 NGLY1Q96IV0 654 aa15.15■□□□□ 0.02
RETREG3-211ENST00000591547 SPHKAPQ2M3C7 1700 aa15.14■□□□□ 0.01
RETREG3-211ENST00000591547 ADGRL3Q9HAR2 1447 aa15.13■□□□□ 0.01
RETREG3-211ENST00000591547 ORAI2Q96SN7 254 aa15.12■□□□□ 0.01
RETREG3-211ENST00000591547 C1orf167Q5SNV9 1468 aa15.11■□□□□ 0.01
RETREG3-211ENST00000591547 CLTCL1P53675 1640 aa15.1■□□□□ 0.01
RETREG3-211ENST00000591547 USP21Q9UK80 565 aa15.1■□□□□ 0.01
RETREG3-211ENST00000591547 NEXMIFQ5QGS0 1516 aa15.1■□□□□ 0.01
RETREG3-211ENST00000591547 ROCK1Q13464 1354 aa15.1■□□□□ 0.01
RETREG3-211ENST00000591547 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
RETREG3-211ENST00000591547 LAMC1P11047 1609 aa15.07■□□□□ 0
RETREG3-211ENST00000591547 ATAD2Q6PL18 1390 aa15.07■□□□□ 0
RETREG3-211ENST00000591547 ROBO2Q9HCK4 1378 aa15.07■□□□□ 0
RETREG3-211ENST00000591547 SOS2Q07890 1332 aaPredicted RBP15.06■□□□□ 0
RETREG3-211ENST00000591547 EP400Q96L91 3159 aa15.06■□□□□ 0
RETREG3-211ENST00000591547 TRPC5Q9UL62 973 aaPredicted RBP15.05■□□□□ -0
RETREG3-211ENST00000591547 KIF1BO60333 1816 aa15.04■□□□□ -0
RETREG3-211ENST00000591547 ATRNO75882 1429 aa15.04■□□□□ -0
RETREG3-211ENST00000591547 FNBP4Q8N3X1 1017 aaPredicted RBP15.04■□□□□ -0
RETREG3-211ENST00000591547 XPCQ01831 940 aaPredicted RBP15.03■□□□□ -0
RETREG3-211ENST00000591547 COL22A1Q8NFW1 1626 aaPredicted RBP15.03■□□□□ -0
RETREG3-211ENST00000591547 ZRANB1Q9UGI0 708 aa15.02■□□□□ -0
RETREG3-211ENST00000591547 PTCH1Q13635 1447 aa15.01□□□□□ -0.01
RETREG3-211ENST00000591547 BCL9LQ86UU0 1499 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms